RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 NFATC2IPQ8NCF5 419 aa26.75■■□□□ 1.87
EGFR-204ENST00000420316 RTF1Q92541 710 aaKnown RBP26.75■■□□□ 1.87
EGFR-204ENST00000420316 HTATSF1O43719 755 aaKnown RBP26.74■■□□□ 1.87
EGFR-204ENST00000420316 SALL2Q9Y467 1007 aaPredicted RBP26.74■■□□□ 1.87
EGFR-204ENST00000420316 PROM2Q8N271 834 aa26.71■■□□□ 1.87
EGFR-204ENST00000420316 SMARCC1Q92922 1105 aaPredicted RBP26.71■■□□□ 1.87
EGFR-204ENST00000420316 SLC52A2Q9HAB3 445 aa26.71■■□□□ 1.87
EGFR-204ENST00000420316 TXNRD1Q16881 649 aa26.71■■□□□ 1.87
EGFR-204ENST00000420316 ASAP1Q9ULH1 1129 aa26.7■■□□□ 1.86
EGFR-204ENST00000420316 TRIM35Q9UPQ4 493 aa26.7■■□□□ 1.86
EGFR-204ENST00000420316 RGPD3A6NKT7 1758 aaPredicted RBP26.7■■□□□ 1.86
EGFR-204ENST00000420316 RGPD4Q7Z3J3 1758 aa26.7■■□□□ 1.86
EGFR-204ENST00000420316 CEMIPQ8WUJ3 1361 aa26.69■■□□□ 1.86
EGFR-204ENST00000420316 TEFQ10587 303 aa26.68■■□□□ 1.86
EGFR-204ENST00000420316 SIPA1L3O60292 1781 aaPredicted RBP26.68■■□□□ 1.86
EGFR-204ENST00000420316 MRC1P22897 1456 aa26.67■■□□□ 1.86
EGFR-204ENST00000420316 SLC39A6Q13433 755 aa26.67■■□□□ 1.86
EGFR-204ENST00000420316 ATG3Q9NT62 314 aa26.67■■□□□ 1.86
EGFR-204ENST00000420316 KCNQ4P56696 695 aa26.67■■□□□ 1.86
EGFR-204ENST00000420316 SLC27A3Q5K4L6 730 aa26.67■■□□□ 1.86
EGFR-204ENST00000420316 PALLDQ8WX93 1383 aa26.66■■□□□ 1.86
EGFR-204ENST00000420316 MIS18AQ9NYP9 233 aa26.65■■□□□ 1.86
EGFR-204ENST00000420316 KCNQ3O43525 872 aa26.62■■□□□ 1.85
EGFR-204ENST00000420316 LMOD3Q0VAK6 560 aa26.62■■□□□ 1.85
EGFR-204ENST00000420316 LRRC4BQ9NT99 713 aa26.62■■□□□ 1.85
EGFR-204ENST00000420316 HMGB2P26583 209 aaKnown RBP26.61■■□□□ 1.85
EGFR-204ENST00000420316 CCNL1Q9UK58 526 aaPredicted RBP26.61■■□□□ 1.85
EGFR-204ENST00000420316 LY75O60449 1722 aa26.61■■□□□ 1.85
EGFR-204ENST00000420316 RREB1Q92766 1687 aa26.61■■□□□ 1.85
EGFR-204ENST00000420316 PTCD1O75127 700 aaKnown RBP26.6■■□□□ 1.85
EGFR-204ENST00000420316 RBM42Q9BTD8 480 aaKnown RBP26.6■■□□□ 1.85
EGFR-204ENST00000420316 PAPPAQ13219 1627 aa26.6■■□□□ 1.85
EGFR-204ENST00000420316 LOC102724428A0A0B4J2F2 783 aa26.59■■□□□ 1.85
EGFR-204ENST00000420316 BTBD11A6QL63 1104 aa26.59■■□□□ 1.85
EGFR-204ENST00000420316 SIK1P57059 783 aa26.59■■□□□ 1.85
EGFR-204ENST00000420316 NBPF14Q5TI25 921 aa26.59■■□□□ 1.85
EGFR-204ENST00000420316 LAS1LQ9Y4W2 734 aaKnown RBP26.59■■□□□ 1.85
EGFR-204ENST00000420316 TAF7Q15545 349 aaPredicted RBP26.58■■□□□ 1.85
EGFR-204ENST00000420316 WWC1Q8IX03 1113 aa26.55■■□□□ 1.84
EGFR-204ENST00000420316 SLC4A9Q96Q91 983 aa26.55■■□□□ 1.84
EGFR-204ENST00000420316 NUP188Q5SRE5 1749 aa26.55■■□□□ 1.84
EGFR-204ENST00000420316 ZNF790Q6PG37 636 aa26.54■■□□□ 1.84
EGFR-204ENST00000420316 KCPQ6ZWJ8 1503 aa26.53■■□□□ 1.84
EGFR-204ENST00000420316 ATP6V1AP38606 617 aa26.53■■□□□ 1.84
EGFR-204ENST00000420316 TTC5Q8N0Z6 440 aa26.53■■□□□ 1.84
EGFR-204ENST00000420316 KDM3BQ7LBC6 1761 aa26.53■■□□□ 1.84
EGFR-204ENST00000420316 UBR2Q8IWV8 1755 aa26.53■■□□□ 1.84
EGFR-204ENST00000420316 NCBP3Q53F19 620 aaKnown RBP26.52■■□□□ 1.84
EGFR-204ENST00000420316 ANO8Q9HCE9 1232 aaPredicted RBP26.52■■□□□ 1.84
EGFR-204ENST00000420316 ZNF496Q96IT1 587 aaPredicted RBP26.51■■□□□ 1.83
EGFR-204ENST00000420316 STK32BQ9NY57 414 aa26.51■■□□□ 1.83
EGFR-204ENST00000420316 TSPYL4Q9UJ04 414 aa26.51■■□□□ 1.83
EGFR-204ENST00000420316 ITPK1Q13572 414 aa26.5■■□□□ 1.83
EGFR-204ENST00000420316 SLC15A2Q16348 729 aa26.5■■□□□ 1.83
EGFR-204ENST00000420316 CCDC27Q2M243 656 aa26.5■■□□□ 1.83
EGFR-204ENST00000420316 TAF1LQ8IZX4 1826 aa26.49■■□□□ 1.83
EGFR-204ENST00000420316 VSIG10Q8N0Z9 540 aa26.49■■□□□ 1.83
EGFR-204ENST00000420316 AKT1S1Q96B36 256 aa26.49■■□□□ 1.83
EGFR-204ENST00000420316 TJP1Q07157 1748 aa26.48■■□□□ 1.83
EGFR-204ENST00000420316 BABAM1Q9NWV8 329 aa26.48■■□□□ 1.83
EGFR-204ENST00000420316 C5P01031 1676 aa26.48■■□□□ 1.83
EGFR-204ENST00000420316 PRAMEF22A3QJZ6 481 aa26.47■■□□□ 1.83
EGFR-204ENST00000420316 HNRNPUQ00839 825 aaKnown RBP eCLIP26.47■■□□□ 1.83
EGFR-204ENST00000420316 R3HDM1Q15032 1099 aaKnown RBP26.47■■□□□ 1.83
EGFR-204ENST00000420316 LINC00116Q8NCU8 138 aa26.47■■□□□ 1.83
EGFR-204ENST00000420316 ZNF831Q5JPB2 1677 aa26.47■■□□□ 1.83
EGFR-204ENST00000420316 CHL1O00533 1208 aa26.46■■□□□ 1.83
EGFR-204ENST00000420316 ZNF827Q17R98 1081 aa26.46■■□□□ 1.83
EGFR-204ENST00000420316 DNAJC10Q8IXB1 793 aa26.46■■□□□ 1.83
EGFR-204ENST00000420316 FMNL2Q96PY5 1086 aa26.46■■□□□ 1.83
EGFR-204ENST00000420316 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
EGFR-204ENST00000420316 MBIPQ9NS73 344 aa26.46■■□□□ 1.83
EGFR-204ENST00000420316 KRT24Q2M2I5 525 aa26.45■■□□□ 1.82
EGFR-204ENST00000420316 TSR2Q969E8 191 aaKnown RBP26.45■■□□□ 1.82
EGFR-204ENST00000420316 CFAP44Q96MT7 982 aa26.45■■□□□ 1.82
EGFR-204ENST00000420316 ZNF853P0CG23 659 aa26.44■■□□□ 1.82
EGFR-204ENST00000420316 CALD1Q05682 793 aaKnown RBP26.44■■□□□ 1.82
EGFR-204ENST00000420316 NGEFQ8N5V2 710 aa26.44■■□□□ 1.82
EGFR-204ENST00000420316 HEG1Q9ULI3 1381 aa26.44■■□□□ 1.82
EGFR-204ENST00000420316 PSDA5PKW4 1024 aaPredicted RBP26.43■■□□□ 1.82
EGFR-204ENST00000420316 EIF4A1P60842 406 aaKnown RBP26.43■■□□□ 1.82
EGFR-204ENST00000420316 SMIM5Q71RC9 77 aa26.43■■□□□ 1.82
EGFR-204ENST00000420316 IFT57Q9NWB7 429 aa26.43■■□□□ 1.82
EGFR-204ENST00000420316 GNAI1P63096 354 aa26.42■■□□□ 1.82
EGFR-204ENST00000420316 RC3H1Q5TC82 1133 aaKnown RBP26.42■■□□□ 1.82
EGFR-204ENST00000420316 ZNF521Q96K83 1311 aa26.42■■□□□ 1.82
EGFR-204ENST00000420316 TFCP2L1Q9NZI6 479 aa26.42■■□□□ 1.82
EGFR-204ENST00000420316 COL5A3P25940 1745 aaPredicted RBP26.42■■□□□ 1.82
EGFR-204ENST00000420316 TEX13AQ9BXU3 409 aaPredicted RBP26.41■■□□□ 1.82
EGFR-204ENST00000420316 C4BP0C0L5 1744 aa26.41■■□□□ 1.82
EGFR-204ENST00000420316 WDR63Q8IWG1 891 aa26.41■■□□□ 1.82
EGFR-204ENST00000420316 AK7Q96M32 723 aa26.41■■□□□ 1.82
EGFR-204ENST00000420316 CNTNAP4Q9C0A0 1308 aa26.39■■□□□ 1.82
EGFR-204ENST00000420316 USP16Q9Y5T5 823 aa26.39■■□□□ 1.82
EGFR-204ENST00000420316 CICQ96RK0 1608 aaPredicted RBP26.38■■□□□ 1.81
EGFR-204ENST00000420316 TUBGCP6Q96RT7 1819 aa26.38■■□□□ 1.81
EGFR-204ENST00000420316 MYH14Q7Z406 1995 aaKnown RBP26.38■■□□□ 1.81
EGFR-204ENST00000420316 SNRPA1P09661 255 aaKnown RBP26.37■■□□□ 1.81
EGFR-204ENST00000420316 CYP19A1P11511 503 aaPredicted RBP26.37■■□□□ 1.81
EGFR-204ENST00000420316 AMIGO3Q86WK7 504 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms