RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 LRRC59Q96AG4 307 aaKnown RBP19.64■□□□□ 0.73
CDC42-203ENST00000400259 COL18A1P39060 1754 aa19.64■□□□□ 0.73
CDC42-203ENST00000400259 F6X3S4 739 aa19.63■□□□□ 0.73
CDC42-203ENST00000400259 MFAP1P55081 439 aaKnown RBP19.63■□□□□ 0.73
CDC42-203ENST00000400259 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
CDC42-203ENST00000400259 PXDNQ92626 1479 aa19.63■□□□□ 0.73
CDC42-203ENST00000400259 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
CDC42-203ENST00000400259 ABCC6O95255 1503 aa19.62■□□□□ 0.73
CDC42-203ENST00000400259 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
CDC42-203ENST00000400259 ATF3P18847 181 aa19.61■□□□□ 0.73
CDC42-203ENST00000400259 ZNF530Q6P9A1 599 aaPredicted RBP19.61■□□□□ 0.73
CDC42-203ENST00000400259 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
CDC42-203ENST00000400259 HMMRO75330 724 aa19.6■□□□□ 0.73
CDC42-203ENST00000400259 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
CDC42-203ENST00000400259 EIF4A1P60842 406 aaKnown RBP19.6■□□□□ 0.73
CDC42-203ENST00000400259 SLC4A10Q6U841 1118 aa19.6■□□□□ 0.73
CDC42-203ENST00000400259 PLEKHM2Q8IWE5 1019 aa19.6■□□□□ 0.73
CDC42-203ENST00000400259 LGR6Q9HBX8 967 aa19.6■□□□□ 0.73
CDC42-203ENST00000400259 FKBP5Q13451 457 aaPredicted RBP19.6■□□□□ 0.73
CDC42-203ENST00000400259 LMOD2Q6P5Q4 547 aa19.59■□□□□ 0.73
CDC42-203ENST00000400259 HDGFL1Q5TGJ6 251 aa19.59■□□□□ 0.73
CDC42-203ENST00000400259 TBC1D2Q9BYX2 928 aa19.59■□□□□ 0.73
CDC42-203ENST00000400259 AXIN2Q9Y2T1 843 aa19.59■□□□□ 0.73
CDC42-203ENST00000400259 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
CDC42-203ENST00000400259 GNAI2P04899 355 aa19.58■□□□□ 0.73
CDC42-203ENST00000400259 GNAI3P08754 354 aa19.58■□□□□ 0.73
CDC42-203ENST00000400259 ERBB3P21860 1342 aa19.58■□□□□ 0.73
CDC42-203ENST00000400259 TUBGCP6Q96RT7 1819 aa19.57■□□□□ 0.72
CDC42-203ENST00000400259 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
CDC42-203ENST00000400259 NFKBIBQ15653 356 aa19.57■□□□□ 0.72
CDC42-203ENST00000400259 RNMTO43148 476 aaKnown RBP19.56■□□□□ 0.72
CDC42-203ENST00000400259 TEFQ10587 303 aa19.56■□□□□ 0.72
CDC42-203ENST00000400259 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
CDC42-203ENST00000400259 GSPT1P15170 499 aaKnown RBP19.56■□□□□ 0.72
CDC42-203ENST00000400259 TTC22Q5TAA0 569 aa19.56■□□□□ 0.72
CDC42-203ENST00000400259 TBC1D9Q6ZT07 1266 aa19.56■□□□□ 0.72
CDC42-203ENST00000400259 CADPS2Q86UW7 1296 aa19.56■□□□□ 0.72
CDC42-203ENST00000400259 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
CDC42-203ENST00000400259 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
CDC42-203ENST00000400259 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
CDC42-203ENST00000400259 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
CDC42-203ENST00000400259 CDC45O75419 566 aa19.55■□□□□ 0.72
CDC42-203ENST00000400259 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
CDC42-203ENST00000400259 BTBD11A6QL63 1104 aa19.54■□□□□ 0.72
CDC42-203ENST00000400259 MPRIPQ6WCQ1 1025 aa19.54■□□□□ 0.72
CDC42-203ENST00000400259 ANTXR1Q9H6X2 564 aa19.54■□□□□ 0.72
CDC42-203ENST00000400259 PKD1L3Q7Z443 1732 aa19.52■□□□□ 0.72
CDC42-203ENST00000400259 STRCQ7RTU9 1775 aa19.52■□□□□ 0.72
CDC42-203ENST00000400259 KCNQ3O43525 872 aa19.51■□□□□ 0.71
CDC42-203ENST00000400259 ATP8B2P98198 1209 aa19.51■□□□□ 0.71
CDC42-203ENST00000400259 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
CDC42-203ENST00000400259 PHAXQ9H814 394 aaKnown RBP19.51■□□□□ 0.71
CDC42-203ENST00000400259 OSBPL3Q9H4L5 887 aa19.51■□□□□ 0.71
CDC42-203ENST00000400259 ZC3H6P61129 1189 aaKnown RBP19.5■□□□□ 0.71
CDC42-203ENST00000400259 USP44Q9H0E7 712 aa19.5■□□□□ 0.71
CDC42-203ENST00000400259 SNX21Q969T3 373 aa19.5■□□□□ 0.71
CDC42-203ENST00000400259 CHPF2Q9P2E5 772 aa19.5■□□□□ 0.71
CDC42-203ENST00000400259 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
CDC42-203ENST00000400259 OTUD7AQ8TE49 926 aaPredicted RBP19.49■□□□□ 0.71
CDC42-203ENST00000400259 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
CDC42-203ENST00000400259 CPDO75976 1380 aa19.48■□□□□ 0.71
CDC42-203ENST00000400259 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
CDC42-203ENST00000400259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.711e-6■□□□□ 8.4
CDC42-203ENST00000400259 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
CDC42-203ENST00000400259 IBTKQ9P2D0 1353 aaPredicted RBP19.48■□□□□ 0.71
CDC42-203ENST00000400259 FRAT2O75474 233 aaPredicted RBP19.48■□□□□ 0.71
CDC42-203ENST00000400259 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
CDC42-203ENST00000400259 SRCIN1Q9C0H9 1055 aa19.48■□□□□ 0.71
CDC42-203ENST00000400259 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
CDC42-203ENST00000400259 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
CDC42-203ENST00000400259 KIF2CQ99661 725 aa19.47■□□□□ 0.71
CDC42-203ENST00000400259 DBF4Q9UBU7 674 aaPredicted RBP19.47■□□□□ 0.71
CDC42-203ENST00000400259 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
CDC42-203ENST00000400259 SALL3Q9BXA9 1300 aa19.47■□□□□ 0.71
CDC42-203ENST00000400259 C5P01031 1676 aa19.47■□□□□ 0.71
CDC42-203ENST00000400259 MRC1P22897 1456 aa19.47■□□□□ 0.71
CDC42-203ENST00000400259 MEGF6O75095 1541 aa19.46■□□□□ 0.71
CDC42-203ENST00000400259 PNMA6EA0A0J9YXQ4 647 aa19.46■□□□□ 0.71
CDC42-203ENST00000400259 PARP4Q9UKK3 1724 aaKnown RBP19.46■□□□□ 0.71
CDC42-203ENST00000400259 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
CDC42-203ENST00000400259 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
CDC42-203ENST00000400259 ADCY9O60503 1353 aa19.46■□□□□ 0.71
CDC42-203ENST00000400259 KDM6AO15550 1401 aaPredicted RBP19.46■□□□□ 0.71
CDC42-203ENST00000400259 HSCBQ8IWL3 235 aa19.45■□□□□ 0.7
CDC42-203ENST00000400259 SLKQ9H2G2 1235 aaPredicted RBP19.45■□□□□ 0.7
CDC42-203ENST00000400259 SDSP20132 328 aa19.45■□□□□ 0.7
CDC42-203ENST00000400259 HSPA2P54652 639 aa19.45■□□□□ 0.7
CDC42-203ENST00000400259 BEND3Q5T5X7 828 aa19.45■□□□□ 0.7
CDC42-203ENST00000400259 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
CDC42-203ENST00000400259 LRRCC1Q9C099 1032 aa19.45■□□□□ 0.7
CDC42-203ENST00000400259 APBB1O00213 710 aa19.44■□□□□ 0.7
CDC42-203ENST00000400259 PDE1AP54750 535 aa19.44■□□□□ 0.7
CDC42-203ENST00000400259 TATP17735 454 aaPredicted RBP19.44■□□□□ 0.7
CDC42-203ENST00000400259 NLRP2Q9NX02 1062 aa19.44■□□□□ 0.7
CDC42-203ENST00000400259 EXOC6BQ9Y2D4 811 aa19.44■□□□□ 0.7
CDC42-203ENST00000400259 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
CDC42-203ENST00000400259 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
CDC42-203ENST00000400259 SPG7Q9UQ90 795 aa19.43■□□□□ 0.7
CDC42-203ENST00000400259 POLA2Q14181 598 aa19.42■□□□□ 0.7
CDC42-203ENST00000400259 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms