RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
ATG4B-207ENST00000415107 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
ATG4B-207ENST00000415107 APBA3O96018 575 aa15.7■□□□□ 0.1
ATG4B-207ENST00000415107 HMGB2P26583 209 aaKnown RBP15.7■□□□□ 0.1
ATG4B-207ENST00000415107 RIPK4P57078 832 aa15.7■□□□□ 0.1
ATG4B-207ENST00000415107 CABP4P57796 275 aa15.7■□□□□ 0.1
ATG4B-207ENST00000415107 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
ATG4B-207ENST00000415107 APAF1O14727 1248 aa15.69■□□□□ 0.1
ATG4B-207ENST00000415107 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-207ENST00000415107 BABAM1Q9NWV8 329 aa15.69■□□□□ 0.1
ATG4B-207ENST00000415107 PALLDQ8WX93 1383 aa15.69■□□□□ 0.1
ATG4B-207ENST00000415107 NUP188Q5SRE5 1749 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 KAT6BQ8WYB5 2073 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 TEFQ10587 303 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 SLC27A3Q5K4L6 730 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 NFATC2IPQ8NCF5 419 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 TRIM35Q9UPQ4 493 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 KCPQ6ZWJ8 1503 aa15.68■□□□□ 0.1
ATG4B-207ENST00000415107 KDM3BQ7LBC6 1761 aa15.67■□□□□ 0.1
ATG4B-207ENST00000415107 FAM9BQ8IZU0 186 aa15.67■□□□□ 0.1
ATG4B-207ENST00000415107 MCM10Q7L590 875 aa15.66■□□□□ 0.1
ATG4B-207ENST00000415107 ATG3Q9NT62 314 aa15.66■□□□□ 0.1
ATG4B-207ENST00000415107 C5P01031 1676 aa15.65■□□□□ 0.1
ATG4B-207ENST00000415107 EN1Q05925 392 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-207ENST00000415107 DEFB132Q7Z7B7 95 aa15.65■□□□□ 0.1
ATG4B-207ENST00000415107 PROM2Q8N271 834 aa15.65■□□□□ 0.1
ATG4B-207ENST00000415107 CALD1Q05682 793 aaKnown RBP15.64■□□□□ 0.09
ATG4B-207ENST00000415107 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
ATG4B-207ENST00000415107 TAF7Q15545 349 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-207ENST00000415107 TXNRD1Q16881 649 aa15.64■□□□□ 0.09
ATG4B-207ENST00000415107 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
ATG4B-207ENST00000415107 ASAP1Q9ULH1 1129 aa15.64■□□□□ 0.09
ATG4B-207ENST00000415107 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
ATG4B-207ENST00000415107 EZH2Q15910 746 aaKnown RBP15.63■□□□□ 0.09
ATG4B-207ENST00000415107 ZNF790Q6PG37 636 aa15.63■□□□□ 0.09
ATG4B-207ENST00000415107 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
ATG4B-207ENST00000415107 IL16Q14005 1332 aa15.63■□□□□ 0.09
ATG4B-207ENST00000415107 COL5A3P25940 1745 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-207ENST00000415107 TJP1Q07157 1748 aa15.63■□□□□ 0.09
ATG4B-207ENST00000415107 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
ATG4B-207ENST00000415107 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
ATG4B-207ENST00000415107 SIK1P57059 783 aa15.62■□□□□ 0.09
ATG4B-207ENST00000415107 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
ATG4B-207ENST00000415107 QSER1Q2KHR3 1735 aa15.61■□□□□ 0.09
ATG4B-207ENST00000415107 ZNF853P0CG23 659 aa15.61■□□□□ 0.09
ATG4B-207ENST00000415107 WWC1Q8IX03 1113 aa15.61■□□□□ 0.09
ATG4B-207ENST00000415107 ZNF521Q96K83 1311 aa15.61■□□□□ 0.09
ATG4B-207ENST00000415107 CHL1O00533 1208 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 WDR63Q8IWG1 891 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
ATG4B-207ENST00000415107 LRRC4BQ9NT99 713 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 IFT57Q9NWB7 429 aa15.6■□□□□ 0.09
ATG4B-207ENST00000415107 CCNL1Q9UK58 526 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-207ENST00000415107 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
ATG4B-207ENST00000415107 C4BP0C0L5 1744 aa15.59■□□□□ 0.09
ATG4B-207ENST00000415107 LAMB4A4D0S4 1761 aa15.58■□□□□ 0.08
ATG4B-207ENST00000415107 FMNL2Q96PY5 1086 aa15.58■□□□□ 0.08
ATG4B-207ENST00000415107 GNAI1P63096 354 aa15.57■□□□□ 0.08
ATG4B-207ENST00000415107 SLC39A6Q13433 755 aa15.57■□□□□ 0.08
ATG4B-207ENST00000415107 ZNF496Q96IT1 587 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-207ENST00000415107 CNTNAP4Q9C0A0 1308 aa15.57■□□□□ 0.08
ATG4B-207ENST00000415107 ATP6V1AP38606 617 aa15.56■□□□□ 0.08
ATG4B-207ENST00000415107 TEX13AQ9BXU3 409 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-207ENST00000415107 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
ATG4B-207ENST00000415107 EIF4A1P60842 406 aaKnown RBP15.55■□□□□ 0.08
ATG4B-207ENST00000415107 ITPK1Q13572 414 aa15.55■□□□□ 0.08
ATG4B-207ENST00000415107 RC3H1Q5TC82 1133 aaKnown RBP15.55■□□□□ 0.08
ATG4B-207ENST00000415107 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
ATG4B-207ENST00000415107 SOS1Q07889 1333 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-207ENST00000415107 KCNQ3O43525 872 aa15.54■□□□□ 0.08
ATG4B-207ENST00000415107 PTCD1O75127 700 aaKnown RBP15.54■□□□□ 0.08
ATG4B-207ENST00000415107 HOXB7P09629 217 aa15.54■□□□□ 0.08
ATG4B-207ENST00000415107 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
ATG4B-207ENST00000415107 SNRPA1P09661 255 aaKnown RBP15.53■□□□□ 0.08
ATG4B-207ENST00000415107 SLC15A2Q16348 729 aa15.53■□□□□ 0.08
ATG4B-207ENST00000415107 NBPF14Q5TI25 921 aa15.53■□□□□ 0.08
ATG4B-207ENST00000415107 LINC00116Q8NCU8 138 aa15.53■□□□□ 0.08
ATG4B-207ENST00000415107 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
ATG4B-207ENST00000415107 ANO8Q9HCE9 1232 aaPredicted RBP15.53■□□□□ 0.08
ATG4B-207ENST00000415107 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
ATG4B-207ENST00000415107 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
ATG4B-207ENST00000415107 GIGYF1O75420 1035 aaPredicted RBP15.52■□□□□ 0.08
ATG4B-207ENST00000415107 CASZ1Q86V15 1759 aa15.52■□□□□ 0.07
ATG4B-207ENST00000415107 MYH14Q7Z406 1995 aaKnown RBP15.51■□□□□ 0.07
ATG4B-207ENST00000415107 ERBB4Q15303 1308 aa15.51■□□□□ 0.07
ATG4B-207ENST00000415107 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
ATG4B-207ENST00000415107 STK32BQ9NY57 414 aa15.51■□□□□ 0.07
ATG4B-207ENST00000415107 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
ATG4B-207ENST00000415107 STARD3NLO95772 234 aa15.5■□□□□ 0.07
ATG4B-207ENST00000415107 ADRA2BP18089 450 aa15.5■□□□□ 0.07
ATG4B-207ENST00000415107 ZNF827Q17R98 1081 aa15.5■□□□□ 0.07
ATG4B-207ENST00000415107 DNAJC10Q8IXB1 793 aa15.5■□□□□ 0.07
ATG4B-207ENST00000415107 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
ATG4B-207ENST00000415107 SSFA2P28290 1259 aa15.49■□□□□ 0.07
ATG4B-207ENST00000415107 CRKLP46109 303 aaKnown RBP15.49■□□□□ 0.07
ATG4B-207ENST00000415107 KCNQ4P56696 695 aa15.49■□□□□ 0.07
ATG4B-207ENST00000415107 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms