RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 PIP4K2AP48426 406 aaPredicted RBP17.73■□□□□ 0.43
CHRD-204ENST00000420973 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
CHRD-204ENST00000420973 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
CHRD-204ENST00000420973 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
CHRD-204ENST00000420973 TAF3Q5VWG9 929 aa17.72■□□□□ 0.43
CHRD-204ENST00000420973 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
CHRD-204ENST00000420973 KCNQ3O43525 872 aa17.72■□□□□ 0.43
CHRD-204ENST00000420973 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
CHRD-204ENST00000420973 GCP02774 474 aa17.71■□□□□ 0.43
CHRD-204ENST00000420973 NASPP49321 788 aaPredicted RBP17.71■□□□□ 0.43
CHRD-204ENST00000420973 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
CHRD-204ENST00000420973 CNPY4Q8N129 248 aa17.71■□□□□ 0.43
CHRD-204ENST00000420973 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
CHRD-204ENST00000420973 CCDC173Q0VFZ6 552 aa17.7■□□□□ 0.42
CHRD-204ENST00000420973 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
CHRD-204ENST00000420973 CHL1O00533 1208 aa17.69■□□□□ 0.42
CHRD-204ENST00000420973 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
CHRD-204ENST00000420973 TSC1Q92574 1164 aa17.69■□□□□ 0.42
CHRD-204ENST00000420973 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
CHRD-204ENST00000420973 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
CHRD-204ENST00000420973 PHAXQ9H814 394 aaKnown RBP17.68■□□□□ 0.42
CHRD-204ENST00000420973 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
CHRD-204ENST00000420973 TERF1P54274 439 aa17.68■□□□□ 0.42
CHRD-204ENST00000420973 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
CHRD-204ENST00000420973 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
CHRD-204ENST00000420973 DLC1Q96QB1 1528 aa17.68■□□□□ 0.42
CHRD-204ENST00000420973 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
CHRD-204ENST00000420973 ANKRD24Q8TF21 1146 aa17.67■□□□□ 0.42
CHRD-204ENST00000420973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
CHRD-204ENST00000420973 ZNF853P0CG23 659 aa17.67■□□□□ 0.42
CHRD-204ENST00000420973 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
CHRD-204ENST00000420973 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
CHRD-204ENST00000420973 OS9Q13438 667 aaPredicted RBP17.67■□□□□ 0.42
CHRD-204ENST00000420973 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
CHRD-204ENST00000420973 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
CHRD-204ENST00000420973 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
CHRD-204ENST00000420973 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
CHRD-204ENST00000420973 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
CHRD-204ENST00000420973 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
CHRD-204ENST00000420973 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
CHRD-204ENST00000420973 IL1RAPL2Q9NP60 686 aa17.66■□□□□ 0.42
CHRD-204ENST00000420973 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
CHRD-204ENST00000420973 FLIIQ13045 1269 aa17.65■□□□□ 0.42
CHRD-204ENST00000420973 CDC42BPGQ6DT37 1551 aa17.65■□□□□ 0.42
CHRD-204ENST00000420973 UBR1Q8IWV7 1749 aa17.65■□□□□ 0.42
CHRD-204ENST00000420973 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.65■□□□□ 0.42
CHRD-204ENST00000420973 REREQ9P2R6 1566 aa17.65■□□□□ 0.42
CHRD-204ENST00000420973 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
CHRD-204ENST00000420973 TPRNQ4KMQ1 711 aa17.65■□□□□ 0.42
CHRD-204ENST00000420973 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.42
CHRD-204ENST00000420973 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.42
CHRD-204ENST00000420973 MYL6BP14649 208 aa17.64■□□□□ 0.42
CHRD-204ENST00000420973 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.42
CHRD-204ENST00000420973 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.42
CHRD-204ENST00000420973 AXIN2Q9Y2T1 843 aa17.64■□□□□ 0.42
CHRD-204ENST00000420973 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
CHRD-204ENST00000420973 TRERF1Q96PN7 1200 aa17.64■□□□□ 0.41
CHRD-204ENST00000420973 TECPR2O15040 1411 aa17.64■□□□□ 0.41
CHRD-204ENST00000420973 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
CHRD-204ENST00000420973 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
CHRD-204ENST00000420973 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
CHRD-204ENST00000420973 MED14O60244 1454 aa17.63■□□□□ 0.41
CHRD-204ENST00000420973 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
CHRD-204ENST00000420973 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
CHRD-204ENST00000420973 TNNT3P45378 269 aaPredicted RBP17.63■□□□□ 0.41
CHRD-204ENST00000420973 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
CHRD-204ENST00000420973 MSH6P52701 1360 aa17.63■□□□□ 0.41
CHRD-204ENST00000420973 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
CHRD-204ENST00000420973 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
CHRD-204ENST00000420973 SASS6Q6UVJ0 657 aa17.62■□□□□ 0.41
CHRD-204ENST00000420973 CHPF2Q9P2E5 772 aa17.62■□□□□ 0.41
CHRD-204ENST00000420973 ISY1Q9ULR0 285 aaKnown RBP17.62■□□□□ 0.41
CHRD-204ENST00000420973 IP6K1Q92551 441 aa17.62■□□□□ 0.41
CHRD-204ENST00000420973 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
CHRD-204ENST00000420973 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
CHRD-204ENST00000420973 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
CHRD-204ENST00000420973 NUCB1Q02818 461 aa17.61■□□□□ 0.41
CHRD-204ENST00000420973 CSPP1Q1MSJ5 1256 aa17.61■□□□□ 0.41
CHRD-204ENST00000420973 DNAJC2Q99543 621 aaKnown RBP17.61■□□□□ 0.41
CHRD-204ENST00000420973 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
CHRD-204ENST00000420973 TRIM34Q9BYJ4 488 aa17.61■□□□□ 0.41
CHRD-204ENST00000420973 TBC1D2Q9BYX2 928 aa17.61■□□□□ 0.41
CHRD-204ENST00000420973 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
CHRD-204ENST00000420973 KIF20BQ96Q89 1820 aa17.6■□□□□ 0.41
CHRD-204ENST00000420973 PTMAP06454 111 aaKnown RBP17.6■□□□□ 0.41
CHRD-204ENST00000420973 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
CHRD-204ENST00000420973 KCNH5Q8NCM2 988 aa17.6■□□□□ 0.41
CHRD-204ENST00000420973 DDX54Q8TDD1 881 aaKnown RBP17.6■□□□□ 0.41
CHRD-204ENST00000420973 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
CHRD-204ENST00000420973 USP32Q8NFA0 1604 aa17.6■□□□□ 0.41
CHRD-204ENST00000420973 C3P01024 1663 aa17.6■□□□□ 0.41
CHRD-204ENST00000420973 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
CHRD-204ENST00000420973 FER1L4A9Z1Z3 1794 aa17.6■□□□□ 0.41
CHRD-204ENST00000420973 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
CHRD-204ENST00000420973 C19orf44Q9H6X5 657 aa17.59■□□□□ 0.41
CHRD-204ENST00000420973 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
CHRD-204ENST00000420973 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
CHRD-204ENST00000420973 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.41
CHRD-204ENST00000420973 HSCBQ8IWL3 235 aa17.58■□□□□ 0.41
CHRD-204ENST00000420973 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms