RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 ZCCHC11Q5TAX3 1644 aaKnown RBP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 GOLGA6L4A6NEF3 574 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 APBB1O00213 710 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ELL2O00472 640 aaPredicted RBP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 STX6O43752 255 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 F13A1P00488 732 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 PDCP20941 246 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 CHMLP26374 656 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ATP2B3Q16720 1220 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 TSPYL6Q8N831 410 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 C8orf58Q8NAV2 365 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ZNF397Q8NF99 534 aaPredicted RBP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ZNF830Q96NB3 372 aaPredicted RBP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 SH2B1Q9NRF2 756 aaPredicted RBP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 SLC52A1Q9NWF4 448 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 LIMCH1Q9UPQ0 1083 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 CCDC171Q6TFL3 1326 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ARHGEF10O15013 1369 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 AATKQ6ZMQ8 1374 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 RPAP1Q9BWH6 1393 aaPredicted RBP5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 NPATQ14207 1427 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 ATP7BP35670 1465 aa5.39□□□□□ -1.55
HDGFP1-201ENST00000405943 MROH2AA6NES4 1674 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 ZBTB7CA1YPR0 619 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 SPDYE4A6NLX3 237 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 FIBPO43427 364 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 NRDCO43847 1150 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 RAB11FIP3O75154 756 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 GADD45BO75293 160 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 TUBB4AP04350 444 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 HMOX1P09601 288 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 U2AF2P26368 475 aaKnown RBP eCLIP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 CDC25BP30305 580 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 HSPA4P34932 840 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 IL13P35225 146 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 KRT85P78386 507 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 MAP3K11Q16584 847 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 TPD52L1Q16890 204 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 OTUD7AQ8TE49 926 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 RUFY2Q8WXA3 655 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 BBXQ8WY36 941 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 RILPL2Q969X0 211 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 PHACTR3Q96KR7 559 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 TIGD1Q96MW7 591 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 DNAJC2Q99543 621 aaKnown RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 STK31Q9BXU1 1019 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 CHMP4AQ9BY43 222 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 SCAND2PQ9GZW5 306 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 NUP62CLQ9H1M0 184 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 DDX19AQ9NUU7 478 aaKnown RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 POLKQ9UBT6 870 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 STAP2Q9UGK3 403 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 DDX41Q9UJV9 622 aaKnown RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 CNPY2Q9Y2B0 182 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 MORC2Q9Y6X9 1032 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 SOS1Q07889 1333 aaPredicted RBP5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 MSH6P52701 1360 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 HECW2Q9P2P5 1572 aa5.38□□□□□ -1.55
HDGFP1-201ENST00000405943 ANKRD26Q9UPS8 1709 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 PPLO60437 1756 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 CHL1O00533 1208 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 SMARCA5O60264 1052 aaPredicted RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 TNNT1P13805 278 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 SYT1P21579 422 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 SLC20A2Q08357 652 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 NCBP1Q09161 790 aaKnown RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 SLFNL1Q499Z3 407 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 HSP90AB4PQ58FF6 505 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 NOL8Q76FK4 1167 aaKnown RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 CNTROBQ8N137 903 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 SPC24Q8NBT2 197 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 COG3Q96JB2 828 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 PRAM1Q96QH2 718 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 THUMPD2Q9BTF0 503 aaKnown RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 FUCA2Q9BTY2 467 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 CDK19Q9BWU1 502 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 TRIM5Q9C035 493 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 TNMDQ9H2S6 317 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 GDPD2Q9HCC8 539 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 CABP1Q9NZU7 370 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 STK26Q9P289 416 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 CTNNA3Q9UI47 895 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 PPP6R1Q9UPN7 881 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 ELP1O95163 1332 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 MINK1Q8N4C8 1332 aaPredicted RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 EDC4Q6P2E9 1401 aaKnown RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 YTHDC2Q9H6S0 1430 aaKnown RBP5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 CD163L1Q9NR16 1453 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 ABCC3O15438 1527 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 NEXMIFQ5QGS0 1516 aa5.37□□□□□ -1.55
HDGFP1-201ENST00000405943 GOLGA6L19H0YKK7 550 aa5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 CTAGE5O15320 804 aa5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 SLC4A2P04920 1241 aa5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 ZKSCAN1P17029 563 aaPredicted RBP5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 PTGS1P23219 599 aa5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 PSMA5P28066 241 aa5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 TYRO3Q06418 890 aa5.36□□□□□ -1.55
HDGFP1-201ENST00000405943 SAFB2Q14151 953 aaKnown RBP eCLIP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms