RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 DNAJC2Q99543 621 aaKnown RBP16.32■□□□□ 0.2
SREBF2-202ENST00000424354 TET3O43151 1660 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
SREBF2-202ENST00000424354 IQCEQ6IPM2 695 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 SPATA32Q96LK8 384 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
SREBF2-202ENST00000424354 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
SREBF2-202ENST00000424354 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
SREBF2-202ENST00000424354 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
SREBF2-202ENST00000424354 ABCC3O15438 1527 aa16.31■□□□□ 0.2
SREBF2-202ENST00000424354 ERVK-7P63135 1459 aa16.31■□□□□ 0.2
SREBF2-202ENST00000424354 EFCAB6Q5THR3 1501 aa16.3■□□□□ 0.2
SREBF2-202ENST00000424354 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
SREBF2-202ENST00000424354 STIM1Q13586 685 aa16.29■□□□□ 0.2
SREBF2-202ENST00000424354 CCDC181Q5TID7 509 aa16.29■□□□□ 0.2
SREBF2-202ENST00000424354 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
SREBF2-202ENST00000424354 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
SREBF2-202ENST00000424354 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 CDK5RAP3Q96JB5 506 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 NUTM2GQ5VZR2 741 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 SLFN5Q08AF3 891 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 BLOC1S2Q6QNY1 142 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
SREBF2-202ENST00000424354 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
SREBF2-202ENST00000424354 PRKCSHP14314 528 aaPredicted RBP16.28■□□□□ 0.2
SREBF2-202ENST00000424354 MPNDQ8N594 471 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 UBXN4Q92575 508 aa16.28■□□□□ 0.2
SREBF2-202ENST00000424354 SYCE3A1L190 88 aa16.27■□□□□ 0.2
SREBF2-202ENST00000424354 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
SREBF2-202ENST00000424354 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.2
SREBF2-202ENST00000424354 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
SREBF2-202ENST00000424354 TMEM2Q9UHN6 1383 aa16.27■□□□□ 0.2
SREBF2-202ENST00000424354 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.19
SREBF2-202ENST00000424354 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.19
SREBF2-202ENST00000424354 GBP3Q9H0R5 595 aa16.27■□□□□ 0.19
SREBF2-202ENST00000424354 SLC3A2P08195 630 aaKnown RBP16.27■□□□□ 0.19
SREBF2-202ENST00000424354 KRT32Q14532 448 aa16.27■□□□□ 0.19
SREBF2-202ENST00000424354 ZFYVE27Q5T4F4 411 aa16.27■□□□□ 0.19
SREBF2-202ENST00000424354 NPHP4O75161 1426 aaPredicted RBP16.26■□□□□ 0.19
SREBF2-202ENST00000424354 ZRSR2Q15696 482 aaKnown RBP16.26■□□□□ 0.19
SREBF2-202ENST00000424354 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
SREBF2-202ENST00000424354 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.194e-7■□□□□ 11.3
SREBF2-202ENST00000424354 DEF6Q9H4E7 631 aa16.26■□□□□ 0.19
SREBF2-202ENST00000424354 STK3Q13188 491 aa16.26■□□□□ 0.19
SREBF2-202ENST00000424354 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
SREBF2-202ENST00000424354 TMCO3Q6UWJ1 677 aa16.26■□□□□ 0.19
SREBF2-202ENST00000424354 UNC13BO14795 1591 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 KCNA6P17658 529 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 SKIDA1Q1XH10 827 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 KIF13AQ9H1H9 1805 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 PTPRMP28827 1452 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 CDKL5O76039 1030 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
SREBF2-202ENST00000424354 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 ABCA6Q8N139 1617 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 MCM5P33992 734 aa16.25■□□□□ 0.19
SREBF2-202ENST00000424354 CCDC183Q5T5S1 534 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 FILIP1Q7Z7B0 1213 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 PLEKHG1Q9ULL1 1385 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 FYB1O15117 783 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 SYCP1Q15431 976 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
SREBF2-202ENST00000424354 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
SREBF2-202ENST00000424354 PLEKHO1Q53GL0 409 aaPredicted RBP16.23■□□□□ 0.19
SREBF2-202ENST00000424354 KDM4AO75164 1064 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 FAM177A1Q8N128 213 aaPredicted RBP16.23■□□□□ 0.19
SREBF2-202ENST00000424354 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
SREBF2-202ENST00000424354 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
SREBF2-202ENST00000424354 NLRP6P59044 892 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 RICTORQ6R327 1708 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 CCDC102AQ96A19 550 aa16.23■□□□□ 0.19
SREBF2-202ENST00000424354 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
SREBF2-202ENST00000424354 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
SREBF2-202ENST00000424354 ERICH4A6NGS2 130 aa16.22■□□□□ 0.19
SREBF2-202ENST00000424354 ZSCAN12O43309 604 aa16.22■□□□□ 0.19
SREBF2-202ENST00000424354 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
SREBF2-202ENST00000424354 KIF18AQ8NI77 898 aa16.21■□□□□ 0.19
SREBF2-202ENST00000424354 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
SREBF2-202ENST00000424354 TRPM2O94759 1503 aa16.21■□□□□ 0.19
SREBF2-202ENST00000424354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.21■□□□□ 0.196e-7■■■■■ 64
SREBF2-202ENST00000424354 NOS1P29475 1434 aa16.21■□□□□ 0.18
SREBF2-202ENST00000424354 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.18
SREBF2-202ENST00000424354 NACAP1Q9BZK3 213 aa16.21■□□□□ 0.18
SREBF2-202ENST00000424354 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.18
SREBF2-202ENST00000424354 SFPQP23246 707 aaKnown RBP eCLIP16.2■□□□□ 0.18
SREBF2-202ENST00000424354 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
SREBF2-202ENST00000424354 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
SREBF2-202ENST00000424354 NCKAP5LQ9HCH0 1330 aa16.2■□□□□ 0.18
SREBF2-202ENST00000424354 KRT18P05783 430 aaKnown RBP16.2■□□□□ 0.18
SREBF2-202ENST00000424354 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms