RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 KIF20AO95235 890 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 DDX11Q96FC9 970 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 UVSSAQ2YD98 709 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 TTLL5Q6EMB2 1281 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 FMNL2Q96PY5 1086 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 RPRD2Q5VT52 1461 aaKnown RBP9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 GOLGA6L9A6NEM1 432 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 EZRP15311 586 aaKnown RBP9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 TDO2P48775 406 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 STARD3NLO95772 234 aa9.77□□□□□ -0.84
SPTLC3-201ENST00000399002 TNIP1Q15025 636 aa9.77□□□□□ -0.84
SPTLC3-201ENST00000399002 FAM107BQ9H098 131 aa9.77□□□□□ -0.84
SPTLC3-201ENST00000399002 EHMT1Q9H9B1 1298 aa9.77□□□□□ -0.84
SPTLC3-201ENST00000399002 GSDMDP57764 484 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 KRI1Q8N9T8 703 aaKnown RBP9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 PEG3Q9GZU2 1588 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 CETN2P41208 172 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 STK3Q13188 491 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 NUTM2GQ5VZR2 741 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 FKBP15Q5T1M5 1219 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 KIAA1328Q86T90 577 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 SLC26A8Q96RN1 970 aa9.77□□□□□ -0.85
SPTLC3-201ENST00000399002 CASQ1P31415 396 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 PDCL3Q9H2J4 239 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 DDX19AQ9NUU7 478 aaKnown RBP9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 TMEM57Q8N5G2 664 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 ADGRL1O94910 1474 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 AIDAQ96BJ3 306 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 RNF41Q9H4P4 317 aaPredicted RBP9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 TOM1L2Q6ZVM7 507 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 FILIP1Q7Z7B0 1213 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 ESPNB1AK53 854 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 CWC27Q6UX04 472 aaKnown RBP9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 NUP133Q8WUM0 1156 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 RAB34Q9BZG1 259 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 SEC63Q9UGP8 760 aaKnown RBP9.76□□□□□ -0.85
SPTLC3-201ENST00000399002 SPA17Q15506 151 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 CCDC91Q7Z6B0 441 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 GRIN2AQ12879 1464 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 HMG20BQ9P0W2 317 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 DUOX2Q9NRD8 1548 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 KIF5CO60282 957 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 TTF1Q15361 905 aaPredicted RBP9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 RARSP54136 660 aaKnown RBP9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 VPS36Q86VN1 386 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 NUDT16Q96DE0 195 aaKnown RBP9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 TAF7Q15545 349 aaPredicted RBP9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
SPTLC3-201ENST00000399002 TMCO3Q6UWJ1 677 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 EVI5LQ96CN4 794 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 SHTN1A0MZ66 631 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 EIF5P55010 431 aaKnown RBP9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 ARHGAP29Q52LW3 1261 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 MICALCLQ6ZW33 695 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 NEFHP12036 1026 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 DUSP27Q5VZP5 1158 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 SIL1Q9H173 461 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 CCDC61Q9Y6R9 512 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 ASXL1Q8IXJ9 1541 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 A0A087WZG4 1122 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 TUBB4AP04350 444 aa9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 SFPQP23246 707 aaKnown RBP eCLIP9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 FKBP4Q02790 459 aaKnown RBP eCLIP9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 ENOX2Q16206 610 aaKnown RBP9.74□□□□□ -0.85
SPTLC3-201ENST00000399002 TMEM266Q2M3C6 531 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 CAVIN4Q5BKX8 364 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 CCDC12Q8WUD4 166 aaPredicted RBP9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 UBXN4Q92575 508 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 RAI14Q9P0K7 980 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 RAPGEF6Q8TEU7 1601 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 SLC5A1P13866 664 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 PTPN14Q15678 1187 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 STX1AQ16623 288 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 PIK3R4Q99570 1358 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 LIMCH1Q9UPQ0 1083 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 MAP4K4O95819 1239 aaPredicted RBP9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 IFIT1P09914 478 aaKnown RBP9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 SSRP1Q08945 709 aaKnown RBP9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 CCDC178Q5BJE1 867 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 CCDC150Q8NCX0 1101 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 TEX13AQ9BXU3 409 aaPredicted RBP9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 BRPF3Q9ULD4 1205 aa9.73□□□□□ -0.85
SPTLC3-201ENST00000399002 ZNF76P36508 570 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms