RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CRTC2Q53ET0 693 aaPredicted RBP7.98□□□□□ -1.13
CLK1-202ENST00000409403 NOVA2Q9UNW9 492 aaKnown RBP7.98□□□□□ -1.13
CLK1-202ENST00000409403 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 KIAA0556O60303 1618 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L15C9J2P7 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L10C9JJH3 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L13C9JLJ4 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L11C9JVI0 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L21D6R901 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L18D6R9N7 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L22D6RA61 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L17D6RBQ6 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L19D6RCP7 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L20D6RJB6 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 USP17L24Q0WX57 530 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 POTEAQ6S8J7 498 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 TRIM50Q86XT4 487 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 ZMIZ1Q9ULJ6 1067 aa7.98□□□□□ -1.13
CLK1-202ENST00000409403 ERICH3Q5RHP9 1530 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 CARNS1A5YM72 827 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 BRD1O95696 1058 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 ATP1A2P50993 1020 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 PTK7Q13308 1070 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 OXLD1Q5BKU9 147 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 EHBP1Q8NDI1 1231 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
CLK1-202ENST00000409403 MAP4K5Q9Y4K4 846 aa7.97□□□□□ -1.13
CLK1-202ENST00000409403 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
CLK1-202ENST00000409403 TMEM164Q5U3C3 297 aa7.96□□□□□ -1.13
CLK1-202ENST00000409403 OGFOD1Q8N543 542 aa7.96□□□□□ -1.13
CLK1-202ENST00000409403 STK32AQ8WU08 396 aa7.96□□□□□ -1.13
CLK1-202ENST00000409403 ALKQ9UM73 1620 aa7.96□□□□□ -1.14
CLK1-202ENST00000409403 UHRF1BP1Q6BDS2 1440 aa7.95□□□□□ -1.14
CLK1-202ENST00000409403 PATL2C9JE40 543 aaKnown RBP7.95□□□□□ -1.14
CLK1-202ENST00000409403 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
CLK1-202ENST00000409403 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
CLK1-202ENST00000409403 ANP32EQ9BTT0 268 aa7.95□□□□□ -1.14
CLK1-202ENST00000409403 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
CLK1-202ENST00000409403 CLDN10P78369 228 aa7.95□□□□□ -1.14
CLK1-202ENST00000409403 RC3H1Q5TC82 1133 aaKnown RBP7.95□□□□□ -1.14
CLK1-202ENST00000409403 FAM200AQ8TCP9 573 aa7.95□□□□□ -1.14
CLK1-202ENST00000409403 CDCA7Q9BWT1 371 aaPredicted RBP7.95□□□□□ -1.14
CLK1-202ENST00000409403 DNAAF2Q9NVR5 837 aaKnown RBP7.95□□□□□ -1.14
CLK1-202ENST00000409403 RAB15P59190 212 aa7.94□□□□□ -1.14
CLK1-202ENST00000409403 KCNA1Q09470 495 aa7.94□□□□□ -1.14
CLK1-202ENST00000409403 USP4Q13107 963 aa7.94□□□□□ -1.14
CLK1-202ENST00000409403 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
CLK1-202ENST00000409403 LIAT1Q6ZQX7 453 aa7.94□□□□□ -1.14
CLK1-202ENST00000409403 ANKMY2Q8IV38 441 aa7.94□□□□□ -1.14
CLK1-202ENST00000409403 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
CLK1-202ENST00000409403 ZNF594Q96JF6 807 aaPredicted RBP7.94□□□□□ -1.14
CLK1-202ENST00000409403 GTF2IP78347 998 aa7.93□□□□□ -1.14
CLK1-202ENST00000409403 INTS6LQ5JSJ4 861 aaKnown RBP7.93□□□□□ -1.14
CLK1-202ENST00000409403 UACAQ9BZF9 1416 aa7.93□□□□□ -1.14
CLK1-202ENST00000409403 RAPGEF3O95398 923 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 DPYDQ12882 1025 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 CDK15Q96Q40 435 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 FANCAO15360 1455 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 NCOA1Q15788 1441 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 SIX5Q8N196 739 aa7.92□□□□□ -1.14
CLK1-202ENST00000409403 EMID1Q96A84 441 aaPredicted RBP7.92□□□□□ -1.14
CLK1-202ENST00000409403 RICTORQ6R327 1708 aa7.91□□□□□ -1.14
CLK1-202ENST00000409403 SLC19A1P41440 591 aa7.91□□□□□ -1.14
CLK1-202ENST00000409403 MPNDQ8N594 471 aa7.91□□□□□ -1.14
CLK1-202ENST00000409403 KIAA1024Q9UPX6 916 aa7.91□□□□□ -1.14
CLK1-202ENST00000409403 SETD1BQ9UPS6 1966 aaKnown RBP7.91□□□□□ -1.14
CLK1-202ENST00000409403 TNIKQ9UKE5 1360 aa7.91□□□□□ -1.14
CLK1-202ENST00000409403 ERVH48-1M5A8F1 160 aa7.9□□□□□ -1.14
CLK1-202ENST00000409403 ZBTB7BO15156 539 aaPredicted RBP7.9□□□□□ -1.14
CLK1-202ENST00000409403 MYCP01106 439 aaPredicted RBP7.9□□□□□ -1.14
CLK1-202ENST00000409403 FSHRP23945 695 aa7.9□□□□□ -1.14
CLK1-202ENST00000409403 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
CLK1-202ENST00000409403 PSME1Q06323 249 aa7.9□□□□□ -1.14
CLK1-202ENST00000409403 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
CLK1-202ENST00000409403 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.14
CLK1-202ENST00000409403 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
CLK1-202ENST00000409403 WNT7AO00755 349 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 SIAH2O43255 324 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 SWI5Q1ZZU3 235 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 POGZQ7Z3K3 1410 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 TRIM52Q96A61 297 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 IRX2Q9BZI1 471 aaPredicted RBP7.89□□□□□ -1.15
CLK1-202ENST00000409403 ARHGEF12Q9NZN5 1544 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 DKK1O94907 266 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 GRM5P41594 1212 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 SEC13P55735 322 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
CLK1-202ENST00000409403 MLECQ14165 292 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 FAM9AQ8IZU1 332 aaPredicted RBP7.89□□□□□ -1.15
CLK1-202ENST00000409403 TPCN2Q8NHX9 752 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 CLP1Q92989 425 aaKnown RBP7.89□□□□□ -1.15
CLK1-202ENST00000409403 C3P01024 1663 aa7.89□□□□□ -1.15
CLK1-202ENST00000409403 CAMSAP1Q5T5Y3 1602 aa7.88□□□□□ -1.15
CLK1-202ENST00000409403 ADH1CP00326 375 aa7.88□□□□□ -1.15
CLK1-202ENST00000409403 SCTRP47872 440 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms