RNA–Protein interactions for RNA: ENST00000420513.1

NBPF1-202, Transcript of NBPF member 1, humanhuman

TSL 3

Gene NBPF1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-202ENST00000420513 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
NBPF1-202ENST00000420513 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
NBPF1-202ENST00000420513 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
NBPF1-202ENST00000420513 MIA2Q96PC5 1412 aa11.28□□□□□ -0.6
NBPF1-202ENST00000420513 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
NBPF1-202ENST00000420513 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
NBPF1-202ENST00000420513 TLL2Q9Y6L7 1015 aa11.28□□□□□ -0.6
NBPF1-202ENST00000420513 XIRP1Q702N8 1843 aaKnown RBP11.28□□□□□ -0.6
NBPF1-202ENST00000420513 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
NBPF1-202ENST00000420513 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
NBPF1-202ENST00000420513 LILRB3O75022 631 aa11.27□□□□□ -0.61
NBPF1-202ENST00000420513 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
NBPF1-202ENST00000420513 CFDP1Q9UEE9 299 aaPredicted RBP11.27□□□□□ -0.61
NBPF1-202ENST00000420513 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
NBPF1-202ENST00000420513 FYCO1Q9BQS8 1478 aa11.26□□□□□ -0.61
NBPF1-202ENST00000420513 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
NBPF1-202ENST00000420513 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
NBPF1-202ENST00000420513 AGERQ15109 404 aa11.26□□□□□ -0.61
NBPF1-202ENST00000420513 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
NBPF1-202ENST00000420513 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
NBPF1-202ENST00000420513 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
NBPF1-202ENST00000420513 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
NBPF1-202ENST00000420513 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
NBPF1-202ENST00000420513 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
NBPF1-202ENST00000420513 GPBP1L1Q9HC44 474 aaPredicted RBP11.24□□□□□ -0.61
NBPF1-202ENST00000420513 FAM135BQ49AJ0 1406 aa11.24□□□□□ -0.61
NBPF1-202ENST00000420513 KIF3BO15066 747 aa11.23□□□□□ -0.61
NBPF1-202ENST00000420513 FAM174AQ8TBP5 190 aa11.23□□□□□ -0.61
NBPF1-202ENST00000420513 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
NBPF1-202ENST00000420513 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
NBPF1-202ENST00000420513 CCNB3Q8WWL7 1395 aa11.23□□□□□ -0.61
NBPF1-202ENST00000420513 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
NBPF1-202ENST00000420513 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
NBPF1-202ENST00000420513 WASHC2CQ9Y4E1 1318 aa11.22□□□□□ -0.61
NBPF1-202ENST00000420513 TIAM1Q13009 1591 aa11.21□□□□□ -0.61
NBPF1-202ENST00000420513 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
NBPF1-202ENST00000420513 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
NBPF1-202ENST00000420513 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.62
NBPF1-202ENST00000420513 BMP1P13497 986 aa11.2□□□□□ -0.62
NBPF1-202ENST00000420513 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
NBPF1-202ENST00000420513 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
NBPF1-202ENST00000420513 NNTQ13423 1086 aa11.19□□□□□ -0.62
NBPF1-202ENST00000420513 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
NBPF1-202ENST00000420513 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
NBPF1-202ENST00000420513 ARHGAP23Q9P227 1491 aa11.19□□□□□ -0.62
NBPF1-202ENST00000420513 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
NBPF1-202ENST00000420513 ARMC2Q8NEN0 867 aa11.18□□□□□ -0.62
NBPF1-202ENST00000420513 FAM117AQ9C073 453 aa11.18□□□□□ -0.62
NBPF1-202ENST00000420513 ABCC3O15438 1527 aa11.18□□□□□ -0.62
NBPF1-202ENST00000420513 ERVK-7P63135 1459 aa11.18□□□□□ -0.62
NBPF1-202ENST00000420513 NCOA2Q15596 1464 aa11.18□□□□□ -0.62
NBPF1-202ENST00000420513 MPNDQ8N594 471 aa11.17□□□□□ -0.62
NBPF1-202ENST00000420513 SLIT1O75093 1534 aa11.17□□□□□ -0.62
NBPF1-202ENST00000420513 CCDC141Q6ZP82 1450 aa11.17□□□□□ -0.62
NBPF1-202ENST00000420513 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
NBPF1-202ENST00000420513 LTKP29376 864 aa11.16□□□□□ -0.62
NBPF1-202ENST00000420513 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
NBPF1-202ENST00000420513 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
NBPF1-202ENST00000420513 WFS1O76024 890 aa11.15□□□□□ -0.62
NBPF1-202ENST00000420513 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
NBPF1-202ENST00000420513 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
NBPF1-202ENST00000420513 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
NBPF1-202ENST00000420513 TMEM94Q12767 1356 aa11.15□□□□□ -0.63
NBPF1-202ENST00000420513 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
NBPF1-202ENST00000420513 ADH1CP00326 375 aa11.14□□□□□ -0.63
NBPF1-202ENST00000420513 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
NBPF1-202ENST00000420513 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
NBPF1-202ENST00000420513 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
NBPF1-202ENST00000420513 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
NBPF1-202ENST00000420513 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
NBPF1-202ENST00000420513 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
NBPF1-202ENST00000420513 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
NBPF1-202ENST00000420513 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
NBPF1-202ENST00000420513 CDK15Q96Q40 435 aa11.12□□□□□ -0.63
NBPF1-202ENST00000420513 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
NBPF1-202ENST00000420513 PHLPP1O60346 1717 aa11.12□□□□□ -0.63
NBPF1-202ENST00000420513 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
NBPF1-202ENST00000420513 CEP162Q5TB80 1403 aa11.11□□□□□ -0.63
NBPF1-202ENST00000420513 LRP6O75581 1613 aa11.11□□□□□ -0.63
NBPF1-202ENST00000420513 JCADQ9P266 1359 aa11.11□□□□□ -0.63
NBPF1-202ENST00000420513 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
NBPF1-202ENST00000420513 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
NBPF1-202ENST00000420513 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
NBPF1-202ENST00000420513 CEP152O94986 1710 aa11.1□□□□□ -0.63
NBPF1-202ENST00000420513 TIMP2P16035 220 aa11.1□□□□□ -0.63
NBPF1-202ENST00000420513 LRRN4Q8WUT4 740 aa11.1□□□□□ -0.63
NBPF1-202ENST00000420513 CARD14Q9BXL6 1004 aa11.1□□□□□ -0.63
NBPF1-202ENST00000420513 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
NBPF1-202ENST00000420513 CFAP65Q6ZU64 1925 aaKnown RBP11.09□□□□□ -0.63
NBPF1-202ENST00000420513 TET3O43151 1660 aa11.09□□□□□ -0.63
NBPF1-202ENST00000420513 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
NBPF1-202ENST00000420513 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
NBPF1-202ENST00000420513 ZFP42Q96MM3 310 aa11.09□□□□□ -0.63
NBPF1-202ENST00000420513 NWD1Q149M9 1564 aa11.08□□□□□ -0.64
NBPF1-202ENST00000420513 TMEM2Q9UHN6 1383 aa11.08□□□□□ -0.64
NBPF1-202ENST00000420513 TERTO14746 1132 aaKnown RBP11.08□□□□□ -0.64
NBPF1-202ENST00000420513 AP1G2O75843 785 aa11.08□□□□□ -0.64
NBPF1-202ENST00000420513 ZIC2O95409 532 aaPredicted RBP11.08□□□□□ -0.64
NBPF1-202ENST00000420513 KCNA6P17658 529 aa11.08□□□□□ -0.64
NBPF1-202ENST00000420513 NR5A1Q13285 461 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms