RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 EVA1CP58658 441 aa18.44■□□□□ 0.54
SEMA4D-204ENST00000420101 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
SEMA4D-204ENST00000420101 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
SEMA4D-204ENST00000420101 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
SEMA4D-204ENST00000420101 TBC1D32Q96NH3 1257 aa18.44■□□□□ 0.54
SEMA4D-204ENST00000420101 NHSL1Q5SYE7 1610 aa18.43■□□□□ 0.54
SEMA4D-204ENST00000420101 TEFQ10587 303 aa18.43■□□□□ 0.54
SEMA4D-204ENST00000420101 ATF7IPQ6VMQ6 1270 aa18.43■□□□□ 0.54
SEMA4D-204ENST00000420101 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
SEMA4D-204ENST00000420101 DDX11L8A8MPP1 907 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 TOM1O60784 492 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 RLBP1P12271 317 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 STRN4Q9NRL3 753 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 ROBO1Q9Y6N7 1651 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 TRIM27P14373 513 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 CHMP5Q9NZZ3 219 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 SPG7Q9UQ90 795 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
SEMA4D-204ENST00000420101 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
SEMA4D-204ENST00000420101 ABCC6O95255 1503 aa18.41■□□□□ 0.54
SEMA4D-204ENST00000420101 MRPL50Q8N5N7 158 aaKnown RBP18.41■□□□□ 0.54
SEMA4D-204ENST00000420101 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
SEMA4D-204ENST00000420101 COL18A1P39060 1754 aa18.39■□□□□ 0.53
SEMA4D-204ENST00000420101 MVPQ14764 893 aaKnown RBP18.39■□□□□ 0.53
SEMA4D-204ENST00000420101 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.53
SEMA4D-204ENST00000420101 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
SEMA4D-204ENST00000420101 PDCL3Q9H2J4 239 aa18.38■□□□□ 0.53
SEMA4D-204ENST00000420101 TERF1P54274 439 aa18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 SLKQ9H2G2 1235 aaPredicted RBP18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 CAMTA1Q9Y6Y1 1673 aa18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 ESPNB1AK53 854 aa18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
SEMA4D-204ENST00000420101 UBAP1LF5GYI3 381 aa18.36■□□□□ 0.53
SEMA4D-204ENST00000420101 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
SEMA4D-204ENST00000420101 TRAK2O60296 914 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 IGHDP01880 384 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
SEMA4D-204ENST00000420101 LRRC37A3O60309 1634 aa18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 MEGF6O75095 1541 aa18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 COL5A2P05997 1499 aaPredicted RBP18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 LARP1Q6PKG0 1096 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 GRPEL1Q9HAV7 217 aa18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-204ENST00000420101 SLC4A2P04920 1241 aa18.33■□□□□ 0.53
SEMA4D-204ENST00000420101 ABCA3Q99758 1704 aa18.33■□□□□ 0.52
SEMA4D-204ENST00000420101 PHKG2P15735 406 aa18.33■□□□□ 0.52
SEMA4D-204ENST00000420101 CCDC30Q5VVM6 783 aa18.33■□□□□ 0.52
SEMA4D-204ENST00000420101 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
SEMA4D-204ENST00000420101 MAP7D2Q96T17 732 aa18.32■□□□□ 0.52
SEMA4D-204ENST00000420101 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
SEMA4D-204ENST00000420101 CIZ1Q9ULV3 898 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-204ENST00000420101 SEC24BO95487 1268 aa18.31■□□□□ 0.52
SEMA4D-204ENST00000420101 NUTM2BA6NNL0 878 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 NUTM2EB1AL46 878 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 IL2RBP14784 551 aa18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 NUTM2AQ8IVF1 878 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 ADAMTS2O95450 1211 aa18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-204ENST00000420101 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
SEMA4D-204ENST00000420101 EIF2S2P20042 333 aaKnown RBP18.29■□□□□ 0.52
SEMA4D-204ENST00000420101 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
SEMA4D-204ENST00000420101 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
SEMA4D-204ENST00000420101 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
SEMA4D-204ENST00000420101 KCNQ3O43525 872 aa18.28■□□□□ 0.52
SEMA4D-204ENST00000420101 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
SEMA4D-204ENST00000420101 OVOS2A0A0G2JMS6 1433 aa18.28■□□□□ 0.52
SEMA4D-204ENST00000420101 CYP27B1O15528 508 aa18.28■□□□□ 0.52
SEMA4D-204ENST00000420101 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
SEMA4D-204ENST00000420101 PTPRCP08575 1304 aa18.27■□□□□ 0.52
SEMA4D-204ENST00000420101 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
SEMA4D-204ENST00000420101 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
SEMA4D-204ENST00000420101 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
SEMA4D-204ENST00000420101 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
SEMA4D-204ENST00000420101 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
SEMA4D-204ENST00000420101 PCDHB15Q9Y5E8 787 aa18.26■□□□□ 0.51
SEMA4D-204ENST00000420101 PLEKHG2Q9H7P9 1386 aa18.26■□□□□ 0.51
SEMA4D-204ENST00000420101 ABCC4O15439 1325 aa18.26■□□□□ 0.51
SEMA4D-204ENST00000420101 CABP4P57796 275 aa18.26■□□□□ 0.51
SEMA4D-204ENST00000420101 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
SEMA4D-204ENST00000420101 IBTKQ9P2D0 1353 aaPredicted RBP18.25■□□□□ 0.51
SEMA4D-204ENST00000420101 GBP4Q96PP9 640 aa18.25■□□□□ 0.51
SEMA4D-204ENST00000420101 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms