RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 STK3Q13188 491 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 CCDC34Q96HJ3 373 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 F6X3S4 739 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
ITSN1-210ENST00000399353 TMCO3Q6UWJ1 677 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 CCDC191Q8NCU4 936 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 UBXN4Q92575 508 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
ITSN1-210ENST00000399353 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
ITSN1-210ENST00000399353 ARGLU1Q9NWB6 273 aaPredicted RBP17.63■□□□□ 0.41
ITSN1-210ENST00000399353 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 RAPGEF6Q8TEU7 1601 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 LMAN1P49257 510 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 MRPL50Q8N5N7 158 aaKnown RBP17.62■□□□□ 0.41
ITSN1-210ENST00000399353 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 USP16Q9Y5T5 823 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 VAMP4O75379 141 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 ARHGAP29Q52LW3 1261 aa17.62■□□□□ 0.41
ITSN1-210ENST00000399353 ZSCAN25Q6NSZ9 544 aa17.61■□□□□ 0.41
ITSN1-210ENST00000399353 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
ITSN1-210ENST00000399353 CACTINQ8WUQ7 758 aaKnown RBP17.61■□□□□ 0.41
ITSN1-210ENST00000399353 GJB2P29033 226 aa17.61■□□□□ 0.41
ITSN1-210ENST00000399353 GOLGA6L1Q8N7Z2 621 aa17.61■□□□□ 0.41
ITSN1-210ENST00000399353 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
ITSN1-210ENST00000399353 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
ITSN1-210ENST00000399353 CASTP20810 708 aaKnown RBP17.6■□□□□ 0.41
ITSN1-210ENST00000399353 PDE1AP54750 535 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 RASSF4Q9H2L5 321 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 SLU7O95391 586 aaKnown RBP17.6■□□□□ 0.41
ITSN1-210ENST00000399353 KRT85P78386 507 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 CWC27Q6UX04 472 aaKnown RBP17.6■□□□□ 0.41
ITSN1-210ENST00000399353 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
ITSN1-210ENST00000399353 ESYT1Q9BSJ8 1104 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 SMC2O95347 1197 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
ITSN1-210ENST00000399353 A0A087WWV3 80 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 F13A1P00488 732 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
ITSN1-210ENST00000399353 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 CBX8Q9HC52 389 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 ZCCHC17Q9NP64 241 aaKnown RBP17.59■□□□□ 0.41
ITSN1-210ENST00000399353 ATP10BO94823 1461 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 PPFIA3O75145 1194 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 URI1O94763 535 aaPredicted RBP17.59■□□□□ 0.41
ITSN1-210ENST00000399353 CAPN2P17655 700 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
ITSN1-210ENST00000399353 SYT10Q6XYQ8 523 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 TSPYL1Q9H0U9 437 aa17.59■□□□□ 0.41
ITSN1-210ENST00000399353 TPM4P67936 248 aa17.58■□□□□ 0.41
ITSN1-210ENST00000399353 SPATA32Q96LK8 384 aa17.58■□□□□ 0.41
ITSN1-210ENST00000399353 MBIPQ9NS73 344 aa17.58■□□□□ 0.41
ITSN1-210ENST00000399353 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
ITSN1-210ENST00000399353 USP27XA6NNY8 438 aa17.58■□□□□ 0.4
ITSN1-210ENST00000399353 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
ITSN1-210ENST00000399353 ABCC2Q92887 1545 aa17.58■□□□□ 0.4
ITSN1-210ENST00000399353 CTIFO43310 598 aaKnown RBP17.58■□□□□ 0.4
ITSN1-210ENST00000399353 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
ITSN1-210ENST00000399353 RAD51AP2Q09MP3 1159 aa17.58■□□□□ 0.4
ITSN1-210ENST00000399353 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.4
ITSN1-210ENST00000399353 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
ITSN1-210ENST00000399353 TRIM66O15016 1216 aa17.57■□□□□ 0.4
ITSN1-210ENST00000399353 LIG1P18858 919 aa17.57■□□□□ 0.4
ITSN1-210ENST00000399353 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
ITSN1-210ENST00000399353 LRRIQ1Q96JM4 1722 aa17.57■□□□□ 0.4
ITSN1-210ENST00000399353 GYS2P54840 703 aa17.57■□□□□ 0.4
ITSN1-210ENST00000399353 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
ITSN1-210ENST00000399353 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
ITSN1-210ENST00000399353 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
ITSN1-210ENST00000399353 CWC15Q9P013 229 aaKnown RBP17.57■□□□□ 0.4
ITSN1-210ENST00000399353 H3BQV1 296 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 IFFO2Q5TF58 517 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 DRC1Q96MC2 740 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 ANKRD65E5RJM6 399 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 AK2P54819 239 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 SNW1Q13573 536 aaKnown RBP17.56■□□□□ 0.4
ITSN1-210ENST00000399353 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
ITSN1-210ENST00000399353 COG3Q96JB2 828 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
ITSN1-210ENST00000399353 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
ITSN1-210ENST00000399353 ZNF75DP51815 510 aa17.55■□□□□ 0.4
ITSN1-210ENST00000399353 ANKRD44Q8N8A2 993 aa17.55■□□□□ 0.4
ITSN1-210ENST00000399353 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
ITSN1-210ENST00000399353 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
ITSN1-210ENST00000399353 CEP85Q6P2H3 762 aa17.54■□□□□ 0.4
ITSN1-210ENST00000399353 LRRCC1Q9C099 1032 aa17.54■□□□□ 0.4
ITSN1-210ENST00000399353 LIMCH1Q9UPQ0 1083 aa17.54■□□□□ 0.4
ITSN1-210ENST00000399353 DISP1Q96F81 1524 aa17.54■□□□□ 0.4
ITSN1-210ENST00000399353 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
ITSN1-210ENST00000399353 ERO1AQ96HE7 468 aa17.54■□□□□ 0.4
ITSN1-210ENST00000399353 FEZ2Q9UHY8 353 aaPredicted RBP17.54■□□□□ 0.4
ITSN1-210ENST00000399353 SEC31AO94979 1220 aaKnown RBP17.53■□□□□ 0.4
ITSN1-210ENST00000399353 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms