RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.1■□□□□ 0.012e-9■■□□□ 13.2
ILF3-202ENST00000407004 ERBB4Q15303 1308 aa15.1■□□□□ 0.01
ILF3-202ENST00000407004 ATRNO75882 1429 aa15.1■□□□□ 0.01
ILF3-202ENST00000407004 C20orf194Q5TEA3 1177 aa15.1■□□□□ 0.01
ILF3-202ENST00000407004 KIAA0232Q92628 1395 aa15.09■□□□□ 0.01
ILF3-202ENST00000407004 MRE11P49959 708 aa15.09■□□□□ 0.01
ILF3-202ENST00000407004 CENPQQ7L2Z9 268 aaPredicted RBP15.09■□□□□ 0.01
ILF3-202ENST00000407004 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
ILF3-202ENST00000407004 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0.01
ILF3-202ENST00000407004 WDR17Q8IZU2 1322 aa15.08■□□□□ 0.01
ILF3-202ENST00000407004 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
ILF3-202ENST00000407004 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
ILF3-202ENST00000407004 EMILIN1Q9Y6C2 1016 aa15.07■□□□□ 0
ILF3-202ENST00000407004 KDM3BQ7LBC6 1761 aa15.06■□□□□ 0
ILF3-202ENST00000407004 HTATSF1O43719 755 aaKnown RBP15.06■□□□□ 0
ILF3-202ENST00000407004 BCL9LQ86UU0 1499 aa15.06■□□□□ 0
ILF3-202ENST00000407004 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
ILF3-202ENST00000407004 ZNF521Q96K83 1311 aa15.06■□□□□ 0
ILF3-202ENST00000407004 RGS22Q8NE09 1264 aa15.05■□□□□ 0
ILF3-202ENST00000407004 FSD2A1L4K1 749 aa15.05■□□□□ -0
ILF3-202ENST00000407004 TRAK2O60296 914 aa15.05■□□□□ -0
ILF3-202ENST00000407004 CARD10Q9BWT7 1032 aa15.05■□□□□ -0
ILF3-202ENST00000407004 RGPD3A6NKT7 1758 aaPredicted RBP15.05■□□□□ -0
ILF3-202ENST00000407004 RGPD4Q7Z3J3 1758 aa15.05■□□□□ -0
ILF3-202ENST00000407004 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
ILF3-202ENST00000407004 DDX17Q92841 729 aaKnown RBP15.04■□□□□ -0
ILF3-202ENST00000407004 HDAC5Q9UQL6 1122 aa15.04■□□□□ -0
ILF3-202ENST00000407004 GLI3P10071 1580 aa15.04■□□□□ -0
ILF3-202ENST00000407004 RUNDC1Q96C34 613 aa15.04■□□□□ -0
ILF3-202ENST00000407004 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
ILF3-202ENST00000407004 IL16Q14005 1332 aa15.03■□□□□ -0
ILF3-202ENST00000407004 MCM4P33991 863 aa15.03■□□□□ -0
ILF3-202ENST00000407004 BARGINQ6ZT62 677 aa15.03■□□□□ -0
ILF3-202ENST00000407004 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.02■□□□□ -0
ILF3-202ENST00000407004 AMPHP49418 695 aa15.02□□□□□ -0.01
ILF3-202ENST00000407004 BABAM1Q9NWV8 329 aa15.02□□□□□ -0.01
ILF3-202ENST00000407004 CHRM1P11229 460 aaPredicted RBP15.02□□□□□ -0.01
ILF3-202ENST00000407004 PDE3BQ13370 1112 aa15.02□□□□□ -0.01
ILF3-202ENST00000407004 TNS2Q63HR2 1409 aa15.02□□□□□ -0.01
ILF3-202ENST00000407004 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
ILF3-202ENST00000407004 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
ILF3-202ENST00000407004 HSPA1LP34931 641 aa15.01□□□□□ -0.01
ILF3-202ENST00000407004 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
ILF3-202ENST00000407004 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.017e-6■■□□□ 11.4
ILF3-202ENST00000407004 PPP4R3BQ5MIZ7 849 aa15□□□□□ -0.01
ILF3-202ENST00000407004 MPNDQ8N594 471 aa15□□□□□ -0.01
ILF3-202ENST00000407004 UPF2Q9HAU5 1272 aaKnown RBP15□□□□□ -0.01
ILF3-202ENST00000407004 SEC24BO95487 1268 aa15□□□□□ -0.01
ILF3-202ENST00000407004 VPS72Q15906 364 aa15□□□□□ -0.01
ILF3-202ENST00000407004 HSP90AB2PQ58FF8 381 aa15□□□□□ -0.01
ILF3-202ENST00000407004 FAM83GA6ND36 823 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
ILF3-202ENST00000407004 ANKRD24Q8TF21 1146 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 OS9Q13438 667 aaPredicted RBP14.99□□□□□ -0.01
ILF3-202ENST00000407004 AMOTQ4VCS5 1084 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 TOGARAM1Q9Y4F4 1720 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 KDM2BQ8NHM5 1336 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 EYA1Q99502 592 aa14.99□□□□□ -0.01
ILF3-202ENST00000407004 ONECUT3O60422 494 aaPredicted RBP14.98□□□□□ -0.01
ILF3-202ENST00000407004 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 MEGF6O75095 1541 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 SPATA31A5Q5VU36 1347 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 SPATA31A7Q8IWB4 1347 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 MAP7D2Q96T17 732 aa14.98□□□□□ -0.01
ILF3-202ENST00000407004 RREB1Q92766 1687 aa14.97□□□□□ -0.01
ILF3-202ENST00000407004 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
ILF3-202ENST00000407004 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
ILF3-202ENST00000407004 RIPK4P57078 832 aa14.96□□□□□ -0.01
ILF3-202ENST00000407004 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
ILF3-202ENST00000407004 SOS1Q07889 1333 aaPredicted RBP14.96□□□□□ -0.01
ILF3-202ENST00000407004 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
ILF3-202ENST00000407004 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
ILF3-202ENST00000407004 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
ILF3-202ENST00000407004 SPATA31A1Q5TZJ5 1347 aa14.96□□□□□ -0.01
ILF3-202ENST00000407004 PRDM11Q9NQV5 511 aa14.96□□□□□ -0.02
ILF3-202ENST00000407004 UNC5CLQ8IV45 518 aa14.95□□□□□ -0.02
ILF3-202ENST00000407004 PIP4K2BP78356 416 aa14.95□□□□□ -0.02
ILF3-202ENST00000407004 SMAP1Q8IYB5 467 aaPredicted RBP14.95□□□□□ -0.02
ILF3-202ENST00000407004 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
ILF3-202ENST00000407004 ANTXR1Q9H6X2 564 aa14.95□□□□□ -0.02
ILF3-202ENST00000407004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.94□□□□□ -0.02
ILF3-202ENST00000407004 NFE2L2Q16236 605 aa14.94□□□□□ -0.02
ILF3-202ENST00000407004 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.94□□□□□ -0.02
ILF3-202ENST00000407004 N4BP2Q86UW6 1770 aaPredicted RBP14.94□□□□□ -0.02
ILF3-202ENST00000407004 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
ILF3-202ENST00000407004 SBF2Q86WG5 1849 aa14.94□□□□□ -0.02
ILF3-202ENST00000407004 NBPF6Q5VWK0 638 aa14.93□□□□□ -0.02
ILF3-202ENST00000407004 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
ILF3-202ENST00000407004 NBPF4Q96M43 638 aa14.93□□□□□ -0.02
ILF3-202ENST00000407004 ITGB4P16144 1822 aa14.93□□□□□ -0.02
ILF3-202ENST00000407004 NUTM2GQ5VZR2 741 aa14.92□□□□□ -0.02
ILF3-202ENST00000407004 MAP3K5Q99683 1374 aa14.92□□□□□ -0.02
ILF3-202ENST00000407004 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.92□□□□□ -0.02
ILF3-202ENST00000407004 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
ILF3-202ENST00000407004 UQCRHLA0A096LP55 91 aa14.91□□□□□ -0.02
ILF3-202ENST00000407004 OFD1O75665 1012 aa14.91□□□□□ -0.02
ILF3-202ENST00000407004 UQCRHP07919 91 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms