RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 PRDM11Q9NQV5 511 aa21.02■□□□□ 0.96
SNED1-204ENST00000401884 KDM4AO75164 1064 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 CEP126Q9P2H0 1117 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 PTPRTO14522 1441 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 ANXA1P04083 346 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 TRIM35Q9UPQ4 493 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 TPM1P09493 284 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 PDE1AP54750 535 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 KRT32Q14532 448 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 TMX4Q9H1E5 349 aaPredicted RBP21.01■□□□□ 0.95
SNED1-204ENST00000401884 DCTPP1Q9H773 170 aa21.01■□□□□ 0.95
SNED1-204ENST00000401884 CCDC8Q9H0W5 538 aaPredicted RBP21.01■□□□□ 0.95
SNED1-204ENST00000401884 NCKAP5LQ9HCH0 1330 aa21■□□□□ 0.95
SNED1-204ENST00000401884 FKBP4Q02790 459 aaKnown RBP eCLIP21■□□□□ 0.95
SNED1-204ENST00000401884 STK38Q15208 465 aa21■□□□□ 0.95
SNED1-204ENST00000401884 SNX21Q969T3 373 aa21■□□□□ 0.95
SNED1-204ENST00000401884 MARCH6O60337 910 aa21■□□□□ 0.95
SNED1-204ENST00000401884 CCDC57Q2TAC2 916 aa21■□□□□ 0.95
SNED1-204ENST00000401884 ZNF396Q96N95 335 aaPredicted RBP21■□□□□ 0.95
SNED1-204ENST00000401884 TSR1Q2NL82 804 aaKnown RBP20.99■□□□□ 0.95
SNED1-204ENST00000401884 KIF6Q6ZMV9 814 aa20.99■□□□□ 0.95
SNED1-204ENST00000401884 SPATA32Q96LK8 384 aa20.99■□□□□ 0.95
SNED1-204ENST00000401884 LARP6Q9BRS8 491 aaKnown RBP20.99■□□□□ 0.95
SNED1-204ENST00000401884 ZBTB7BO15156 539 aaPredicted RBP20.99■□□□□ 0.95
SNED1-204ENST00000401884 TTC39AQ5SRH9 613 aa20.99■□□□□ 0.95
SNED1-204ENST00000401884 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
SNED1-204ENST00000401884 LIMCH1Q9UPQ0 1083 aa20.99■□□□□ 0.95
SNED1-204ENST00000401884 UHRF1BP1LA0JNW5 1464 aa20.99■□□□□ 0.95
SNED1-204ENST00000401884 ATP2B1P20020 1258 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 ME1P48163 572 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 GDPD2Q9HCC8 539 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 RIMS2Q9UQ26 1411 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 MAGI2Q86UL8 1455 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 HMGN5P82970 282 aaKnown RBP20.98■□□□□ 0.95
SNED1-204ENST00000401884 KLHL40Q2TBA0 621 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 ECHDC1Q9NTX5 307 aa20.98■□□□□ 0.95
SNED1-204ENST00000401884 G3V3G9 751 aa20.97■□□□□ 0.95
SNED1-204ENST00000401884 DCAF8Q5TAQ9 597 aa20.97■□□□□ 0.95
SNED1-204ENST00000401884 TNRQ92752 1358 aa20.97■□□□□ 0.95
SNED1-204ENST00000401884 NPATQ14207 1427 aa20.97■□□□□ 0.95
SNED1-204ENST00000401884 YTHDC2Q9H6S0 1430 aaKnown RBP20.97■□□□□ 0.95
SNED1-204ENST00000401884 NUP62CLQ9H1M0 184 aa20.97■□□□□ 0.95
SNED1-204ENST00000401884 DDX11Q96FC9 970 aa20.97■□□□□ 0.95
SNED1-204ENST00000401884 BCL11BQ9C0K0 894 aaPredicted RBP20.97■□□□□ 0.95
SNED1-204ENST00000401884 XRCC6P12956 609 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNED1-204ENST00000401884 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
SNED1-204ENST00000401884 RBM10P98175 930 aaKnown RBP20.96■□□□□ 0.95
SNED1-204ENST00000401884 MTHFSDQ2M296 383 aaKnown RBP20.96■□□□□ 0.95
SNED1-204ENST00000401884 MAP7D2Q96T17 732 aa20.96■□□□□ 0.95
SNED1-204ENST00000401884 MYD88Q99836 296 aa20.96■□□□□ 0.95
SNED1-204ENST00000401884 ATP7AQ04656 1500 aa20.96■□□□□ 0.95
SNED1-204ENST00000401884 KDM5CP41229 1560 aa20.96■□□□□ 0.95
SNED1-204ENST00000401884 ARHGEF5Q12774 1597 aa20.96■□□□□ 0.95
SNED1-204ENST00000401884 RHPN1Q8TCX5 695 aa20.96■□□□□ 0.95
SNED1-204ENST00000401884 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.95
SNED1-204ENST00000401884 PIK3R4Q99570 1358 aa20.95■□□□□ 0.94
SNED1-204ENST00000401884 PTCD1O75127 700 aaKnown RBP20.95■□□□□ 0.94
SNED1-204ENST00000401884 TMX3Q96JJ7 454 aa20.95■□□□□ 0.94
SNED1-204ENST00000401884 TTC21AQ8NDW8 1320 aa20.95■□□□□ 0.94
SNED1-204ENST00000401884 SART3Q15020 963 aaKnown RBP20.95■□□□□ 0.94
SNED1-204ENST00000401884 CEP85Q6P2H3 762 aa20.95■□□□□ 0.94
SNED1-204ENST00000401884 CCDC85AQ96PX6 553 aaPredicted RBP20.95■□□□□ 0.94
SNED1-204ENST00000401884 SH2B1Q9NRF2 756 aaPredicted RBP20.95■□□□□ 0.94
SNED1-204ENST00000401884 HYPKQ9NX55 129 aa20.95■□□□□ 0.94
SNED1-204ENST00000401884 PLEKHM2Q8IWE5 1019 aa20.94■□□□□ 0.94
SNED1-204ENST00000401884 CFAP45Q9UL16 551 aa20.94■□□□□ 0.94
SNED1-204ENST00000401884 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
SNED1-204ENST00000401884 AMOTL1Q8IY63 956 aa20.94■□□□□ 0.94
SNED1-204ENST00000401884 ANKRD20A12PQ8NF67 263 aa20.94■□□□□ 0.94
SNED1-204ENST00000401884 NOL10Q9BSC4 688 aaKnown RBP20.94■□□□□ 0.94
SNED1-204ENST00000401884 MAP3K2Q9Y2U5 619 aa20.94■□□□□ 0.94
SNED1-204ENST00000401884 ZFYVE9O95405 1425 aa20.94■□□□□ 0.94
SNED1-204ENST00000401884 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNED1-204ENST00000401884 OLFM4Q6UX06 510 aa20.93■□□□□ 0.94
SNED1-204ENST00000401884 MTERF4Q7Z6M4 381 aaKnown RBP20.93■□□□□ 0.94
SNED1-204ENST00000401884 PANK2Q9BZ23 570 aa20.93■□□□□ 0.94
SNED1-204ENST00000401884 ABCC1P33527 1531 aa20.92■□□□□ 0.94
SNED1-204ENST00000401884 CFAP65Q6ZU64 1925 aaKnown RBP20.92■□□□□ 0.94
SNED1-204ENST00000401884 ATP8B2P98198 1209 aa20.92■□□□□ 0.94
SNED1-204ENST00000401884 SMC2O95347 1197 aa20.92■□□□□ 0.94
SNED1-204ENST00000401884 MAP3K11Q16584 847 aa20.91■□□□□ 0.94
SNED1-204ENST00000401884 ESYT1Q9BSJ8 1104 aa20.91■□□□□ 0.94
SNED1-204ENST00000401884 CTNNA3Q9UI47 895 aa20.91■□□□□ 0.94
SNED1-204ENST00000401884 TRMT2AQ8IZ69 625 aaKnown RBP20.91■□□□□ 0.94
SNED1-204ENST00000401884 CLSTN1O94985 981 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 XBP1P17861 261 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 IL13P35225 146 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 EVI5LQ96CN4 794 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 CCDC183Q5T5S1 534 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 RBM27Q9P2N5 1060 aaKnown RBP20.9■□□□□ 0.94
SNED1-204ENST00000401884 ZNF521Q96K83 1311 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 JMYQ8N9B5 988 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
SNED1-204ENST00000401884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNED1-204ENST00000401884 SBNO2Q9Y2G9 1366 aa20.89■□□□□ 0.94
SNED1-204ENST00000401884 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.94
SNED1-204ENST00000401884 EYA1Q99502 592 aa20.89■□□□□ 0.94
SNED1-204ENST00000401884 A0A087WZG4 1122 aa20.89■□□□□ 0.93
SNED1-204ENST00000401884 IPO7O95373 1038 aaKnown RBP20.89■□□□□ 0.93
SNED1-204ENST00000401884 CAMK4Q16566 473 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms