RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-203ENST00000400556 EYA1Q99502 592 aa12.91□□□□□ -0.34
PPP4R1-203ENST00000400556 PTPRCP08575 1304 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 ANXA1P04083 346 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 MX1P20591 662 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 PTMSP20962 102 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 FLIIQ13045 1269 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 RIMS1Q86UR5 1692 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 DDX54Q8TDD1 881 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 ESYT1Q9BSJ8 1104 aa12.9□□□□□ -0.34
PPP4R1-203ENST00000400556 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-203ENST00000400556 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-203ENST00000400556 PPP1R9BQ96SB3 815 aa12.89□□□□□ -0.35
PPP4R1-203ENST00000400556 CPA1P15085 419 aa12.89□□□□□ -0.35
PPP4R1-203ENST00000400556 CLEC17AQ6ZS10 378 aa12.89□□□□□ -0.35
PPP4R1-203ENST00000400556 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 LTKP29376 864 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 ZNF445P59923 1031 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 CRB1P82279 1406 aa12.88□□□□□ -0.35
PPP4R1-203ENST00000400556 CHMLP26374 656 aa12.87□□□□□ -0.35
PPP4R1-203ENST00000400556 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-203ENST00000400556 NLRP6P59044 892 aa12.87□□□□□ -0.35
PPP4R1-203ENST00000400556 SURF6O75683 361 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-203ENST00000400556 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
PPP4R1-203ENST00000400556 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
PPP4R1-203ENST00000400556 FAM13BQ9NYF5 915 aa12.85□□□□□ -0.35
PPP4R1-203ENST00000400556 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
PPP4R1-203ENST00000400556 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
PPP4R1-203ENST00000400556 ZNF830Q96NB3 372 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-203ENST00000400556 PTMAP06454 111 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 UBTFL1P0CB47 393 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 MCCP23508 829 aa12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 LRSAM1Q6UWE0 723 aa12.84□□□□□ -0.35
PPP4R1-203ENST00000400556 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.35
PPP4R1-203ENST00000400556 PPP1R42Q7Z4L9 355 aa12.83□□□□□ -0.35
PPP4R1-203ENST00000400556 NRXN3Q9Y4C0 1643 aa12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 CWC27Q6UX04 472 aaKnown RBP12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 SETD1BQ9UPS6 1966 aaKnown RBP12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 BRD1O95696 1058 aa12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 USP6P35125 1406 aa12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 PEAK1Q9H792 1746 aa12.83□□□□□ -0.36
PPP4R1-203ENST00000400556 SRGAP3O43295 1099 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 GNAI3P08754 354 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 JARID2Q92833 1246 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 OSBPL3Q9H4L5 887 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 CEP170BQ9Y4F5 1589 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 SALL3Q9BXA9 1300 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 KCNQ3O43525 872 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 OVOS2A0A0J9YW53 1432 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 OVOS2Q6IE36 1432 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
PPP4R1-203ENST00000400556 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 OFD1O75665 1012 aa12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 OS9Q13438 667 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 C17orf53Q8N3J3 647 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 FIBPO43427 364 aa12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 C3P01024 1663 aa12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 RRP9O43818 475 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-203ENST00000400556 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 TCHHQ07283 1943 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 LGR6Q9HBX8 967 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 USP25Q9UHP3 1055 aa12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 NOL7Q9UMY1 257 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-203ENST00000400556 PDLIM2Q96JY6 352 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 FLT4P35916 1363 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 LARGE1O95461 756 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 TSC1Q92574 1164 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 TSPY26PQ9H489 355 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 TNRQ92752 1358 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
PPP4R1-203ENST00000400556 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms