RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 INSRP06213 1382 aa11.12□□□□□ -0.63
GPC3-203ENST00000406757 NHSQ6T4R5 1651 aa11.11□□□□□ -0.63
GPC3-203ENST00000406757 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
GPC3-203ENST00000406757 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
GPC3-203ENST00000406757 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
GPC3-203ENST00000406757 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
GPC3-203ENST00000406757 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
GPC3-203ENST00000406757 MTFR1LQ9H019 292 aa11.1□□□□□ -0.63
GPC3-203ENST00000406757 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
GPC3-203ENST00000406757 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
GPC3-203ENST00000406757 RGPD2P0DJD1 1756 aa11.09□□□□□ -0.63
GPC3-203ENST00000406757 KIF24Q5T7B8 1368 aa11.09□□□□□ -0.63
GPC3-203ENST00000406757 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
GPC3-203ENST00000406757 LHX8Q68G74 356 aa11.08□□□□□ -0.64
GPC3-203ENST00000406757 DDX54Q8TDD1 881 aaKnown RBP11.08□□□□□ -0.64
GPC3-203ENST00000406757 SGIP1Q9BQI5 828 aa11.08□□□□□ -0.64
GPC3-203ENST00000406757 LRRC4BQ9NT99 713 aa11.08□□□□□ -0.64
GPC3-203ENST00000406757 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
GPC3-203ENST00000406757 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
GPC3-203ENST00000406757 PRKAR2BP31323 418 aa11.07□□□□□ -0.64
GPC3-203ENST00000406757 ARXQ96QS3 562 aa11.07□□□□□ -0.64
GPC3-203ENST00000406757 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
GPC3-203ENST00000406757 RRP7AQ9Y3A4 280 aaKnown RBP11.07□□□□□ -0.64
GPC3-203ENST00000406757 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
GPC3-203ENST00000406757 BTAF1O14981 1849 aa11.07□□□□□ -0.64
GPC3-203ENST00000406757 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
GPC3-203ENST00000406757 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
GPC3-203ENST00000406757 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
GPC3-203ENST00000406757 APAF1O14727 1248 aa11.05□□□□□ -0.64
GPC3-203ENST00000406757 FCHSD2O94868 740 aa11.05□□□□□ -0.64
GPC3-203ENST00000406757 KCNQ4P56696 695 aa11.05□□□□□ -0.64
GPC3-203ENST00000406757 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
GPC3-203ENST00000406757 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
GPC3-203ENST00000406757 ZNF784Q8NCA9 323 aaPredicted RBP11.05□□□□□ -0.64
GPC3-203ENST00000406757 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
GPC3-203ENST00000406757 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
GPC3-203ENST00000406757 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
GPC3-203ENST00000406757 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
GPC3-203ENST00000406757 SLC27A3Q5K4L6 730 aa11.03□□□□□ -0.64
GPC3-203ENST00000406757 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
GPC3-203ENST00000406757 MTHFSDQ2M296 383 aaKnown RBP11.02□□□□□ -0.65
GPC3-203ENST00000406757 TFCP2L1Q9NZI6 479 aa11.02□□□□□ -0.65
GPC3-203ENST00000406757 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
GPC3-203ENST00000406757 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.65
GPC3-203ENST00000406757 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
GPC3-203ENST00000406757 GPR162Q16538 588 aa11.01□□□□□ -0.65
GPC3-203ENST00000406757 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
GPC3-203ENST00000406757 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
GPC3-203ENST00000406757 MEGF6O75095 1541 aa11□□□□□ -0.65
GPC3-203ENST00000406757 NEFMP07197 916 aa11□□□□□ -0.65
GPC3-203ENST00000406757 POTEIP0CG38 1075 aa11□□□□□ -0.65
GPC3-203ENST00000406757 TATP17735 454 aaPredicted RBP11□□□□□ -0.65
GPC3-203ENST00000406757 POLD1P28340 1107 aa11□□□□□ -0.65
GPC3-203ENST00000406757 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
GPC3-203ENST00000406757 RIPK4P57078 832 aa11□□□□□ -0.65
GPC3-203ENST00000406757 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
GPC3-203ENST00000406757 SLC16A10Q8TF71 515 aa11□□□□□ -0.65
GPC3-203ENST00000406757 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
GPC3-203ENST00000406757 PNNQ9H307 717 aaKnown RBP11□□□□□ -0.65
GPC3-203ENST00000406757 KAT6BQ8WYB5 2073 aa11□□□□□ -0.65
GPC3-203ENST00000406757 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
GPC3-203ENST00000406757 KDRP35968 1356 aa11□□□□□ -0.65
GPC3-203ENST00000406757 CLCN6P51797 869 aa10.99□□□□□ -0.65
GPC3-203ENST00000406757 DCTN1Q14203 1278 aa10.99□□□□□ -0.65
GPC3-203ENST00000406757 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
GPC3-203ENST00000406757 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
GPC3-203ENST00000406757 NFE2L2Q16236 605 aa10.98□□□□□ -0.65
GPC3-203ENST00000406757 PLEKHO1Q53GL0 409 aaPredicted RBP10.98□□□□□ -0.65
GPC3-203ENST00000406757 NLGN2Q8NFZ4 835 aa10.98□□□□□ -0.65
GPC3-203ENST00000406757 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
GPC3-203ENST00000406757 NCAPD2Q15021 1401 aa10.98□□□□□ -0.65
GPC3-203ENST00000406757 QSER1Q2KHR3 1735 aa10.98□□□□□ -0.65
GPC3-203ENST00000406757 TUBGCP6Q96RT7 1819 aa10.98□□□□□ -0.65
GPC3-203ENST00000406757 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
GPC3-203ENST00000406757 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
GPC3-203ENST00000406757 CHD4Q14839 1912 aa10.96□□□□□ -0.65
GPC3-203ENST00000406757 LY75O60449 1722 aa10.96□□□□□ -0.65
GPC3-203ENST00000406757 MCM10Q7L590 875 aa10.96□□□□□ -0.65
GPC3-203ENST00000406757 COL23A1Q86Y22 540 aaPredicted RBP10.96□□□□□ -0.65
GPC3-203ENST00000406757 C1QTNF8P60827 252 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 MSL1Q68DK7 614 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 MPRIPQ6WCQ1 1025 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 GAS2L2Q8NHY3 880 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 LGR6Q9HBX8 967 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 COL24A1Q17RW2 1714 aa10.95□□□□□ -0.66
GPC3-203ENST00000406757 CYP27B1O15528 508 aa10.94□□□□□ -0.66
GPC3-203ENST00000406757 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
GPC3-203ENST00000406757 WWC1Q8IX03 1113 aa10.94□□□□□ -0.66
GPC3-203ENST00000406757 LAS1LQ9Y4W2 734 aaKnown RBP10.94□□□□□ -0.66
GPC3-203ENST00000406757 PCDH11XQ9BZA7 1347 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 PCDH11YQ9BZA8 1340 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 GNAT3A8MTJ3 354 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 PHKG2P15735 406 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.66
GPC3-203ENST00000406757 C1orf141Q5JVX7 400 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 IL17REQ8NFR9 667 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
GPC3-203ENST00000406757 PALLDQ8WX93 1383 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms