RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 CWC27Q6UX04 472 aaKnown RBP16.34■□□□□ 0.21
COL6A2-204ENST00000409416 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
COL6A2-204ENST00000409416 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 SPG7Q9UQ90 795 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 GNAI2P04899 355 aa16.33■□□□□ 0.21
COL6A2-204ENST00000409416 HSPA2P54652 639 aa16.33■□□□□ 0.21
COL6A2-204ENST00000409416 STRN4Q9NRL3 753 aa16.33■□□□□ 0.21
COL6A2-204ENST00000409416 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
COL6A2-204ENST00000409416 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
COL6A2-204ENST00000409416 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
COL6A2-204ENST00000409416 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
COL6A2-204ENST00000409416 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
COL6A2-204ENST00000409416 ST18O60284 1047 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 CEP85Q6P2H3 762 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
COL6A2-204ENST00000409416 PHF8Q9UPP1 1060 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
COL6A2-204ENST00000409416 BAG4O95429 457 aaKnown RBP16.32■□□□□ 0.2
COL6A2-204ENST00000409416 FGD1P98174 961 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 RABEP1Q15276 862 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
COL6A2-204ENST00000409416 SKOR2Q2VWA4 1001 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-204ENST00000409416 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 ARHGEF40Q8TER5 1519 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
COL6A2-204ENST00000409416 ESPNB1AK53 854 aa16.31■□□□□ 0.2
COL6A2-204ENST00000409416 NASPP49321 788 aaPredicted RBP16.31■□□□□ 0.2
COL6A2-204ENST00000409416 NEO1Q92859 1461 aa16.31■□□□□ 0.2
COL6A2-204ENST00000409416 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
COL6A2-204ENST00000409416 KIAA1211Q6ZU35 1233 aa16.31■□□□□ 0.2
COL6A2-204ENST00000409416 ANKRD44Q8N8A2 993 aa16.31■□□□□ 0.2
COL6A2-204ENST00000409416 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
COL6A2-204ENST00000409416 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
COL6A2-204ENST00000409416 ARHGAP31Q2M1Z3 1444 aa16.3■□□□□ 0.2
COL6A2-204ENST00000409416 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
COL6A2-204ENST00000409416 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
COL6A2-204ENST00000409416 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 STK3Q13188 491 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 FBXW7Q969H0 707 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 USP26Q9BXU7 913 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 LRRCC1Q9C099 1032 aa16.29■□□□□ 0.2
COL6A2-204ENST00000409416 MAP2P11137 1827 aaKnown RBP16.28■□□□□ 0.2
COL6A2-204ENST00000409416 REC8O95072 547 aa16.28■□□□□ 0.2
COL6A2-204ENST00000409416 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
COL6A2-204ENST00000409416 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
COL6A2-204ENST00000409416 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
COL6A2-204ENST00000409416 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
COL6A2-204ENST00000409416 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
COL6A2-204ENST00000409416 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
COL6A2-204ENST00000409416 AK9Q5TCS8 1911 aa16.27■□□□□ 0.19
COL6A2-204ENST00000409416 SRCIN1Q9C0H9 1055 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 NEUROD6Q96NK8 337 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 TMEM131LA2VDJ0 1609 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 VPS37CA5D8V6 355 aaPredicted RBP16.26■□□□□ 0.19
COL6A2-204ENST00000409416 ERC2O15083 957 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 DDIT3P35638 169 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 NUCB2P80303 420 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
COL6A2-204ENST00000409416 MED14O60244 1454 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 CHL1O00533 1208 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 HOXC9P31274 260 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 DNAJC2Q99543 621 aaKnown RBP16.25■□□□□ 0.19
COL6A2-204ENST00000409416 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
COL6A2-204ENST00000409416 ANKLE2Q86XL3 938 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
COL6A2-204ENST00000409416 MX1P20591 662 aa16.24■□□□□ 0.19
COL6A2-204ENST00000409416 PTMSP20962 102 aa16.24■□□□□ 0.19
COL6A2-204ENST00000409416 MCCP23508 829 aa16.24■□□□□ 0.19
COL6A2-204ENST00000409416 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
COL6A2-204ENST00000409416 CPS1P31327 1500 aa16.24■□□□□ 0.19
COL6A2-204ENST00000409416 MSNP26038 577 aaKnown RBP16.24■□□□□ 0.19
COL6A2-204ENST00000409416 CLCN1P35523 988 aa16.23■□□□□ 0.19
COL6A2-204ENST00000409416 ATP7BP35670 1465 aa16.23■□□□□ 0.19
COL6A2-204ENST00000409416 PREX1Q8TCU6 1659 aa16.23■□□□□ 0.19
COL6A2-204ENST00000409416 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
COL6A2-204ENST00000409416 PDE1AP54750 535 aa16.23■□□□□ 0.19
COL6A2-204ENST00000409416 PROSER3Q2NL68 480 aa16.23■□□□□ 0.19
COL6A2-204ENST00000409416 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
COL6A2-204ENST00000409416 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
COL6A2-204ENST00000409416 FIBPO43427 364 aa16.22■□□□□ 0.19
COL6A2-204ENST00000409416 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
COL6A2-204ENST00000409416 AACSQ86V21 672 aa16.22■□□□□ 0.19
COL6A2-204ENST00000409416 PALD1Q9ULE6 856 aa16.22■□□□□ 0.19
COL6A2-204ENST00000409416 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
COL6A2-204ENST00000409416 DNTTIP2Q5QJE6 756 aaKnown RBP16.22■□□□□ 0.19
COL6A2-204ENST00000409416 KLHL40Q2TBA0 621 aa16.21■□□□□ 0.19
COL6A2-204ENST00000409416 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
COL6A2-204ENST00000409416 PIK3R4Q99570 1358 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms