RNA–Protein interactions for RNA: ENST00000403642.5

CHEK2-207, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CHEK2, Length 1,359 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-207ENST00000403642 SIK1P57059 783 aa13.61□□□□□ -0.23
CHEK2-207ENST00000403642 MTFR1LQ9H019 292 aa13.61□□□□□ -0.23
CHEK2-207ENST00000403642 PTGER2P43116 358 aa13.6□□□□□ -0.23
CHEK2-207ENST00000403642 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
CHEK2-207ENST00000403642 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
CHEK2-207ENST00000403642 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
CHEK2-207ENST00000403642 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
CHEK2-207ENST00000403642 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
CHEK2-207ENST00000403642 PRKAR2BP31323 418 aa13.59□□□□□ -0.23
CHEK2-207ENST00000403642 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
CHEK2-207ENST00000403642 LINC00116Q8NCU8 138 aa13.59□□□□□ -0.23
CHEK2-207ENST00000403642 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
CHEK2-207ENST00000403642 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.23
CHEK2-207ENST00000403642 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.23
CHEK2-207ENST00000403642 ATP6V1AP38606 617 aa13.58□□□□□ -0.23
CHEK2-207ENST00000403642 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.23
CHEK2-207ENST00000403642 ITPK1Q13572 414 aa13.58□□□□□ -0.23
CHEK2-207ENST00000403642 LGR6Q9HBX8 967 aa13.58□□□□□ -0.23
CHEK2-207ENST00000403642 COL5A3P25940 1745 aaPredicted RBP13.58□□□□□ -0.24
CHEK2-207ENST00000403642 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 AK7Q96M32 723 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.24
CHEK2-207ENST00000403642 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
CHEK2-207ENST00000403642 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
CHEK2-207ENST00000403642 RALBP1Q15311 655 aa13.57□□□□□ -0.24
CHEK2-207ENST00000403642 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
CHEK2-207ENST00000403642 SLC16A10Q8TF71 515 aa13.57□□□□□ -0.24
CHEK2-207ENST00000403642 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
CHEK2-207ENST00000403642 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
CHEK2-207ENST00000403642 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
CHEK2-207ENST00000403642 CICQ96RK0 1608 aaPredicted RBP13.56□□□□□ -0.24
CHEK2-207ENST00000403642 TJP1Q07157 1748 aa13.56□□□□□ -0.24
CHEK2-207ENST00000403642 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
CHEK2-207ENST00000403642 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
CHEK2-207ENST00000403642 PHF14O94880 888 aa13.55□□□□□ -0.24
CHEK2-207ENST00000403642 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
CHEK2-207ENST00000403642 GNPATO15228 680 aa13.54□□□□□ -0.24
CHEK2-207ENST00000403642 FCHSD2O94868 740 aa13.54□□□□□ -0.24
CHEK2-207ENST00000403642 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
CHEK2-207ENST00000403642 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
CHEK2-207ENST00000403642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
CHEK2-207ENST00000403642 SSFA2P28290 1259 aa13.53□□□□□ -0.24
CHEK2-207ENST00000403642 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
CHEK2-207ENST00000403642 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
CHEK2-207ENST00000403642 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
CHEK2-207ENST00000403642 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
CHEK2-207ENST00000403642 MYBBP1AQ9BQG0 1328 aaKnown RBP13.53□□□□□ -0.24
CHEK2-207ENST00000403642 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
CHEK2-207ENST00000403642 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
CHEK2-207ENST00000403642 ARXQ96QS3 562 aa13.52□□□□□ -0.25
CHEK2-207ENST00000403642 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
CHEK2-207ENST00000403642 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
CHEK2-207ENST00000403642 POLD1P28340 1107 aa13.51□□□□□ -0.25
CHEK2-207ENST00000403642 TEFQ10587 303 aa13.5□□□□□ -0.25
CHEK2-207ENST00000403642 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
CHEK2-207ENST00000403642 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
CHEK2-207ENST00000403642 PLEKHF1Q96S99 279 aa13.49□□□□□ -0.25
CHEK2-207ENST00000403642 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
CHEK2-207ENST00000403642 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
CHEK2-207ENST00000403642 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
CHEK2-207ENST00000403642 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
CHEK2-207ENST00000403642 TTC5Q8N0Z6 440 aa13.48□□□□□ -0.25
CHEK2-207ENST00000403642 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
CHEK2-207ENST00000403642 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
CHEK2-207ENST00000403642 NEFMP07197 916 aa13.47□□□□□ -0.25
CHEK2-207ENST00000403642 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
CHEK2-207ENST00000403642 ZNF790Q6PG37 636 aa13.47□□□□□ -0.25
CHEK2-207ENST00000403642 MCM10Q7L590 875 aa13.47□□□□□ -0.25
CHEK2-207ENST00000403642 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
CHEK2-207ENST00000403642 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
CHEK2-207ENST00000403642 MAPK8IP3Q9UPT6 1336 aa13.46□□□□□ -0.25
CHEK2-207ENST00000403642 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
CHEK2-207ENST00000403642 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.25
CHEK2-207ENST00000403642 UTRNP46939 3433 aa13.46□□□□□ -0.25
CHEK2-207ENST00000403642 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.26
CHEK2-207ENST00000403642 ZNF316A6NFI3 1004 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
CHEK2-207ENST00000403642 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
CHEK2-207ENST00000403642 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
CHEK2-207ENST00000403642 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 CYP19A1P11511 503 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 INTS5Q6P9B9 1019 aaKnown RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
CHEK2-207ENST00000403642 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
CHEK2-207ENST00000403642 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
CHEK2-207ENST00000403642 KCNQ3O43525 872 aa13.44□□□□□ -0.26
CHEK2-207ENST00000403642 RFC4P35249 363 aa13.44□□□□□ -0.26
CHEK2-207ENST00000403642 NFE2L2Q16236 605 aa13.44□□□□□ -0.26
CHEK2-207ENST00000403642 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
CHEK2-207ENST00000403642 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
CHEK2-207ENST00000403642 NLGN2Q8NFZ4 835 aa13.43□□□□□ -0.26
CHEK2-207ENST00000403642 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
CHEK2-207ENST00000403642 COL15A1P39059 1388 aa13.42□□□□□ -0.26
CHEK2-207ENST00000403642 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms