RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ADAMTS7Q9UKP4 1686 aa15.05■□□□□ -0
SSBP3-206ENST00000420121 LOC102724428A0A0B4J2F2 783 aa15.04■□□□□ -0
SSBP3-206ENST00000420121 SIK1P57059 783 aa15.04■□□□□ -0
SSBP3-206ENST00000420121 ITPK1Q13572 414 aa15.04■□□□□ -0
SSBP3-206ENST00000420121 PLEKHO1Q53GL0 409 aaPredicted RBP15.04■□□□□ -0
SSBP3-206ENST00000420121 CC2D1BQ5T0F9 858 aaKnown RBP15.04■□□□□ -0
SSBP3-206ENST00000420121 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
SSBP3-206ENST00000420121 ZNF530Q6P9A1 599 aaPredicted RBP15.04■□□□□ -0
SSBP3-206ENST00000420121 LINC00116Q8NCU8 138 aa15.04■□□□□ -0
SSBP3-206ENST00000420121 MYH14Q7Z406 1995 aaKnown RBP15.04■□□□□ -0
SSBP3-206ENST00000420121 CHD4Q14839 1912 aa15.04■□□□□ -0
SSBP3-206ENST00000420121 CICQ96RK0 1608 aaPredicted RBP15.03■□□□□ -0
SSBP3-206ENST00000420121 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
SSBP3-206ENST00000420121 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
SSBP3-206ENST00000420121 DCAF5Q96JK2 942 aa15.03■□□□□ -0
SSBP3-206ENST00000420121 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
SSBP3-206ENST00000420121 SMIM5Q71RC9 77 aa15.02■□□□□ -0
SSBP3-206ENST00000420121 TJP1Q07157 1748 aa15.02□□□□□ -0.01
SSBP3-206ENST00000420121 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
SSBP3-206ENST00000420121 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
SSBP3-206ENST00000420121 POLD1P28340 1107 aa15□□□□□ -0.01
SSBP3-206ENST00000420121 MSL1Q68DK7 614 aa15□□□□□ -0.01
SSBP3-206ENST00000420121 MRC1P22897 1456 aa15□□□□□ -0.01
SSBP3-206ENST00000420121 C4AP0C0L4 1744 aa15□□□□□ -0.01
SSBP3-206ENST00000420121 GOLGB1Q14789 3259 aaKnown RBP15□□□□□ -0.01
SSBP3-206ENST00000420121 ATP6V1AP38606 617 aa14.99□□□□□ -0.01
SSBP3-206ENST00000420121 FLAD1Q8NFF5 587 aa14.99□□□□□ -0.01
SSBP3-206ENST00000420121 AK7Q96M32 723 aa14.99□□□□□ -0.01
SSBP3-206ENST00000420121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.98□□□□□ -0.01
SSBP3-206ENST00000420121 HMOX1P09601 288 aa14.98□□□□□ -0.01
SSBP3-206ENST00000420121 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
SSBP3-206ENST00000420121 NLGN2Q8NFZ4 835 aa14.98□□□□□ -0.01
SSBP3-206ENST00000420121 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
SSBP3-206ENST00000420121 YY1P25490 414 aa14.97□□□□□ -0.01
SSBP3-206ENST00000420121 SSFA2P28290 1259 aa14.97□□□□□ -0.01
SSBP3-206ENST00000420121 C1orf141Q5JVX7 400 aa14.97□□□□□ -0.01
SSBP3-206ENST00000420121 SIPA1L3O60292 1781 aaPredicted RBP14.97□□□□□ -0.01
SSBP3-206ENST00000420121 UBR2Q8IWV8 1755 aa14.96□□□□□ -0.01
SSBP3-206ENST00000420121 PHF14O94880 888 aa14.96□□□□□ -0.01
SSBP3-206ENST00000420121 CABP4P57796 275 aa14.96□□□□□ -0.01
SSBP3-206ENST00000420121 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.01
SSBP3-206ENST00000420121 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
SSBP3-206ENST00000420121 KIF13BQ9NQT8 1826 aa14.95□□□□□ -0.02
SSBP3-206ENST00000420121 GNPATO15228 680 aa14.95□□□□□ -0.02
SSBP3-206ENST00000420121 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
SSBP3-206ENST00000420121 KIAA1551Q9HCM1 1747 aa14.95□□□□□ -0.02
SSBP3-206ENST00000420121 KCPQ6ZWJ8 1503 aa14.94□□□□□ -0.02
SSBP3-206ENST00000420121 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
SSBP3-206ENST00000420121 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
SSBP3-206ENST00000420121 KLHL34Q8N239 644 aa14.94□□□□□ -0.02
SSBP3-206ENST00000420121 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
SSBP3-206ENST00000420121 CNTNAP4Q9C0A0 1308 aa14.93□□□□□ -0.02
SSBP3-206ENST00000420121 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
SSBP3-206ENST00000420121 RNMTO43148 476 aaKnown RBP14.92□□□□□ -0.02
SSBP3-206ENST00000420121 SLC52A2Q9HAB3 445 aa14.92□□□□□ -0.02
SSBP3-206ENST00000420121 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
SSBP3-206ENST00000420121 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
SSBP3-206ENST00000420121 YBX3P16989 372 aaKnown RBP eCLIP14.9□□□□□ -0.02
SSBP3-206ENST00000420121 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
SSBP3-206ENST00000420121 CD2APQ9Y5K6 639 aa14.9□□□□□ -0.02
SSBP3-206ENST00000420121 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
SSBP3-206ENST00000420121 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
SSBP3-206ENST00000420121 ARHGEF1Q92888 912 aaKnown RBP14.89□□□□□ -0.03
SSBP3-206ENST00000420121 N4BP2Q86UW6 1770 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-206ENST00000420121 CRKLP46109 303 aaKnown RBP14.88□□□□□ -0.03
SSBP3-206ENST00000420121 SLC39A6Q13433 755 aa14.88□□□□□ -0.03
SSBP3-206ENST00000420121 GPR162Q16538 588 aa14.88□□□□□ -0.03
SSBP3-206ENST00000420121 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
SSBP3-206ENST00000420121 BRCA1P38398 1863 aaKnown RBP14.88□□□□□ -0.03
SSBP3-206ENST00000420121 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
SSBP3-206ENST00000420121 TRAPPC3LQ5T215 181 aa14.87□□□□□ -0.03
SSBP3-206ENST00000420121 INTS5Q6P9B9 1019 aaKnown RBP14.87□□□□□ -0.03
SSBP3-206ENST00000420121 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
SSBP3-206ENST00000420121 MMP10P09238 476 aa14.86□□□□□ -0.03
SSBP3-206ENST00000420121 GYS1P13807 737 aa14.86□□□□□ -0.03
SSBP3-206ENST00000420121 DNAJC10Q8IXB1 793 aa14.86□□□□□ -0.03
SSBP3-206ENST00000420121 IL17REQ8NFR9 667 aa14.86□□□□□ -0.03
SSBP3-206ENST00000420121 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
SSBP3-206ENST00000420121 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
SSBP3-206ENST00000420121 ZNF784Q8NCA9 323 aaPredicted RBP14.85□□□□□ -0.03
SSBP3-206ENST00000420121 CEMIPQ8WUJ3 1361 aa14.85□□□□□ -0.03
SSBP3-206ENST00000420121 C10orf71Q711Q0 1435 aa14.84□□□□□ -0.03
SSBP3-206ENST00000420121 PXDNLA1KZ92 1463 aa14.84□□□□□ -0.03
SSBP3-206ENST00000420121 CYP19A1P11511 503 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-206ENST00000420121 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
SSBP3-206ENST00000420121 GAS2L2Q8NHY3 880 aa14.84□□□□□ -0.03
SSBP3-206ENST00000420121 CFAP53Q96M91 514 aa14.84□□□□□ -0.03
SSBP3-206ENST00000420121 AFDNP55196 1824 aaKnown RBP14.83□□□□□ -0.04
SSBP3-206ENST00000420121 GNAT3A8MTJ3 354 aa14.83□□□□□ -0.04
SSBP3-206ENST00000420121 RFC4P35249 363 aa14.83□□□□□ -0.04
SSBP3-206ENST00000420121 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.04
SSBP3-206ENST00000420121 SRP68Q9UHB9 627 aaKnown RBP14.83□□□□□ -0.04
SSBP3-206ENST00000420121 SOS1Q07889 1333 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-206ENST00000420121 USP42Q9H9J4 1324 aaKnown RBP14.83□□□□□ -0.04
SSBP3-206ENST00000420121 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
SSBP3-206ENST00000420121 NRXN2Q9P2S2 1712 aa14.82□□□□□ -0.04
SSBP3-206ENST00000420121 VSIG10Q8N0Z9 540 aa14.81□□□□□ -0.04
SSBP3-206ENST00000420121 GRIN3BO60391 1043 aa14.8□□□□□ -0.04
SSBP3-206ENST00000420121 DDR1Q08345 913 aa14.8□□□□□ -0.04
SSBP3-206ENST00000420121 FKBP8Q14318 412 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms