RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 KCNA4P22459 653 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 GIMAP6Q6P9H5 292 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■■■■■ 42.4
DDX3X-201ENST00000399959 ERBINQ96RT1 1412 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 ZNF644Q9H582 1327 aaPredicted RBP15.9■□□□□ 0.14
DDX3X-201ENST00000399959 STX6O43752 255 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 IFFO1Q0D2I5 559 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 CCDC113Q9H0I3 377 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 TBC1D2BQ9UPU7 963 aa15.9■□□□□ 0.14
DDX3X-201ENST00000399959 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
DDX3X-201ENST00000399959 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
DDX3X-201ENST00000399959 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX3X-201ENST00000399959 V9GYY5 206 aaPredicted RBP15.89■□□□□ 0.13
DDX3X-201ENST00000399959 VGLL3A8MV65 326 aa15.89■□□□□ 0.13
DDX3X-201ENST00000399959 HSPA4P34932 840 aa15.89■□□□□ 0.13
DDX3X-201ENST00000399959 PAFAH1B1P43034 410 aa15.89■□□□□ 0.13
DDX3X-201ENST00000399959 SMC1AQ14683 1233 aaKnown RBP15.89■□□□□ 0.13
DDX3X-201ENST00000399959 ZSWIM4Q9H7M6 989 aa15.89■□□□□ 0.13
DDX3X-201ENST00000399959 A0A1B0GUL7 405 aa15.89■□□□□ 0.13
DDX3X-201ENST00000399959 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX3X-201ENST00000399959 HFM1A2PYH4 1435 aa15.89■□□□□ 0.13
DDX3X-201ENST00000399959 BCCIPQ9P287 314 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX3X-201ENST00000399959 MX1P20591 662 aa15.88■□□□□ 0.13
DDX3X-201ENST00000399959 GABPB1Q06547 395 aaPredicted RBP15.88■□□□□ 0.13
DDX3X-201ENST00000399959 SRRTQ9BXP5 876 aaKnown RBP15.88■□□□□ 0.13
DDX3X-201ENST00000399959 SNX21Q969T3 373 aa15.88■□□□□ 0.13
DDX3X-201ENST00000399959 MCM6Q14566 821 aa15.88■□□□□ 0.13
DDX3X-201ENST00000399959 IL1RAPL2Q9NP60 686 aa15.88■□□□□ 0.13
DDX3X-201ENST00000399959 TUBB4AP04350 444 aa15.87■□□□□ 0.13
DDX3X-201ENST00000399959 DUSP27Q5VZP5 1158 aa15.87■□□□□ 0.13
DDX3X-201ENST00000399959 RAB3GAP1Q15042 981 aa15.87■□□□□ 0.13
DDX3X-201ENST00000399959 PRPF40BQ6NWY9 871 aaKnown RBP15.87■□□□□ 0.13
DDX3X-201ENST00000399959 GIGYF2Q6Y7W6 1299 aaKnown RBP15.87■□□□□ 0.13
DDX3X-201ENST00000399959 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
DDX3X-201ENST00000399959 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
DDX3X-201ENST00000399959 DNAI1Q9UI46 699 aa15.87■□□□□ 0.13
DDX3X-201ENST00000399959 FYB1O15117 783 aa15.87■□□□□ 0.13
DDX3X-201ENST00000399959 LIG1P18858 919 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 SPECC1LQ69YQ0 1117 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
DDX3X-201ENST00000399959 AACSQ86V21 672 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 CCDC69A6NI79 296 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 FSIP1Q8NA03 581 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
DDX3X-201ENST00000399959 GJB2P29033 226 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 CPLX3Q8WVH0 158 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 ARAP1Q96P48 1450 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
DDX3X-201ENST00000399959 YEATS4O95619 227 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 MYZAPP0CAP1 466 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
DDX3X-201ENST00000399959 KRBA2Q6ZNG9 492 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
DDX3X-201ENST00000399959 EBAG9O00559 213 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
DDX3X-201ENST00000399959 GBP6Q6ZN66 633 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 EXOC6BQ9Y2D4 811 aa15.85■□□□□ 0.13
DDX3X-201ENST00000399959 MYRIPQ8NFW9 859 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 SRGAP3O43295 1099 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 HSF2BPO75031 334 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 NUTM1Q86Y26 1132 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 NAA15Q9BXJ9 866 aaKnown RBP15.84■□□□□ 0.13
DDX3X-201ENST00000399959 VPS18Q9P253 973 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 CEP131Q9UPN4 1083 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 KLHL10Q6JEL2 608 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 NBPF11Q86T75 865 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 SLC3A2P08195 630 aaKnown RBP15.84■□□□□ 0.13
DDX3X-201ENST00000399959 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 MAATS1Q7Z4T9 603 aa15.84■□□□□ 0.13
DDX3X-201ENST00000399959 MTMR7Q9Y216 660 aa15.83■□□□□ 0.13
DDX3X-201ENST00000399959 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 CEP57Q86XR8 500 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 TFIP11Q9UBB9 837 aaKnown RBP15.83■□□□□ 0.12
DDX3X-201ENST00000399959 U2AF2P26368 475 aaKnown RBP eCLIP15.83■□□□□ 0.123e-7■■□□□ 12.7
DDX3X-201ENST00000399959 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 WASF1Q92558 559 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 SIL1Q9H173 461 aa15.83■□□□□ 0.12
DDX3X-201ENST00000399959 CTAGE15A4D2H0 777 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 ATP2C2O75185 946 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 CTAGE8P0CG41 777 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 CTAGE6Q86UF2 777 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 CTAGE4Q8IX94 777 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 CTNNA3Q9UI47 895 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 GTF3C6Q969F1 213 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.82■□□□□ 0.127e-7■□□□□ 11.2
DDX3X-201ENST00000399959 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
DDX3X-201ENST00000399959 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.12
DDX3X-201ENST00000399959 CCDC178Q5BJE1 867 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
DDX3X-201ENST00000399959 TMX3Q96JJ7 454 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms