RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 CCER2I3L3R5 266 aa22.27■■□□□ 1.16
PMS2P4-201ENST00000412466 MSL1Q68DK7 614 aa22.27■■□□□ 1.16
PMS2P4-201ENST00000412466 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
PMS2P4-201ENST00000412466 CYP27B1O15528 508 aa22.26■■□□□ 1.15
PMS2P4-201ENST00000412466 U2AF1L5P0DN76 240 aaPredicted RBP22.26■■□□□ 1.15
PMS2P4-201ENST00000412466 U2AF1Q01081 240 aaKnown RBP eCLIP22.26■■□□□ 1.15
PMS2P4-201ENST00000412466 SULT6B1Q6IMI4 303 aa22.26■■□□□ 1.15
PMS2P4-201ENST00000412466 AK7Q96M32 723 aa22.26■■□□□ 1.15
PMS2P4-201ENST00000412466 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
PMS2P4-201ENST00000412466 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
PMS2P4-201ENST00000412466 FCHSD2O94868 740 aa22.25■■□□□ 1.15
PMS2P4-201ENST00000412466 C1QTNF8P60827 252 aa22.25■■□□□ 1.15
PMS2P4-201ENST00000412466 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
PMS2P4-201ENST00000412466 GIGYF1O75420 1035 aaPredicted RBP22.24■■□□□ 1.15
PMS2P4-201ENST00000412466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.15
PMS2P4-201ENST00000412466 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
PMS2P4-201ENST00000412466 CD2APQ9Y5K6 639 aa22.22■■□□□ 1.15
PMS2P4-201ENST00000412466 HMOX1P09601 288 aa22.21■■□□□ 1.15
PMS2P4-201ENST00000412466 NEFMP07197 916 aa22.2■■□□□ 1.14
PMS2P4-201ENST00000412466 NKX1-1Q15270 411 aaPredicted RBP22.2■■□□□ 1.14
PMS2P4-201ENST00000412466 AMOTQ4VCS5 1084 aa22.2■■□□□ 1.14
PMS2P4-201ENST00000412466 MIER1Q8N108 512 aa22.2■■□□□ 1.14
PMS2P4-201ENST00000412466 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
PMS2P4-201ENST00000412466 TMOD3Q9NYL9 352 aa22.2■■□□□ 1.14
PMS2P4-201ENST00000412466 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.14
PMS2P4-201ENST00000412466 CCDC184Q52MB2 194 aa22.19■■□□□ 1.14
PMS2P4-201ENST00000412466 AEBP1Q8IUX7 1158 aa22.19■■□□□ 1.14
PMS2P4-201ENST00000412466 PLEKHO1Q53GL0 409 aaPredicted RBP22.18■■□□□ 1.14
PMS2P4-201ENST00000412466 PIGBQ92521 554 aa22.18■■□□□ 1.14
PMS2P4-201ENST00000412466 RSPH6AQ9H0K4 717 aa22.18■■□□□ 1.14
PMS2P4-201ENST00000412466 PHF14O94880 888 aa22.17■■□□□ 1.14
PMS2P4-201ENST00000412466 SSFA2P28290 1259 aa22.17■■□□□ 1.14
PMS2P4-201ENST00000412466 IFNL2Q8IZJ0 200 aa22.16■■□□□ 1.14
PMS2P4-201ENST00000412466 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
PMS2P4-201ENST00000412466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.15■■□□□ 1.14
PMS2P4-201ENST00000412466 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
PMS2P4-201ENST00000412466 SIK1P57059 783 aa22.15■■□□□ 1.14
PMS2P4-201ENST00000412466 PRKAR2BP31323 418 aa22.14■■□□□ 1.13
PMS2P4-201ENST00000412466 PHKG2P15735 406 aa22.13■■□□□ 1.13
PMS2P4-201ENST00000412466 ATP10DQ9P241 1426 aa22.13■■□□□ 1.13
PMS2P4-201ENST00000412466 MAPK8IP3Q9UPT6 1336 aa22.11■■□□□ 1.13
PMS2P4-201ENST00000412466 GNPATO15228 680 aa22.11■■□□□ 1.13
PMS2P4-201ENST00000412466 LINC00116Q8NCU8 138 aa22.11■■□□□ 1.13
PMS2P4-201ENST00000412466 PLEKHF1Q96S99 279 aa22.11■■□□□ 1.13
PMS2P4-201ENST00000412466 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
PMS2P4-201ENST00000412466 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
PMS2P4-201ENST00000412466 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
PMS2P4-201ENST00000412466 RUNDC1Q96C34 613 aa22.1■■□□□ 1.13
PMS2P4-201ENST00000412466 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
PMS2P4-201ENST00000412466 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
PMS2P4-201ENST00000412466 ZNF831Q5JPB2 1677 aa22.09■■□□□ 1.13
PMS2P4-201ENST00000412466 AMIGO3Q86WK7 504 aa22.08■■□□□ 1.13
PMS2P4-201ENST00000412466 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
PMS2P4-201ENST00000412466 ASAP1Q9ULH1 1129 aa22.08■■□□□ 1.13
PMS2P4-201ENST00000412466 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
PMS2P4-201ENST00000412466 ZNF530Q6P9A1 599 aaPredicted RBP22.07■■□□□ 1.12
PMS2P4-201ENST00000412466 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
PMS2P4-201ENST00000412466 ITPK1Q13572 414 aa22.06■■□□□ 1.12
PMS2P4-201ENST00000412466 MTHFSDQ2M296 383 aaKnown RBP22.06■■□□□ 1.12
PMS2P4-201ENST00000412466 GPBP1L1Q9HC44 474 aaPredicted RBP22.06■■□□□ 1.12
PMS2P4-201ENST00000412466 ADCY9O60503 1353 aa22.05■■□□□ 1.12
PMS2P4-201ENST00000412466 ATG3Q9NT62 314 aa22.05■■□□□ 1.12
PMS2P4-201ENST00000412466 COL5A3P25940 1745 aaPredicted RBP22.04■■□□□ 1.12
PMS2P4-201ENST00000412466 ERVV-2B6SEH9 535 aa22.04■■□□□ 1.12
PMS2P4-201ENST00000412466 SMIM5Q71RC9 77 aa22.04■■□□□ 1.12
PMS2P4-201ENST00000412466 RTCBQ9Y3I0 505 aaKnown RBP22.04■■□□□ 1.12
PMS2P4-201ENST00000412466 HTATSF1O43719 755 aaKnown RBP22.03■■□□□ 1.12
PMS2P4-201ENST00000412466 NFE2L2Q16236 605 aa22.03■■□□□ 1.12
PMS2P4-201ENST00000412466 DCAF5Q96JK2 942 aa22.03■■□□□ 1.12
PMS2P4-201ENST00000412466 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.12
PMS2P4-201ENST00000412466 KIF13BQ9NQT8 1826 aa22.02■■□□□ 1.12
PMS2P4-201ENST00000412466 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
PMS2P4-201ENST00000412466 CCDC146Q8IYE0 955 aa22.02■■□□□ 1.12
PMS2P4-201ENST00000412466 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
PMS2P4-201ENST00000412466 MMP10P09238 476 aa22.01■■□□□ 1.11
PMS2P4-201ENST00000412466 ADRA2BP18089 450 aa22.01■■□□□ 1.11
PMS2P4-201ENST00000412466 NCBP3Q53F19 620 aaKnown RBP22.01■■□□□ 1.11
PMS2P4-201ENST00000412466 TRAPPC3LQ5T215 181 aa22■■□□□ 1.11
PMS2P4-201ENST00000412466 NGEFQ8N5V2 710 aa22■■□□□ 1.11
PMS2P4-201ENST00000412466 WWC3Q9ULE0 1092 aa22■■□□□ 1.11
PMS2P4-201ENST00000412466 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 CABP4P57796 275 aa21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 NLGN1Q8N2Q7 840 aa21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 RTF1Q92541 710 aaKnown RBP21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 DLG5Q8TDM6 1919 aa21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
PMS2P4-201ENST00000412466 KDM6AO15550 1401 aaPredicted RBP21.98■■□□□ 1.11
PMS2P4-201ENST00000412466 PXDNLA1KZ92 1463 aa21.98■■□□□ 1.11
PMS2P4-201ENST00000412466 C4AP0C0L4 1744 aa21.98■■□□□ 1.11
PMS2P4-201ENST00000412466 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
PMS2P4-201ENST00000412466 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
PMS2P4-201ENST00000412466 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
PMS2P4-201ENST00000412466 SCN11AQ9UI33 1791 aa21.97■■□□□ 1.11
PMS2P4-201ENST00000412466 APAF1O14727 1248 aa21.97■■□□□ 1.11
PMS2P4-201ENST00000412466 RIPK4P57078 832 aa21.97■■□□□ 1.11
PMS2P4-201ENST00000412466 KIAA1551Q9HCM1 1747 aa21.97■■□□□ 1.11
PMS2P4-201ENST00000412466 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
PMS2P4-201ENST00000412466 TGFB2P61812 414 aa21.96■■□□□ 1.11
PMS2P4-201ENST00000412466 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms