RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SLC34A2O95436 690 aa17.46■□□□□ 0.39
SGCE-203ENST00000425444 TGFB2P61812 414 aa17.46■□□□□ 0.39
SGCE-203ENST00000425444 SMARCC1Q92922 1105 aaPredicted RBP17.46■□□□□ 0.39
SGCE-203ENST00000425444 INSRP06213 1382 aa17.45■□□□□ 0.38
SGCE-203ENST00000425444 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
SGCE-203ENST00000425444 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
SGCE-203ENST00000425444 PANK3Q9H999 370 aa17.45■□□□□ 0.38
SGCE-203ENST00000425444 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
SGCE-203ENST00000425444 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
SGCE-203ENST00000425444 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
SGCE-203ENST00000425444 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
SGCE-203ENST00000425444 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
SGCE-203ENST00000425444 RRAGCQ9HB90 399 aa17.44■□□□□ 0.38
SGCE-203ENST00000425444 KCPQ6ZWJ8 1503 aa17.43■□□□□ 0.38
SGCE-203ENST00000425444 NBPF6Q5VWK0 638 aa17.43■□□□□ 0.38
SGCE-203ENST00000425444 NBPF4Q96M43 638 aa17.43■□□□□ 0.38
SGCE-203ENST00000425444 GNPATO15228 680 aa17.42■□□□□ 0.38
SGCE-203ENST00000425444 TATP17735 454 aaPredicted RBP17.42■□□□□ 0.38
SGCE-203ENST00000425444 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
SGCE-203ENST00000425444 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
SGCE-203ENST00000425444 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
SGCE-203ENST00000425444 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
SGCE-203ENST00000425444 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
SGCE-203ENST00000425444 KIF13BQ9NQT8 1826 aa17.42■□□□□ 0.38
SGCE-203ENST00000425444 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
SGCE-203ENST00000425444 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
SGCE-203ENST00000425444 DPEP1P16444 411 aa17.41■□□□□ 0.38
SGCE-203ENST00000425444 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
SGCE-203ENST00000425444 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
SGCE-203ENST00000425444 SIK1P57059 783 aa17.39■□□□□ 0.37
SGCE-203ENST00000425444 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
SGCE-203ENST00000425444 ITGB4P16144 1822 aa17.38■□□□□ 0.37
SGCE-203ENST00000425444 PIGBQ92521 554 aa17.38■□□□□ 0.37
SGCE-203ENST00000425444 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
SGCE-203ENST00000425444 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
SGCE-203ENST00000425444 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
SGCE-203ENST00000425444 CYP27B1O15528 508 aa17.37■□□□□ 0.37
SGCE-203ENST00000425444 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
SGCE-203ENST00000425444 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
SGCE-203ENST00000425444 WASHC2AQ641Q2 1341 aa17.37■□□□□ 0.37
SGCE-203ENST00000425444 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
SGCE-203ENST00000425444 NLGN1Q8N2Q7 840 aa17.36■□□□□ 0.37
SGCE-203ENST00000425444 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
SGCE-203ENST00000425444 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
SGCE-203ENST00000425444 ITPK1Q13572 414 aa17.35■□□□□ 0.37
SGCE-203ENST00000425444 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
SGCE-203ENST00000425444 KCNA3P22001 575 aa17.34■□□□□ 0.37
SGCE-203ENST00000425444 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
SGCE-203ENST00000425444 TRAPPC3LQ5T215 181 aa17.34■□□□□ 0.37
SGCE-203ENST00000425444 PIM2Q9P1W9 311 aa17.34■□□□□ 0.37
SGCE-203ENST00000425444 ARFGEF1Q9Y6D6 1849 aa17.34■□□□□ 0.37
SGCE-203ENST00000425444 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
SGCE-203ENST00000425444 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
SGCE-203ENST00000425444 DCAF5Q96JK2 942 aa17.32■□□□□ 0.36
SGCE-203ENST00000425444 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
SGCE-203ENST00000425444 RTCBQ9Y3I0 505 aaKnown RBP17.32■□□□□ 0.36
SGCE-203ENST00000425444 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
SGCE-203ENST00000425444 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
SGCE-203ENST00000425444 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
SGCE-203ENST00000425444 EYA1Q99502 592 aa17.3■□□□□ 0.36
SGCE-203ENST00000425444 TMOD3Q9NYL9 352 aa17.3■□□□□ 0.36
SGCE-203ENST00000425444 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
SGCE-203ENST00000425444 SBF1O95248 1867 aa17.29■□□□□ 0.36
SGCE-203ENST00000425444 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
SGCE-203ENST00000425444 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
SGCE-203ENST00000425444 GYS1P13807 737 aa17.28■□□□□ 0.36
SGCE-203ENST00000425444 RFC4P35249 363 aa17.28■□□□□ 0.36
SGCE-203ENST00000425444 NKX1-1Q15270 411 aaPredicted RBP17.28■□□□□ 0.36
SGCE-203ENST00000425444 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
SGCE-203ENST00000425444 ADRA2BP18089 450 aa17.26■□□□□ 0.35
SGCE-203ENST00000425444 PCDH10Q9P2E7 1040 aa17.26■□□□□ 0.35
SGCE-203ENST00000425444 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
SGCE-203ENST00000425444 GLTPD2A6NH11 291 aa17.25■□□□□ 0.35
SGCE-203ENST00000425444 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
SGCE-203ENST00000425444 CC2D1BQ5T0F9 858 aaKnown RBP17.25■□□□□ 0.35
SGCE-203ENST00000425444 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
SGCE-203ENST00000425444 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
SGCE-203ENST00000425444 FOXN1O15353 648 aa17.24■□□□□ 0.35
SGCE-203ENST00000425444 CHRNA5P30532 468 aa17.24■□□□□ 0.35
SGCE-203ENST00000425444 RASSF7Q02833 373 aa17.24■□□□□ 0.35
SGCE-203ENST00000425444 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
SGCE-203ENST00000425444 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
SGCE-203ENST00000425444 PRDM10Q9NQV6 1147 aa17.23■□□□□ 0.35
SGCE-203ENST00000425444 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
SGCE-203ENST00000425444 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
SGCE-203ENST00000425444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■□□□□ 8.1
SGCE-203ENST00000425444 RPS6KA4O75676 772 aa17.21■□□□□ 0.35
SGCE-203ENST00000425444 LMNB1P20700 586 aa17.21■□□□□ 0.35
SGCE-203ENST00000425444 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
SGCE-203ENST00000425444 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
SGCE-203ENST00000425444 AIDAQ96BJ3 306 aa17.2■□□□□ 0.34
SGCE-203ENST00000425444 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
SGCE-203ENST00000425444 PHKG2P15735 406 aa17.19■□□□□ 0.34
SGCE-203ENST00000425444 CTCFP49711 727 aaPredicted RBP17.19■□□□□ 0.34
SGCE-203ENST00000425444 MTHFSP49914 203 aa17.19■□□□□ 0.34
SGCE-203ENST00000425444 DDR1Q08345 913 aa17.19■□□□□ 0.34
SGCE-203ENST00000425444 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
SGCE-203ENST00000425444 CNTNAP4Q9C0A0 1308 aa17.19■□□□□ 0.34
SGCE-203ENST00000425444 KDRP35968 1356 aa17.18■□□□□ 0.34
SGCE-203ENST00000425444 FKBP8Q14318 412 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms