RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 USP35Q9P2H5 1018 aa13.98□□□□□ -0.17
PTMA-202ENST00000409115 RGPD3A6NKT7 1758 aaPredicted RBP13.97□□□□□ -0.17
PTMA-202ENST00000409115 RGPD4Q7Z3J3 1758 aa13.97□□□□□ -0.17
PTMA-202ENST00000409115 TRIM37O94972 964 aa13.97□□□□□ -0.17
PTMA-202ENST00000409115 MAP2K5Q13163 448 aa13.97□□□□□ -0.17
PTMA-202ENST00000409115 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
PTMA-202ENST00000409115 AK7Q96M32 723 aa13.97□□□□□ -0.17
PTMA-202ENST00000409115 PCDH10Q9P2E7 1040 aa13.97□□□□□ -0.17
PTMA-202ENST00000409115 COL18A1P39060 1754 aa13.96□□□□□ -0.17
PTMA-202ENST00000409115 NUDT16Q96DE0 195 aaKnown RBP13.96□□□□□ -0.17
PTMA-202ENST00000409115 CASZ1Q86V15 1759 aa13.96□□□□□ -0.18
PTMA-202ENST00000409115 ADAM33Q9BZ11 813 aa13.95□□□□□ -0.18
PTMA-202ENST00000409115 POLR3AO14802 1390 aaPredicted RBP13.95□□□□□ -0.18
PTMA-202ENST00000409115 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
PTMA-202ENST00000409115 ACEP12821 1306 aa13.93□□□□□ -0.18
PTMA-202ENST00000409115 C6orf132Q5T0Z8 1188 aa13.93□□□□□ -0.18
PTMA-202ENST00000409115 NPDC1Q9NQX5 325 aaPredicted RBP13.93□□□□□ -0.18
PTMA-202ENST00000409115 MYOM1P52179 1685 aa13.92□□□□□ -0.18
PTMA-202ENST00000409115 SLIT3O75094 1523 aa13.92□□□□□ -0.18
PTMA-202ENST00000409115 FECHP22830 423 aa13.92□□□□□ -0.18
PTMA-202ENST00000409115 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
PTMA-202ENST00000409115 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
PTMA-202ENST00000409115 CDK19Q9BWU1 502 aa13.92□□□□□ -0.18
PTMA-202ENST00000409115 TRPM1Q7Z4N2 1603 aa13.92□□□□□ -0.18
PTMA-202ENST00000409115 PPIP5K1Q6PFW1 1433 aa13.91□□□□□ -0.18
PTMA-202ENST00000409115 APBA3O96018 575 aa13.91□□□□□ -0.18
PTMA-202ENST00000409115 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
PTMA-202ENST00000409115 USP19O94966 1318 aa13.9□□□□□ -0.18
PTMA-202ENST00000409115 ZBTB7CA1YPR0 619 aa13.9□□□□□ -0.18
PTMA-202ENST00000409115 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
PTMA-202ENST00000409115 LTN1O94822 1766 aa13.89□□□□□ -0.19
PTMA-202ENST00000409115 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
PTMA-202ENST00000409115 CPDO75976 1380 aa13.88□□□□□ -0.19
PTMA-202ENST00000409115 MON2Q7Z3U7 1717 aa13.88□□□□□ -0.19
PTMA-202ENST00000409115 IRF6O14896 467 aa13.88□□□□□ -0.19
PTMA-202ENST00000409115 NBPF8Q3BBV2 869 aa13.88□□□□□ -0.19
PTMA-202ENST00000409115 FAM196AQ6ZSG2 479 aa13.88□□□□□ -0.19
PTMA-202ENST00000409115 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
PTMA-202ENST00000409115 PARD3Q8TEW0 1356 aa13.87□□□□□ -0.19
PTMA-202ENST00000409115 EVA1CP58658 441 aa13.87□□□□□ -0.19
PTMA-202ENST00000409115 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
PTMA-202ENST00000409115 ABTB2Q8N961 1025 aa13.87□□□□□ -0.19
PTMA-202ENST00000409115 TRIM66O15016 1216 aa13.86□□□□□ -0.19
PTMA-202ENST00000409115 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
PTMA-202ENST00000409115 USP6P35125 1406 aa13.86□□□□□ -0.19
PTMA-202ENST00000409115 CRB1P82279 1406 aa13.86□□□□□ -0.19
PTMA-202ENST00000409115 KAT6BQ8WYB5 2073 aa13.86□□□□□ -0.19
PTMA-202ENST00000409115 OVOS2A0A0G2JMS6 1433 aa13.85□□□□□ -0.19
PTMA-202ENST00000409115 OVOS2A0A0J9YW53 1432 aa13.85□□□□□ -0.19
PTMA-202ENST00000409115 OVOS2Q6IE36 1432 aa13.85□□□□□ -0.19
PTMA-202ENST00000409115 TCP11L2Q8N4U5 519 aa13.85□□□□□ -0.19
PTMA-202ENST00000409115 ST18O60284 1047 aa13.84□□□□□ -0.19
PTMA-202ENST00000409115 PTPREP23469 700 aa13.84□□□□□ -0.19
PTMA-202ENST00000409115 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
PTMA-202ENST00000409115 NHSQ6T4R5 1651 aa13.84□□□□□ -0.19
PTMA-202ENST00000409115 BTAF1O14981 1849 aa13.83□□□□□ -0.2
PTMA-202ENST00000409115 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
PTMA-202ENST00000409115 PTF1AQ7RTS3 328 aa13.83□□□□□ -0.2
PTMA-202ENST00000409115 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
PTMA-202ENST00000409115 NFAT5O94916 1531 aa13.82□□□□□ -0.2
PTMA-202ENST00000409115 GCP02774 474 aa13.82□□□□□ -0.2
PTMA-202ENST00000409115 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
PTMA-202ENST00000409115 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
PTMA-202ENST00000409115 ERBB3P21860 1342 aa13.82□□□□□ -0.2
PTMA-202ENST00000409115 CENPJQ9HC77 1338 aaPredicted RBP13.82□□□□□ -0.2
PTMA-202ENST00000409115 CHD4Q14839 1912 aa13.82□□□□□ -0.2
PTMA-202ENST00000409115 USP54Q70EL1 1684 aa13.82□□□□□ -0.2
PTMA-202ENST00000409115 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
PTMA-202ENST00000409115 EMP3P54852 163 aa13.81□□□□□ -0.2
PTMA-202ENST00000409115 PDE4DQ08499 809 aa13.81□□□□□ -0.2
PTMA-202ENST00000409115 PPP1R3GB7ZBB8 358 aa13.8□□□□□ -0.2
PTMA-202ENST00000409115 NLRP13Q86W25 1043 aa13.8□□□□□ -0.2
PTMA-202ENST00000409115 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
PTMA-202ENST00000409115 COL9A1P20849 921 aa13.79□□□□□ -0.2
PTMA-202ENST00000409115 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
PTMA-202ENST00000409115 PDGFDQ9GZP0 370 aaPredicted RBP13.79□□□□□ -0.2
PTMA-202ENST00000409115 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
PTMA-202ENST00000409115 YY1P25490 414 aa13.78□□□□□ -0.2
PTMA-202ENST00000409115 PRSS12P56730 875 aa13.78□□□□□ -0.2
PTMA-202ENST00000409115 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
PTMA-202ENST00000409115 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
PTMA-202ENST00000409115 AATKQ6ZMQ8 1374 aa13.78□□□□□ -0.2
PTMA-202ENST00000409115 AMHR2Q16671 573 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 NBPF14Q5TI25 921 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 TOM1L2Q6ZVM7 507 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 MARVELD3Q96A59 401 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 CDCA7LQ96GN5 454 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
PTMA-202ENST00000409115 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
PTMA-202ENST00000409115 THRAP3Q9Y2W1 955 aaKnown RBP13.77□□□□□ -0.21
PTMA-202ENST00000409115 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
PTMA-202ENST00000409115 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
PTMA-202ENST00000409115 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
PTMA-202ENST00000409115 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
PTMA-202ENST00000409115 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
PTMA-202ENST00000409115 ABCC6O95255 1503 aa13.75□□□□□ -0.21
PTMA-202ENST00000409115 KCNQ2O43526 872 aa13.75□□□□□ -0.21
PTMA-202ENST00000409115 DDB1Q16531 1140 aa13.75□□□□□ -0.21
PTMA-202ENST00000409115 AXIN2Q9Y2T1 843 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms