RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 CCDC27Q2M243 656 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 NME9Q86XW9 330 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 CARD10Q9BWT7 1032 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 LTBP1Q14766 1721 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 ZBTB7CA1YPR0 619 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 ESPNB1AK53 854 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 MAP7D2Q96T17 732 aa6.18□□□□□ -1.42
ITGB1-205ENST00000423113 CDCA7Q9BWT1 371 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-205ENST00000423113 RGS17Q9UGC6 210 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-205ENST00000423113 PSME4Q14997 1843 aa6.17□□□□□ -1.42
ITGB1-205ENST00000423113 LAMB1P07942 1786 aa6.17□□□□□ -1.42
ITGB1-205ENST00000423113 ARFGEF1Q9Y6D6 1849 aa6.17□□□□□ -1.42
ITGB1-205ENST00000423113 SPRYD3Q8NCJ5 442 aa6.17□□□□□ -1.42
ITGB1-205ENST00000423113 BACH2Q9BYV9 841 aa6.17□□□□□ -1.42
ITGB1-205ENST00000423113 R3HCC1Q9Y3T6 440 aaKnown RBP6.16□□□□□ -1.42
ITGB1-205ENST00000423113 E9PSI1 815 aa6.16□□□□□ -1.42
ITGB1-205ENST00000423113 CHMP4AQ9BY43 222 aa6.16□□□□□ -1.42
ITGB1-205ENST00000423113 COG3Q96JB2 828 aa6.16□□□□□ -1.42
ITGB1-205ENST00000423113 BABAM1Q9NWV8 329 aa6.16□□□□□ -1.42
ITGB1-205ENST00000423113 DUOX1Q9NRD9 1551 aa6.16□□□□□ -1.42
ITGB1-205ENST00000423113 HTATSF1O43719 755 aaKnown RBP6.15□□□□□ -1.42
ITGB1-205ENST00000423113 IPO4Q8TEX9 1081 aaKnown RBP6.15□□□□□ -1.42
ITGB1-205ENST00000423113 ANKRD31Q8N7Z5 1873 aa6.15□□□□□ -1.42
ITGB1-205ENST00000423113 FAM83GA6ND36 823 aa6.15□□□□□ -1.42
ITGB1-205ENST00000423113 FOXO3O43524 673 aa6.15□□□□□ -1.42
ITGB1-205ENST00000423113 EXOC6Q8TAG9 804 aa6.15□□□□□ -1.42
ITGB1-205ENST00000423113 PXDNLA1KZ92 1463 aa6.15□□□□□ -1.43
ITGB1-205ENST00000423113 AEBP1Q8IUX7 1158 aa6.15□□□□□ -1.43
ITGB1-205ENST00000423113 UNC5CLQ8IV45 518 aa6.15□□□□□ -1.43
ITGB1-205ENST00000423113 APPP05067 770 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 MS4A1P11836 297 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 NGDNQ8NEJ9 315 aaKnown RBP6.14□□□□□ -1.43
ITGB1-205ENST00000423113 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
ITGB1-205ENST00000423113 UPF2Q9HAU5 1272 aaKnown RBP6.14□□□□□ -1.43
ITGB1-205ENST00000423113 AXIN2Q9Y2T1 843 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 KNSTRNQ9Y448 316 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 SOS1Q07889 1333 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-205ENST00000423113 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
ITGB1-205ENST00000423113 NUDCQ9Y266 331 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 RGL2O15211 777 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 PMFBP1Q8TBY8 1022 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 PANK2Q9BZ23 570 aa6.14□□□□□ -1.43
ITGB1-205ENST00000423113 EIF4A2Q14240 407 aaKnown RBP6.13□□□□□ -1.43
ITGB1-205ENST00000423113 ABTB2Q8N961 1025 aa6.13□□□□□ -1.43
ITGB1-205ENST00000423113 IL16Q14005 1332 aa6.13□□□□□ -1.43
ITGB1-205ENST00000423113 ZRANB1Q9UGI0 708 aa6.13□□□□□ -1.43
ITGB1-205ENST00000423113 GTF2E1P29083 439 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-205ENST00000423113 ZNF772Q68DY9 489 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-205ENST00000423113 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-205ENST00000423113 ZNF771Q7L3S4 317 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-205ENST00000423113 RBM33Q96EV2 1170 aaKnown RBP6.13□□□□□ -1.43
ITGB1-205ENST00000423113 RIC1Q4ADV7 1423 aa6.13□□□□□ -1.43
ITGB1-205ENST00000423113 FCHSD2O94868 740 aa6.12□□□□□ -1.43
ITGB1-205ENST00000423113 SAFB2Q14151 953 aaKnown RBP eCLIP6.12□□□□□ -1.43
ITGB1-205ENST00000423113 TMC1Q8TDI8 760 aa6.12□□□□□ -1.43
ITGB1-205ENST00000423113 ZBED9Q6R2W3 1325 aa6.12□□□□□ -1.43
ITGB1-205ENST00000423113 DICER1Q9UPY3 1922 aaKnown RBP6.12□□□□□ -1.43
ITGB1-205ENST00000423113 COL11A2P13942 1736 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-205ENST00000423113 XRCC6P12956 609 aaKnown RBP eCLIP6.12□□□□□ -1.43
ITGB1-205ENST00000423113 MRE11P49959 708 aa6.12□□□□□ -1.43
ITGB1-205ENST00000423113 SMAP1Q8IYB5 467 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-205ENST00000423113 DDX17Q92841 729 aaKnown RBP6.12□□□□□ -1.43
ITGB1-205ENST00000423113 PRDM4Q9UKN5 801 aa6.12□□□□□ -1.43
ITGB1-205ENST00000423113 BRD2P25440 801 aaKnown RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 TNNT3P45378 269 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 FTSJ3Q8IY81 847 aaKnown RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 CGNQ9P2M7 1197 aaKnown RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 EP400Q96L91 3159 aa6.11□□□□□ -1.43
ITGB1-205ENST00000423113 PPP4R3BQ5MIZ7 849 aa6.11□□□□□ -1.43
ITGB1-205ENST00000423113 MTERF4Q7Z6M4 381 aaKnown RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 SKAP1Q86WV1 359 aa6.11□□□□□ -1.43
ITGB1-205ENST00000423113 PTMAP06454 111 aaKnown RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 ZNF853P0CG23 659 aa6.11□□□□□ -1.43
ITGB1-205ENST00000423113 ZFP91Q96JP5 570 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-205ENST00000423113 NLRP6P59044 892 aa6.1□□□□□ -1.43
ITGB1-205ENST00000423113 MAP3K5Q99683 1374 aa6.1□□□□□ -1.43
ITGB1-205ENST00000423113 UQCRHLA0A096LP55 91 aa6.1□□□□□ -1.43
ITGB1-205ENST00000423113 UQCRHP07919 91 aa6.1□□□□□ -1.43
ITGB1-205ENST00000423113 CBX1P83916 185 aa6.1□□□□□ -1.43
ITGB1-205ENST00000423113 MEX3CQ5U5Q3 659 aaKnown RBP6.1□□□□□ -1.43
ITGB1-205ENST00000423113 GGNBP2Q9H3C7 697 aa6.1□□□□□ -1.43
ITGB1-205ENST00000423113 AFF2P51816 1311 aa6.09□□□□□ -1.43
ITGB1-205ENST00000423113 CCDC184Q52MB2 194 aa6.09□□□□□ -1.43
ITGB1-205ENST00000423113 CFAP44Q96MT7 982 aa6.09□□□□□ -1.43
ITGB1-205ENST00000423113 EMILIN1Q9Y6C2 1016 aa6.09□□□□□ -1.43
ITGB1-205ENST00000423113 BRPF1P55201 1214 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-205ENST00000423113 IRX3P78415 501 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-205ENST00000423113 EYA1Q99502 592 aa6.09□□□□□ -1.43
ITGB1-205ENST00000423113 TRPC5Q9UL62 973 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-205ENST00000423113 PCDH11XQ9BZA7 1347 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 PCDH11YQ9BZA8 1340 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 MTHFSP49914 203 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 TMEM132AQ24JP5 1023 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 FAM161AQ3B820 660 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 MORC1Q86VD1 984 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 ANKRD24Q8TF21 1146 aa6.09□□□□□ -1.44
ITGB1-205ENST00000423113 GJD4Q96KN9 370 aaPredicted RBP6.09□□□□□ -1.44
ITGB1-205ENST00000423113 AMOTQ4VCS5 1084 aa6.08□□□□□ -1.44
ITGB1-205ENST00000423113 NBPF6Q5VWK0 638 aa6.08□□□□□ -1.44
ITGB1-205ENST00000423113 NBPF4Q96M43 638 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms