RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 CALD1Q05682 793 aaKnown RBP24.22■■□□□ 1.47
SEMA3B-202ENST00000418576 THUMPD2Q9BTF0 503 aaKnown RBP24.22■■□□□ 1.47
SEMA3B-202ENST00000418576 SALL2Q9Y467 1007 aaPredicted RBP24.22■■□□□ 1.47
SEMA3B-202ENST00000418576 ITGB4P16144 1822 aa24.21■■□□□ 1.47
SEMA3B-202ENST00000418576 BAG6P46379 1132 aa24.21■■□□□ 1.47
SEMA3B-202ENST00000418576 TAF7Q15545 349 aaPredicted RBP24.21■■□□□ 1.47
SEMA3B-202ENST00000418576 SMARCC1Q92922 1105 aaPredicted RBP24.21■■□□□ 1.47
SEMA3B-202ENST00000418576 BTBD11A6QL63 1104 aa24.19■■□□□ 1.46
SEMA3B-202ENST00000418576 WWC1Q8IX03 1113 aa24.19■■□□□ 1.46
SEMA3B-202ENST00000418576 VIRMAQ69YN4 1812 aaKnown RBP24.19■■□□□ 1.46
SEMA3B-202ENST00000418576 PLSCR1O15162 318 aa24.19■■□□□ 1.46
SEMA3B-202ENST00000418576 BTAF1O14981 1849 aa24.18■■□□□ 1.46
SEMA3B-202ENST00000418576 ASAP1Q9ULH1 1129 aa24.18■■□□□ 1.46
SEMA3B-202ENST00000418576 ATG3Q9NT62 314 aa24.17■■□□□ 1.46
SEMA3B-202ENST00000418576 TNS1Q9HBL0 1735 aaKnown RBP24.17■■□□□ 1.46
SEMA3B-202ENST00000418576 TTC5Q8N0Z6 440 aa24.16■■□□□ 1.46
SEMA3B-202ENST00000418576 PALLDQ8WX93 1383 aa24.15■■□□□ 1.46
SEMA3B-202ENST00000418576 BABAM1Q9NWV8 329 aa24.15■■□□□ 1.46
SEMA3B-202ENST00000418576 SLC39A6Q13433 755 aa24.14■■□□□ 1.46
SEMA3B-202ENST00000418576 ZNF790Q6PG37 636 aa24.14■■□□□ 1.46
SEMA3B-202ENST00000418576 HNRNPUQ00839 825 aaKnown RBP eCLIP24.14■■□□□ 1.45
SEMA3B-202ENST00000418576 EN1Q05925 392 aaPredicted RBP24.14■■□□□ 1.45
SEMA3B-202ENST00000418576 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
SEMA3B-202ENST00000418576 DEFB132Q7Z7B7 95 aa24.13■■□□□ 1.45
SEMA3B-202ENST00000418576 WDR63Q8IWG1 891 aa24.13■■□□□ 1.45
SEMA3B-202ENST00000418576 SOCS7O14512 581 aa24.12■■□□□ 1.45
SEMA3B-202ENST00000418576 CFAP44Q96MT7 982 aa24.12■■□□□ 1.45
SEMA3B-202ENST00000418576 MIS18AQ9NYP9 233 aa24.12■■□□□ 1.45
SEMA3B-202ENST00000418576 TSPYL4Q9UJ04 414 aa24.12■■□□□ 1.45
SEMA3B-202ENST00000418576 SIPA1L3O60292 1781 aaPredicted RBP24.12■■□□□ 1.45
SEMA3B-202ENST00000418576 GNAI1P63096 354 aa24.11■■□□□ 1.45
SEMA3B-202ENST00000418576 IFT57Q9NWB7 429 aa24.11■■□□□ 1.45
SEMA3B-202ENST00000418576 PTCD1O75127 700 aaKnown RBP24.11■■□□□ 1.45
SEMA3B-202ENST00000418576 CAMKK2Q96RR4 588 aa24.11■■□□□ 1.45
SEMA3B-202ENST00000418576 RBM42Q9BTD8 480 aaKnown RBP24.11■■□□□ 1.45
SEMA3B-202ENST00000418576 IL16Q14005 1332 aa24.1■■□□□ 1.45
SEMA3B-202ENST00000418576 SLC27A3Q5K4L6 730 aa24.1■■□□□ 1.45
SEMA3B-202ENST00000418576 LOC102724428A0A0B4J2F2 783 aa24.09■■□□□ 1.45
SEMA3B-202ENST00000418576 CHL1O00533 1208 aa24.09■■□□□ 1.45
SEMA3B-202ENST00000418576 HMGB2P26583 209 aaKnown RBP24.09■■□□□ 1.45
SEMA3B-202ENST00000418576 SIK1P57059 783 aa24.09■■□□□ 1.45
SEMA3B-202ENST00000418576 EZH2Q15910 746 aaKnown RBP24.09■■□□□ 1.45
SEMA3B-202ENST00000418576 TXNRD1Q16881 649 aa24.09■■□□□ 1.45
SEMA3B-202ENST00000418576 CCNL1Q9UK58 526 aaPredicted RBP24.08■■□□□ 1.45
SEMA3B-202ENST00000418576 FMNL2Q96PY5 1086 aa24.08■■□□□ 1.44
SEMA3B-202ENST00000418576 ZNF521Q96K83 1311 aa24.07■■□□□ 1.44
SEMA3B-202ENST00000418576 RGPD3A6NKT7 1758 aaPredicted RBP24.07■■□□□ 1.44
SEMA3B-202ENST00000418576 RGPD4Q7Z3J3 1758 aa24.07■■□□□ 1.44
SEMA3B-202ENST00000418576 KCNQ3O43525 872 aa24.06■■□□□ 1.44
SEMA3B-202ENST00000418576 ZNF853P0CG23 659 aa24.06■■□□□ 1.44
SEMA3B-202ENST00000418576 ATP6V1AP38606 617 aa24.06■■□□□ 1.44
SEMA3B-202ENST00000418576 PAPPAQ13219 1627 aa24.06■■□□□ 1.44
SEMA3B-202ENST00000418576 PROM2Q8N271 834 aa24.06■■□□□ 1.44
SEMA3B-202ENST00000418576 ZNF496Q96IT1 587 aaPredicted RBP24.06■■□□□ 1.44
SEMA3B-202ENST00000418576 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
SEMA3B-202ENST00000418576 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
SEMA3B-202ENST00000418576 MBIPQ9NS73 344 aa24.04■■□□□ 1.44
SEMA3B-202ENST00000418576 LY75O60449 1722 aa24.04■■□□□ 1.44
SEMA3B-202ENST00000418576 MYH16Q9H6N6 1097 aa24.03■■□□□ 1.44
SEMA3B-202ENST00000418576 KCPQ6ZWJ8 1503 aa24.03■■□□□ 1.44
SEMA3B-202ENST00000418576 EIF4A1P60842 406 aaKnown RBP24.03■■□□□ 1.44
SEMA3B-202ENST00000418576 LRRC4BQ9NT99 713 aa24.02■■□□□ 1.44
SEMA3B-202ENST00000418576 HEG1Q9ULI3 1381 aa24.02■■□□□ 1.44
SEMA3B-202ENST00000418576 KCNQ4P56696 695 aa24.01■■□□□ 1.43
SEMA3B-202ENST00000418576 TEX13AQ9BXU3 409 aaPredicted RBP24.01■■□□□ 1.43
SEMA3B-202ENST00000418576 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
SEMA3B-202ENST00000418576 SNRPA1P09661 255 aaKnown RBP24.01■■□□□ 1.43
SEMA3B-202ENST00000418576 SLC4A9Q96Q91 983 aa24.01■■□□□ 1.43
SEMA3B-202ENST00000418576 UBR2Q8IWV8 1755 aa24■■□□□ 1.43
SEMA3B-202ENST00000418576 E9PSI1 815 aa24■■□□□ 1.43
SEMA3B-202ENST00000418576 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
SEMA3B-202ENST00000418576 ITPK1Q13572 414 aa23.98■■□□□ 1.43
SEMA3B-202ENST00000418576 TSR2Q969E8 191 aaKnown RBP23.98■■□□□ 1.43
SEMA3B-202ENST00000418576 SPINK5Q9NQ38 1064 aaPredicted RBP23.98■■□□□ 1.43
SEMA3B-202ENST00000418576 FANCIQ9NVI1 1328 aa23.97■■□□□ 1.43
SEMA3B-202ENST00000418576 ZNF831Q5JPB2 1677 aa23.97■■□□□ 1.43
SEMA3B-202ENST00000418576 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-202ENST00000418576 STARD3NLO95772 234 aa23.97■■□□□ 1.43
SEMA3B-202ENST00000418576 DNAJC10Q8IXB1 793 aa23.97■■□□□ 1.43
SEMA3B-202ENST00000418576 NBPF14Q5TI25 921 aa23.96■■□□□ 1.43
SEMA3B-202ENST00000418576 SLFN5Q08AF3 891 aa23.96■■□□□ 1.43
SEMA3B-202ENST00000418576 RREB1Q92766 1687 aa23.95■■□□□ 1.42
SEMA3B-202ENST00000418576 LINC00116Q8NCU8 138 aa23.95■■□□□ 1.42
SEMA3B-202ENST00000418576 CDCA7LQ96GN5 454 aa23.94■■□□□ 1.42
SEMA3B-202ENST00000418576 YTHDC1Q96MU7 727 aaKnown RBP23.94■■□□□ 1.42
SEMA3B-202ENST00000418576 HOXB7P09629 217 aa23.93■■□□□ 1.42
SEMA3B-202ENST00000418576 STK32BQ9NY57 414 aa23.93■■□□□ 1.42
SEMA3B-202ENST00000418576 USP16Q9Y5T5 823 aa23.93■■□□□ 1.42
SEMA3B-202ENST00000418576 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
SEMA3B-202ENST00000418576 CYP19A1P11511 503 aaPredicted RBP23.92■■□□□ 1.42
SEMA3B-202ENST00000418576 KRT24Q2M2I5 525 aa23.92■■□□□ 1.42
SEMA3B-202ENST00000418576 DUSP27Q5VZP5 1158 aa23.92■■□□□ 1.42
SEMA3B-202ENST00000418576 AK7Q96M32 723 aa23.92■■□□□ 1.42
SEMA3B-202ENST00000418576 C5P01031 1676 aa23.92■■□□□ 1.42
SEMA3B-202ENST00000418576 CICQ96RK0 1608 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-202ENST00000418576 RC3H1Q5TC82 1133 aaKnown RBP23.91■■□□□ 1.42
SEMA3B-202ENST00000418576 SOS1Q07889 1333 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-202ENST00000418576 CNTNAP4Q9C0A0 1308 aa23.91■■□□□ 1.42
SEMA3B-202ENST00000418576 CRKLP46109 303 aaKnown RBP23.91■■□□□ 1.42
SEMA3B-202ENST00000418576 CHMP4AQ9BY43 222 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms