RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 GPR162Q16538 588 aa28.67■■■□□ 2.18
CPNE1-211ENST00000420363 PIGBQ92521 554 aa28.67■■■□□ 2.18
CPNE1-211ENST00000420363 NUDCQ9Y266 331 aa28.67■■■□□ 2.18
CPNE1-211ENST00000420363 UTRNP46939 3433 aa28.66■■■□□ 2.18
CPNE1-211ENST00000420363 VIRMAQ69YN4 1812 aaKnown RBP28.66■■■□□ 2.18
CPNE1-211ENST00000420363 TAF1LQ8IZX4 1826 aa28.66■■■□□ 2.18
CPNE1-211ENST00000420363 AKAP4Q5JQC9 854 aa28.65■■■□□ 2.18
CPNE1-211ENST00000420363 MRC1P22897 1456 aa28.65■■■□□ 2.18
CPNE1-211ENST00000420363 ZNF784Q8NCA9 323 aaPredicted RBP28.64■■■□□ 2.18
CPNE1-211ENST00000420363 ZNF831Q5JPB2 1677 aa28.63■■■□□ 2.17
CPNE1-211ENST00000420363 TUBGCP6Q96RT7 1819 aa28.62■■■□□ 2.17
CPNE1-211ENST00000420363 COL23A1Q86Y22 540 aaPredicted RBP28.61■■■□□ 2.17
CPNE1-211ENST00000420363 PELP1Q8IZL8 1130 aaKnown RBP28.6■■■□□ 2.17
CPNE1-211ENST00000420363 RSPH6AQ9H0K4 717 aa28.6■■■□□ 2.17
CPNE1-211ENST00000420363 MTHFSDQ2M296 383 aaKnown RBP28.59■■■□□ 2.17
CPNE1-211ENST00000420363 CABP4P57796 275 aa28.57■■■□□ 2.16
CPNE1-211ENST00000420363 GAS2L2Q8NHY3 880 aa28.57■■■□□ 2.16
CPNE1-211ENST00000420363 C4BP0C0L5 1744 aa28.57■■■□□ 2.16
CPNE1-211ENST00000420363 U2AF1L5P0DN76 240 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-211ENST00000420363 U2AF1Q01081 240 aaKnown RBP eCLIP28.56■■■□□ 2.162e-6■□□□□ 8.5
CPNE1-211ENST00000420363 CICQ96RK0 1608 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-211ENST00000420363 MYBBP1AQ9BQG0 1328 aaKnown RBP28.56■■■□□ 2.16
CPNE1-211ENST00000420363 FCHSD2O94868 740 aa28.55■■■□□ 2.16
CPNE1-211ENST00000420363 PRKAR2BP31323 418 aa28.55■■■□□ 2.16
CPNE1-211ENST00000420363 FLAD1Q8NFF5 587 aa28.55■■■□□ 2.16
CPNE1-211ENST00000420363 ASAP1Q9ULH1 1129 aa28.55■■■□□ 2.16
CPNE1-211ENST00000420363 NLGN2Q8NFZ4 835 aa28.54■■■□□ 2.16
CPNE1-211ENST00000420363 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
CPNE1-211ENST00000420363 LOC102724428A0A0B4J2F2 783 aa28.53■■■□□ 2.16
CPNE1-211ENST00000420363 SIK1P57059 783 aa28.53■■■□□ 2.16
CPNE1-211ENST00000420363 MSL1Q68DK7 614 aa28.53■■■□□ 2.16
CPNE1-211ENST00000420363 CHD4Q14839 1912 aa28.52■■■□□ 2.16
CPNE1-211ENST00000420363 RNMTO43148 476 aaKnown RBP28.51■■■□□ 2.15
CPNE1-211ENST00000420363 SLC52A2Q9HAB3 445 aa28.51■■■□□ 2.15
CPNE1-211ENST00000420363 COL24A1Q17RW2 1714 aa28.51■■■□□ 2.15
CPNE1-211ENST00000420363 COL5A3P25940 1745 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-211ENST00000420363 SIPA1L3O60292 1781 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-211ENST00000420363 ZNF316A6NFI3 1004 aaPredicted RBP28.49■■■□□ 2.15
CPNE1-211ENST00000420363 AK7Q96M32 723 aa28.49■■■□□ 2.15
CPNE1-211ENST00000420363 UBR3Q6ZT12 1888 aa28.49■■■□□ 2.15
CPNE1-211ENST00000420363 GNAT3A8MTJ3 354 aa28.48■■■□□ 2.15
CPNE1-211ENST00000420363 NFATC2IPQ8NCF5 419 aa28.48■■■□□ 2.15
CPNE1-211ENST00000420363 PHACTR3Q96KR7 559 aa28.48■■■□□ 2.15
CPNE1-211ENST00000420363 PRKRIP1Q9H875 184 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-211ENST00000420363 LGR6Q9HBX8 967 aa28.47■■■□□ 2.15
CPNE1-211ENST00000420363 UBR2Q8IWV8 1755 aa28.46■■■□□ 2.15
CPNE1-211ENST00000420363 CEMIPQ8WUJ3 1361 aa28.46■■■□□ 2.15
CPNE1-211ENST00000420363 GRIN3BO60391 1043 aa28.45■■■□□ 2.14
CPNE1-211ENST00000420363 TJP1Q07157 1748 aa28.44■■■□□ 2.14
CPNE1-211ENST00000420363 ATP6V1AP38606 617 aa28.44■■■□□ 2.14
CPNE1-211ENST00000420363 ITPK1Q13572 414 aa28.43■■■□□ 2.14
CPNE1-211ENST00000420363 LINC00116Q8NCU8 138 aa28.43■■■□□ 2.14
CPNE1-211ENST00000420363 GOLGB1Q14789 3259 aaKnown RBP28.42■■■□□ 2.14
CPNE1-211ENST00000420363 PHF14O94880 888 aa28.42■■■□□ 2.14
CPNE1-211ENST00000420363 PNNQ9H307 717 aaKnown RBP28.42■■■□□ 2.14
CPNE1-211ENST00000420363 CD2APQ9Y5K6 639 aa28.42■■■□□ 2.14
CPNE1-211ENST00000420363 KCPQ6ZWJ8 1503 aa28.42■■■□□ 2.14
CPNE1-211ENST00000420363 YBX3P16989 372 aaKnown RBP eCLIP28.41■■■□□ 2.142e-6■■■■□ 21.8
CPNE1-211ENST00000420363 SLC4A9Q96Q91 983 aa28.41■■■□□ 2.14
CPNE1-211ENST00000420363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.4■■■□□ 2.14
CPNE1-211ENST00000420363 NEFMP07197 916 aa28.4■■■□□ 2.14
CPNE1-211ENST00000420363 DLG5Q8TDM6 1919 aa28.39■■■□□ 2.14
CPNE1-211ENST00000420363 IL17REQ8NFR9 667 aa28.39■■■□□ 2.14
CPNE1-211ENST00000420363 PLEKHF1Q96S99 279 aa28.39■■■□□ 2.14
CPNE1-211ENST00000420363 RBM42Q9BTD8 480 aaKnown RBP28.39■■■□□ 2.14
CPNE1-211ENST00000420363 HTATSF1O43719 755 aaKnown RBP28.38■■■□□ 2.13
CPNE1-211ENST00000420363 SMIM5Q71RC9 77 aa28.38■■■□□ 2.13
CPNE1-211ENST00000420363 AMIGO3Q86WK7 504 aa28.38■■■□□ 2.13
CPNE1-211ENST00000420363 CNTNAP4Q9C0A0 1308 aa28.38■■■□□ 2.13
CPNE1-211ENST00000420363 SSFA2P28290 1259 aa28.37■■■□□ 2.13
CPNE1-211ENST00000420363 C1QTNF8P60827 252 aa28.37■■■□□ 2.13
CPNE1-211ENST00000420363 TEFQ10587 303 aa28.37■■■□□ 2.13
CPNE1-211ENST00000420363 PTCD1O75127 700 aaKnown RBP28.35■■■□□ 2.13
CPNE1-211ENST00000420363 RC3H1Q5TC82 1133 aaKnown RBP28.35■■■□□ 2.13
CPNE1-211ENST00000420363 RTF1Q92541 710 aaKnown RBP28.34■■■□□ 2.13
CPNE1-211ENST00000420363 MAPK8IP3Q9UPT6 1336 aa28.34■■■□□ 2.13
CPNE1-211ENST00000420363 MYH14Q7Z406 1995 aaKnown RBP28.33■■■□□ 2.13
CPNE1-211ENST00000420363 GNPATO15228 680 aa28.33■■■□□ 2.13
CPNE1-211ENST00000420363 GIGYF1O75420 1035 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-211ENST00000420363 VSIG10Q8N0Z9 540 aa28.32■■■□□ 2.12
CPNE1-211ENST00000420363 SENP3-EIF4A1A0A087X0R7 540 aa28.31■■■□□ 2.12
CPNE1-211ENST00000420363 SLC39A6Q13433 755 aa28.31■■■□□ 2.12
CPNE1-211ENST00000420363 TTC5Q8N0Z6 440 aa28.31■■■□□ 2.12
CPNE1-211ENST00000420363 NFE2L2Q16236 605 aa28.3■■■□□ 2.12
CPNE1-211ENST00000420363 ADRA2BP18089 450 aa28.29■■■□□ 2.12
CPNE1-211ENST00000420363 C4AP0C0L4 1744 aa28.29■■■□□ 2.12
CPNE1-211ENST00000420363 WDR43Q15061 677 aaKnown RBP eCLIP28.28■■■□□ 2.12
CPNE1-211ENST00000420363 ZNF790Q6PG37 636 aa28.28■■■□□ 2.12
CPNE1-211ENST00000420363 RTCBQ9Y3I0 505 aaKnown RBP28.27■■■□□ 2.12
CPNE1-211ENST00000420363 CRKLP46109 303 aaKnown RBP28.26■■■□□ 2.11
CPNE1-211ENST00000420363 MCM10Q7L590 875 aa28.26■■■□□ 2.11
CPNE1-211ENST00000420363 TRAPPC3LQ5T215 181 aa28.25■■■□□ 2.11
CPNE1-211ENST00000420363 HEG1Q9ULI3 1381 aa28.24■■■□□ 2.11
CPNE1-211ENST00000420363 BTBD11A6QL63 1104 aa28.24■■■□□ 2.11
CPNE1-211ENST00000420363 RPS6KA4O75676 772 aa28.24■■■□□ 2.11
CPNE1-211ENST00000420363 DNAJC10Q8IXB1 793 aa28.24■■■□□ 2.11
CPNE1-211ENST00000420363 KDM3BQ7LBC6 1761 aa28.24■■■□□ 2.11
CPNE1-211ENST00000420363 WWC3Q9ULE0 1092 aa28.23■■■□□ 2.11
CPNE1-211ENST00000420363 ZNF496Q96IT1 587 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-211ENST00000420363 FMNL2Q96PY5 1086 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms