RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 PLCB3Q01970 1234 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 SERINC3Q13530 473 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 ZNF394Q53GI3 561 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 TRIM50Q86XT4 487 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 AMOTL1Q8IY63 956 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 CEP89Q96ST8 783 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 IER2Q9BTL4 223 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 JADE2Q9NQC1 790 aa7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 DNAAF2Q9NVR5 837 aaKnown RBP7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 FBXO9Q9UK97 447 aaPredicted RBP7.62□□□□□ -1.19
CBX1P3-201ENST00000413296 CCER2I3L3R5 266 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 NDUFB5O43674 189 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 PLIN1O60240 522 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 VIL1P09327 827 aaKnown RBP7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 BDNFP23560 247 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 PPP4CP60510 307 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 CLDN10P78369 228 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 KCNH2Q12809 1159 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 EML3Q32P44 896 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 MAP9Q49MG5 647 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 FERMT3Q86UX7 667 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 PIP4P2Q8N4L2 257 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 RELTQ969Z4 430 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 IL17RAQ96F46 866 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 PRKD2Q9BZL6 878 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 CYLDQ9NQC7 956 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 SWAP70Q9UH65 585 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 PCDHGB7Q9Y5F8 929 aa7.61□□□□□ -1.19
CBX1P3-201ENST00000413296 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 DHX8Q14562 1220 aaKnown RBP7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 DSC3Q14574 896 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 CHRDL2Q6WN34 429 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 USP48Q86UV5 1035 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 PLPP7Q8NBV4 271 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 CCDC85AQ96PX6 553 aaPredicted RBP7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 MKNK1Q9BUB5 465 aa7.6□□□□□ -1.19
CBX1P3-201ENST00000413296 KIF3BO15066 747 aa7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 ATF4P18848 351 aaPredicted RBP7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 GUCA2AQ02747 115 aa7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 EHHADHQ08426 723 aa7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 PTCD2Q8WV60 388 aaKnown RBP7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 SRPK1Q96SB4 655 aaKnown RBP7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 NAP1L4Q99733 375 aaKnown RBP7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 TMEM121BQ9BXQ6 578 aaPredicted RBP7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 TMX4Q9H1E5 349 aaPredicted RBP7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 SFMBT1Q9UHJ3 866 aa7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 EID1Q9Y6B2 187 aa7.59□□□□□ -1.19
CBX1P3-201ENST00000413296 CDC45O75419 566 aa7.58□□□□□ -1.2
CBX1P3-201ENST00000413296 FAM13AO94988 1023 aa7.58□□□□□ -1.2
CBX1P3-201ENST00000413296 SEC13P55735 322 aa7.58□□□□□ -1.2
CBX1P3-201ENST00000413296 PRSS12P56730 875 aa7.58□□□□□ -1.2
CBX1P3-201ENST00000413296 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
CBX1P3-201ENST00000413296 PTCD1O75127 700 aaKnown RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 DKK1O94907 266 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 HSP90AA1P07900 732 aaKnown RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 LMOD3Q0VAK6 560 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 HDAC1Q13547 482 aaPredicted RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 ZRSR2Q15696 482 aaKnown RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 WDR75Q8IWA0 830 aaKnown RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 SIX5Q8N196 739 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 DMRTB1Q96MA1 342 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 HOMER2Q9NSB8 354 aa7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 THRAP3Q9Y2W1 955 aaKnown RBP7.57□□□□□ -1.2
CBX1P3-201ENST00000413296 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 CAND2O75155 1236 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 NEFMP07197 916 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 NPR3P17342 541 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 GNALP38405 381 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 GJA8P48165 433 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 CBLBQ13191 982 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 MYBPC2Q14324 1141 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 ARSHQ5FYA8 562 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 C6orf132Q5T0Z8 1188 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 HELQQ8TDG4 1101 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 EYA1Q99502 592 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 MPHOSPH6Q99547 160 aaKnown RBP7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 APBA2Q99767 749 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 C12orf49Q9H741 205 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 SRA1Q9HD15 236 aaKnown RBP7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 SIRPGQ9P1W8 387 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 NOD1Q9Y239 953 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 BOLA1Q9Y3E2 137 aa7.56□□□□□ -1.2
CBX1P3-201ENST00000413296 G3V3G9 751 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 C6orf229H3BNL8 230 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 PER1O15534 1290 aaPredicted RBP7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 NR1I2O75469 434 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 DNAJB2P25686 324 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 MAP7D1Q3KQU3 841 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 PCGF5Q86SE9 256 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 HLA-CQ95604 372 aa7.55□□□□□ -1.2
CBX1P3-201ENST00000413296 TSR2Q969E8 191 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms