RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
AC004540.1-205ENST00000420774 ERVV-2B6SEH9 535 aa16.78■□□□□ 0.28
AC004540.1-205ENST00000420774 CABP4P57796 275 aa16.78■□□□□ 0.28
AC004540.1-205ENST00000420774 MCM10Q7L590 875 aa16.78■□□□□ 0.28
AC004540.1-205ENST00000420774 FAM9BQ8IZU0 186 aa16.78■□□□□ 0.28
AC004540.1-205ENST00000420774 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
AC004540.1-205ENST00000420774 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.28
AC004540.1-205ENST00000420774 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
AC004540.1-205ENST00000420774 PLSCR1O15162 318 aa16.76■□□□□ 0.27
AC004540.1-205ENST00000420774 PROM2Q8N271 834 aa16.76■□□□□ 0.27
AC004540.1-205ENST00000420774 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
AC004540.1-205ENST00000420774 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
AC004540.1-205ENST00000420774 ASAP1Q9ULH1 1129 aa16.76■□□□□ 0.27
AC004540.1-205ENST00000420774 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
AC004540.1-205ENST00000420774 TAF1LQ8IZX4 1826 aa16.75■□□□□ 0.27
AC004540.1-205ENST00000420774 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
AC004540.1-205ENST00000420774 KCNQ4P56696 695 aa16.75■□□□□ 0.27
AC004540.1-205ENST00000420774 RIPK4P57078 832 aa16.75■□□□□ 0.27
AC004540.1-205ENST00000420774 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
AC004540.1-205ENST00000420774 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
AC004540.1-205ENST00000420774 APAF1O14727 1248 aa16.74■□□□□ 0.27
AC004540.1-205ENST00000420774 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
AC004540.1-205ENST00000420774 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
AC004540.1-205ENST00000420774 ATG3Q9NT62 314 aa16.74■□□□□ 0.27
AC004540.1-205ENST00000420774 C5P01031 1676 aa16.73■□□□□ 0.27
AC004540.1-205ENST00000420774 TEFQ10587 303 aa16.72■□□□□ 0.27
AC004540.1-205ENST00000420774 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
AC004540.1-205ENST00000420774 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
AC004540.1-205ENST00000420774 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
AC004540.1-205ENST00000420774 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
AC004540.1-205ENST00000420774 TJP1Q07157 1748 aa16.71■□□□□ 0.27
AC004540.1-205ENST00000420774 HTATSF1O43719 755 aaKnown RBP16.71■□□□□ 0.27
AC004540.1-205ENST00000420774 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
AC004540.1-205ENST00000420774 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
AC004540.1-205ENST00000420774 SMARCC1Q92922 1105 aaPredicted RBP16.69■□□□□ 0.26
AC004540.1-205ENST00000420774 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
AC004540.1-205ENST00000420774 CCNL1Q9UK58 526 aaPredicted RBP16.69■□□□□ 0.26
AC004540.1-205ENST00000420774 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
AC004540.1-205ENST00000420774 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
AC004540.1-205ENST00000420774 KCNQ3O43525 872 aa16.68■□□□□ 0.26
AC004540.1-205ENST00000420774 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
AC004540.1-205ENST00000420774 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
AC004540.1-205ENST00000420774 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
AC004540.1-205ENST00000420774 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
AC004540.1-205ENST00000420774 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
AC004540.1-205ENST00000420774 LOC102724428A0A0B4J2F2 783 aa16.67■□□□□ 0.26
AC004540.1-205ENST00000420774 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
AC004540.1-205ENST00000420774 SIK1P57059 783 aa16.67■□□□□ 0.26
AC004540.1-205ENST00000420774 SALL2Q9Y467 1007 aaPredicted RBP16.67■□□□□ 0.26
AC004540.1-205ENST00000420774 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
AC004540.1-205ENST00000420774 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
AC004540.1-205ENST00000420774 ITPK1Q13572 414 aa16.66■□□□□ 0.26
AC004540.1-205ENST00000420774 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
AC004540.1-205ENST00000420774 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
AC004540.1-205ENST00000420774 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
AC004540.1-205ENST00000420774 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
AC004540.1-205ENST00000420774 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
AC004540.1-205ENST00000420774 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
AC004540.1-205ENST00000420774 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
AC004540.1-205ENST00000420774 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
AC004540.1-205ENST00000420774 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
AC004540.1-205ENST00000420774 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
AC004540.1-205ENST00000420774 ZNF496Q96IT1 587 aaPredicted RBP16.63■□□□□ 0.25
AC004540.1-205ENST00000420774 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
AC004540.1-205ENST00000420774 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
AC004540.1-205ENST00000420774 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
AC004540.1-205ENST00000420774 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
AC004540.1-205ENST00000420774 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
AC004540.1-205ENST00000420774 CASZ1Q86V15 1759 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 SMIM5Q71RC9 77 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 WWC1Q8IX03 1113 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 TSPYL4Q9UJ04 414 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 HEG1Q9ULI3 1381 aa16.6■□□□□ 0.25
AC004540.1-205ENST00000420774 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
AC004540.1-205ENST00000420774 CCDC27Q2M243 656 aa16.59■□□□□ 0.25
AC004540.1-205ENST00000420774 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
AC004540.1-205ENST00000420774 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
AC004540.1-205ENST00000420774 STK32BQ9NY57 414 aa16.59■□□□□ 0.25
AC004540.1-205ENST00000420774 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
AC004540.1-205ENST00000420774 CHL1O00533 1208 aa16.57■□□□□ 0.24
AC004540.1-205ENST00000420774 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 KRT24Q2M2I5 525 aa16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
AC004540.1-205ENST00000420774 PNPLA7Q6ZV29 1317 aa16.55■□□□□ 0.24
AC004540.1-205ENST00000420774 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
AC004540.1-205ENST00000420774 AK7Q96M32 723 aa16.55■□□□□ 0.24
AC004540.1-205ENST00000420774 TFCP2L1Q9NZI6 479 aa16.55■□□□□ 0.24
AC004540.1-205ENST00000420774 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 GNPATO15228 680 aa16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 PHF14O94880 888 aa16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 CYP19A1P11511 503 aaPredicted RBP16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms