RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
MSH5-206ENST00000423982 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 CCDC173Q0VFZ6 552 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 HOXC9P31274 260 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 CHRNA2Q15822 529 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 PPP1R9BQ96SB3 815 aa17.68■□□□□ 0.42
MSH5-206ENST00000423982 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
MSH5-206ENST00000423982 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
MSH5-206ENST00000423982 PKNOX2Q96KN3 472 aa17.67■□□□□ 0.42
MSH5-206ENST00000423982 MARF1Q9Y4F3 1742 aaKnown RBP17.67■□□□□ 0.42
MSH5-206ENST00000423982 ZGPATQ8N5A5 531 aaKnown RBP17.67■□□□□ 0.42
MSH5-206ENST00000423982 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
MSH5-206ENST00000423982 FLT4P35916 1363 aa17.67■□□□□ 0.42
MSH5-206ENST00000423982 PXDNQ92626 1479 aa17.67■□□□□ 0.42
MSH5-206ENST00000423982 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
MSH5-206ENST00000423982 TWISTNBQ3B726 338 aaPredicted RBP17.66■□□□□ 0.42
MSH5-206ENST00000423982 ABCC4O15439 1325 aa17.66■□□□□ 0.42
MSH5-206ENST00000423982 SPATA31A3Q5VYP0 1347 aa17.66■□□□□ 0.42
MSH5-206ENST00000423982 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
MSH5-206ENST00000423982 TNS3Q68CZ2 1445 aa17.65■□□□□ 0.42
MSH5-206ENST00000423982 SBNO1A3KN83 1393 aa17.65■□□□□ 0.42
MSH5-206ENST00000423982 SMARCA5O60264 1052 aaPredicted RBP17.65■□□□□ 0.42
MSH5-206ENST00000423982 BRPF1P55201 1214 aaPredicted RBP17.65■□□□□ 0.42
MSH5-206ENST00000423982 ZSCAN30Q86W11 494 aa17.65■□□□□ 0.42
MSH5-206ENST00000423982 ZSCAN23Q3MJ62 389 aa17.65■□□□□ 0.42
MSH5-206ENST00000423982 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
MSH5-206ENST00000423982 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
MSH5-206ENST00000423982 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
MSH5-206ENST00000423982 RBSNQ9H1K0 784 aa17.65■□□□□ 0.42
MSH5-206ENST00000423982 UBAP1LF5GYI3 381 aa17.64■□□□□ 0.42
MSH5-206ENST00000423982 LMBRD1Q9NUN5 540 aa17.64■□□□□ 0.42
MSH5-206ENST00000423982 KRT24Q2M2I5 525 aa17.64■□□□□ 0.41
MSH5-206ENST00000423982 CLEC17AQ6ZS10 378 aa17.63■□□□□ 0.41
MSH5-206ENST00000423982 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
MSH5-206ENST00000423982 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
MSH5-206ENST00000423982 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
MSH5-206ENST00000423982 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
MSH5-206ENST00000423982 PTMSP20962 102 aa17.63■□□□□ 0.41
MSH5-206ENST00000423982 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
MSH5-206ENST00000423982 PRIM1P49642 420 aaKnown RBP17.63■□□□□ 0.41
MSH5-206ENST00000423982 RBM10P98175 930 aaKnown RBP17.63■□□□□ 0.41
MSH5-206ENST00000423982 TTC22Q5TAA0 569 aa17.63■□□□□ 0.41
MSH5-206ENST00000423982 SOS2Q07890 1332 aaPredicted RBP17.62■□□□□ 0.41
MSH5-206ENST00000423982 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
MSH5-206ENST00000423982 RABEP1Q15276 862 aa17.62■□□□□ 0.41
MSH5-206ENST00000423982 EYA1Q99502 592 aa17.62■□□□□ 0.41
MSH5-206ENST00000423982 ANP32BQ92688 251 aaKnown RBP17.62■□□□□ 0.41
MSH5-206ENST00000423982 NFAT5O94916 1531 aa17.62■□□□□ 0.41
MSH5-206ENST00000423982 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
MSH5-206ENST00000423982 CYP2E1P05181 493 aaPredicted RBP17.61■□□□□ 0.41
MSH5-206ENST00000423982 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
MSH5-206ENST00000423982 GNAI1P63096 354 aa17.61■□□□□ 0.41
MSH5-206ENST00000423982 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
MSH5-206ENST00000423982 GPT2Q8TD30 523 aa17.61■□□□□ 0.41
MSH5-206ENST00000423982 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
MSH5-206ENST00000423982 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
MSH5-206ENST00000423982 ZDHHC9Q9Y397 364 aa17.61■□□□□ 0.41
MSH5-206ENST00000423982 TPM2P07951 284 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 SDSP20132 328 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 DCTPP1Q9H773 170 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 ROBO1Q9Y6N7 1651 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 LTN1O94822 1766 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 ALS2Q96Q42 1657 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 ZNF445P59923 1031 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 IP6K1Q92551 441 aa17.6■□□□□ 0.41
MSH5-206ENST00000423982 OFD1O75665 1012 aa17.59■□□□□ 0.41
MSH5-206ENST00000423982 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
MSH5-206ENST00000423982 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
MSH5-206ENST00000423982 TOM1O60784 492 aa17.59■□□□□ 0.41
MSH5-206ENST00000423982 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.59■□□□□ 0.41
MSH5-206ENST00000423982 R3HCC1Q9Y3T6 440 aaKnown RBP17.58■□□□□ 0.41
MSH5-206ENST00000423982 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
MSH5-206ENST00000423982 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
MSH5-206ENST00000423982 NUCB2P80303 420 aa17.57■□□□□ 0.4
MSH5-206ENST00000423982 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
MSH5-206ENST00000423982 ANKRD24Q8TF21 1146 aa17.57■□□□□ 0.4
MSH5-206ENST00000423982 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
MSH5-206ENST00000423982 PRDM11Q9NQV5 511 aa17.57■□□□□ 0.4
MSH5-206ENST00000423982 API5Q9BZZ5 524 aaKnown RBP17.56■□□□□ 0.4
MSH5-206ENST00000423982 DLG5Q8TDM6 1919 aa17.56■□□□□ 0.4
MSH5-206ENST00000423982 CSB-PGBD3P0DP91 1061 aa17.56■□□□□ 0.4
MSH5-206ENST00000423982 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
MSH5-206ENST00000423982 TMEM63CQ9P1W3 806 aa17.56■□□□□ 0.4
MSH5-206ENST00000423982 SYCE3A1L190 88 aa17.56■□□□□ 0.4
MSH5-206ENST00000423982 INTS3Q68E01 1043 aaKnown RBP17.56■□□□□ 0.4
MSH5-206ENST00000423982 SLIT3O75094 1523 aa17.55■□□□□ 0.4
MSH5-206ENST00000423982 TSHZ3Q63HK5 1081 aa17.55■□□□□ 0.4
MSH5-206ENST00000423982 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
MSH5-206ENST00000423982 ATP10DQ9P241 1426 aa17.55■□□□□ 0.4
MSH5-206ENST00000423982 MEIS3Q99687 375 aa17.54■□□□□ 0.4
MSH5-206ENST00000423982 NUTM2BA6NNL0 878 aaPredicted RBP17.54■□□□□ 0.4
MSH5-206ENST00000423982 NUTM2EB1AL46 878 aaPredicted RBP17.54■□□□□ 0.4
MSH5-206ENST00000423982 CEP85Q6P2H3 762 aa17.54■□□□□ 0.4
MSH5-206ENST00000423982 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
MSH5-206ENST00000423982 NUTM2AQ8IVF1 878 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms