RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 LY75O60449 1722 aa13.45□□□□□ -0.26
TMEM248-202ENST00000413593 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
TMEM248-202ENST00000413593 PDGFDQ9GZP0 370 aaPredicted RBP13.45□□□□□ -0.26
TMEM248-202ENST00000413593 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
TMEM248-202ENST00000413593 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
TMEM248-202ENST00000413593 SIK1P57059 783 aa13.44□□□□□ -0.26
TMEM248-202ENST00000413593 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
TMEM248-202ENST00000413593 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
TMEM248-202ENST00000413593 ITGB4P16144 1822 aa13.43□□□□□ -0.26
TMEM248-202ENST00000413593 SLC52A2Q9HAB3 445 aa13.43□□□□□ -0.26
TMEM248-202ENST00000413593 MRC1P22897 1456 aa13.42□□□□□ -0.26
TMEM248-202ENST00000413593 GNAT3A8MTJ3 354 aa13.42□□□□□ -0.26
TMEM248-202ENST00000413593 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
TMEM248-202ENST00000413593 ITPK1Q13572 414 aa13.41□□□□□ -0.26
TMEM248-202ENST00000413593 SLC4A9Q96Q91 983 aa13.41□□□□□ -0.26
TMEM248-202ENST00000413593 TFCP2L1Q9NZI6 479 aa13.41□□□□□ -0.26
TMEM248-202ENST00000413593 LRP5O75197 1615 aa13.41□□□□□ -0.26
TMEM248-202ENST00000413593 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 PNPLA7Q6ZV29 1317 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 ATP6V1AP38606 617 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 LINC00116Q8NCU8 138 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 PLEKHF1Q96S99 279 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 SPON1Q9HCB6 807 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
TMEM248-202ENST00000413593 ZBTB7AO95365 584 aa13.39□□□□□ -0.27
TMEM248-202ENST00000413593 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
TMEM248-202ENST00000413593 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
TMEM248-202ENST00000413593 SCN11AQ9UI33 1791 aa13.38□□□□□ -0.27
TMEM248-202ENST00000413593 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
TMEM248-202ENST00000413593 NEFMP07197 916 aa13.38□□□□□ -0.27
TMEM248-202ENST00000413593 TEFQ10587 303 aa13.37□□□□□ -0.27
TMEM248-202ENST00000413593 SLC39A6Q13433 755 aa13.37□□□□□ -0.27
TMEM248-202ENST00000413593 AK7Q96M32 723 aa13.37□□□□□ -0.27
TMEM248-202ENST00000413593 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
TMEM248-202ENST00000413593 PNNQ9H307 717 aaKnown RBP13.37□□□□□ -0.27
TMEM248-202ENST00000413593 C5P01031 1676 aa13.37□□□□□ -0.27
TMEM248-202ENST00000413593 HTATSF1O43719 755 aaKnown RBP13.36□□□□□ -0.27
TMEM248-202ENST00000413593 AMIGO3Q86WK7 504 aa13.36□□□□□ -0.27
TMEM248-202ENST00000413593 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
TMEM248-202ENST00000413593 SLC16A10Q8TF71 515 aa13.36□□□□□ -0.27
TMEM248-202ENST00000413593 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
TMEM248-202ENST00000413593 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
TMEM248-202ENST00000413593 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
TMEM248-202ENST00000413593 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
TMEM248-202ENST00000413593 PTGER2P43116 358 aa13.35□□□□□ -0.27
TMEM248-202ENST00000413593 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMEM248-202ENST00000413593 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
TMEM248-202ENST00000413593 MCM10Q7L590 875 aa13.35□□□□□ -0.27
TMEM248-202ENST00000413593 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
TMEM248-202ENST00000413593 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
TMEM248-202ENST00000413593 GNPATO15228 680 aa13.34□□□□□ -0.27
TMEM248-202ENST00000413593 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
TMEM248-202ENST00000413593 RC3H1Q5TC82 1133 aaKnown RBP13.34□□□□□ -0.27
TMEM248-202ENST00000413593 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
TMEM248-202ENST00000413593 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
TMEM248-202ENST00000413593 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
TMEM248-202ENST00000413593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
TMEM248-202ENST00000413593 ANP32CO43423 234 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 PHF14O94880 888 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 SSFA2P28290 1259 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 SMIM5Q71RC9 77 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 TAF1LQ8IZX4 1826 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 QSER1Q2KHR3 1735 aa13.33□□□□□ -0.28
TMEM248-202ENST00000413593 DNAJC10Q8IXB1 793 aa13.32□□□□□ -0.28
TMEM248-202ENST00000413593 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
TMEM248-202ENST00000413593 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
TMEM248-202ENST00000413593 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
TMEM248-202ENST00000413593 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
TMEM248-202ENST00000413593 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
TMEM248-202ENST00000413593 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
TMEM248-202ENST00000413593 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
TMEM248-202ENST00000413593 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
TMEM248-202ENST00000413593 TUBGCP6Q96RT7 1819 aa13.31□□□□□ -0.28
TMEM248-202ENST00000413593 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
TMEM248-202ENST00000413593 KCNQ3O43525 872 aa13.3□□□□□ -0.28
TMEM248-202ENST00000413593 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
TMEM248-202ENST00000413593 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
TMEM248-202ENST00000413593 RIPK4P57078 832 aa13.3□□□□□ -0.28
TMEM248-202ENST00000413593 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
TMEM248-202ENST00000413593 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
TMEM248-202ENST00000413593 CYP19A1P11511 503 aaPredicted RBP13.29□□□□□ -0.28
TMEM248-202ENST00000413593 POLD1P28340 1107 aa13.29□□□□□ -0.28
TMEM248-202ENST00000413593 TAF7Q15545 349 aaPredicted RBP13.29□□□□□ -0.28
TMEM248-202ENST00000413593 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
TMEM248-202ENST00000413593 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
TMEM248-202ENST00000413593 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
TMEM248-202ENST00000413593 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
TMEM248-202ENST00000413593 TJP1Q07157 1748 aa13.29□□□□□ -0.28
TMEM248-202ENST00000413593 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
TMEM248-202ENST00000413593 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
TMEM248-202ENST00000413593 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
TMEM248-202ENST00000413593 ARXQ96QS3 562 aa13.28□□□□□ -0.28
TMEM248-202ENST00000413593 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
TMEM248-202ENST00000413593 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
TMEM248-202ENST00000413593 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms