RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 BARGINQ6ZT62 677 aa14.71□□□□□ -0.05
FGFR1-208ENST00000397108 TCP11L2Q8N4U5 519 aa14.71□□□□□ -0.05
FGFR1-208ENST00000397108 R3HCC1Q9Y3T6 440 aaKnown RBP14.71□□□□□ -0.05
FGFR1-208ENST00000397108 PARP4Q9UKK3 1724 aaKnown RBP14.71□□□□□ -0.05
FGFR1-208ENST00000397108 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.06
FGFR1-208ENST00000397108 SEPT12Q8IYM1 358 aa14.71□□□□□ -0.06
FGFR1-208ENST00000397108 TRMT2AQ8IZ69 625 aaKnown RBP14.71□□□□□ -0.06
FGFR1-208ENST00000397108 PRDM10Q9NQV6 1147 aa14.71□□□□□ -0.06
FGFR1-208ENST00000397108 FLT4P35916 1363 aa14.71□□□□□ -0.06
FGFR1-208ENST00000397108 CSB-PGBD3P0DP91 1061 aa14.7□□□□□ -0.06
FGFR1-208ENST00000397108 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
FGFR1-208ENST00000397108 INSRP06213 1382 aa14.7□□□□□ -0.06
FGFR1-208ENST00000397108 NEUROD2Q15784 382 aa14.7□□□□□ -0.06
FGFR1-208ENST00000397108 HSCBQ8IWL3 235 aa14.7□□□□□ -0.06
FGFR1-208ENST00000397108 TNPO1Q92973 898 aaKnown RBP14.7□□□□□ -0.06
FGFR1-208ENST00000397108 CARD10Q9BWT7 1032 aa14.7□□□□□ -0.06
FGFR1-208ENST00000397108 RGPD2P0DJD1 1756 aa14.69□□□□□ -0.06
FGFR1-208ENST00000397108 RLBP1P12271 317 aa14.69□□□□□ -0.06
FGFR1-208ENST00000397108 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
FGFR1-208ENST00000397108 PDE3AQ14432 1141 aa14.68□□□□□ -0.06
FGFR1-208ENST00000397108 EMILIN1Q9Y6C2 1016 aa14.68□□□□□ -0.06
FGFR1-208ENST00000397108 POLKQ9UBT6 870 aa14.68□□□□□ -0.06
FGFR1-208ENST00000397108 ZHX1Q9UKY1 873 aaPredicted RBP14.68□□□□□ -0.06
FGFR1-208ENST00000397108 LRRC37A3O60309 1634 aa14.68□□□□□ -0.06
FGFR1-208ENST00000397108 E9PSI1 815 aa14.67□□□□□ -0.06
FGFR1-208ENST00000397108 MSNP26038 577 aaKnown RBP14.67□□□□□ -0.06
FGFR1-208ENST00000397108 TNNT2P45379 298 aaPredicted RBP14.67□□□□□ -0.06
FGFR1-208ENST00000397108 A0A0G2JS52 829 aa14.67□□□□□ -0.06
FGFR1-208ENST00000397108 OFD1O75665 1012 aa14.67□□□□□ -0.06
FGFR1-208ENST00000397108 ZSCAN30Q86W11 494 aa14.67□□□□□ -0.06
FGFR1-208ENST00000397108 DISP2A7MBM2 1401 aa14.67□□□□□ -0.06
FGFR1-208ENST00000397108 NASPP49321 788 aaPredicted RBP14.66□□□□□ -0.06
FGFR1-208ENST00000397108 AAMPQ13685 434 aa14.66□□□□□ -0.06
FGFR1-208ENST00000397108 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
FGFR1-208ENST00000397108 NLRP2Q9NX02 1062 aa14.66□□□□□ -0.06
FGFR1-208ENST00000397108 LTV1Q96GA3 475 aaPredicted RBP14.65□□□□□ -0.06
FGFR1-208ENST00000397108 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
FGFR1-208ENST00000397108 KRT27Q7Z3Y8 459 aa14.64□□□□□ -0.07
FGFR1-208ENST00000397108 RRP7AQ9Y3A4 280 aaKnown RBP14.64□□□□□ -0.07
FGFR1-208ENST00000397108 EP400Q96L91 3159 aa14.64□□□□□ -0.07
FGFR1-208ENST00000397108 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
FGFR1-208ENST00000397108 CCDC173Q0VFZ6 552 aa14.63□□□□□ -0.07
FGFR1-208ENST00000397108 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
FGFR1-208ENST00000397108 ANP32BQ92688 251 aaKnown RBP14.63□□□□□ -0.07
FGFR1-208ENST00000397108 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
FGFR1-208ENST00000397108 UQCRHLA0A096LP55 91 aa14.62□□□□□ -0.07
FGFR1-208ENST00000397108 UQCRHP07919 91 aa14.62□□□□□ -0.07
FGFR1-208ENST00000397108 HSP90AB1P08238 724 aaKnown RBP14.62□□□□□ -0.07
FGFR1-208ENST00000397108 GBP4Q96PP9 640 aa14.62□□□□□ -0.07
FGFR1-208ENST00000397108 RWDD1Q9H446 243 aaPredicted RBP14.62□□□□□ -0.07
FGFR1-208ENST00000397108 NCAPD2Q15021 1401 aa14.61□□□□□ -0.07
FGFR1-208ENST00000397108 TNS2Q63HR2 1409 aa14.61□□□□□ -0.07
FGFR1-208ENST00000397108 NBPF6Q5VWK0 638 aa14.6□□□□□ -0.07
FGFR1-208ENST00000397108 NBPF4Q96M43 638 aa14.6□□□□□ -0.07
FGFR1-208ENST00000397108 IL2RBP14784 551 aa14.6□□□□□ -0.07
FGFR1-208ENST00000397108 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
FGFR1-208ENST00000397108 DDB1Q16531 1140 aa14.59□□□□□ -0.07
FGFR1-208ENST00000397108 UPF1Q92900 1129 aaKnown RBP eCLIP14.59□□□□□ -0.073e-8■■■■□ 19.9
FGFR1-208ENST00000397108 PPP1R9BQ96SB3 815 aa14.59□□□□□ -0.07
FGFR1-208ENST00000397108 RARSP54136 660 aaKnown RBP14.59□□□□□ -0.07
FGFR1-208ENST00000397108 WWC1Q8IX03 1113 aa14.59□□□□□ -0.07
FGFR1-208ENST00000397108 RGPD1P0DJD0 1748 aa14.58□□□□□ -0.07
FGFR1-208ENST00000397108 DDIT3P35638 169 aa14.58□□□□□ -0.08
FGFR1-208ENST00000397108 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
FGFR1-208ENST00000397108 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
FGFR1-208ENST00000397108 SHANK3Q9BYB0 1731 aa14.58□□□□□ -0.08
FGFR1-208ENST00000397108 SSFA2P28290 1259 aa14.58□□□□□ -0.08
FGFR1-208ENST00000397108 MEGF6O75095 1541 aa14.58□□□□□ -0.08
FGFR1-208ENST00000397108 MTHFSP49914 203 aa14.57□□□□□ -0.08
FGFR1-208ENST00000397108 OVOS2A0A0G2JMS6 1433 aa14.57□□□□□ -0.08
FGFR1-208ENST00000397108 CD2BP2O95400 341 aaKnown RBP14.57□□□□□ -0.08
FGFR1-208ENST00000397108 RAB3GAP1Q15042 981 aa14.57□□□□□ -0.08
FGFR1-208ENST00000397108 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
FGFR1-208ENST00000397108 SBF2Q86WG5 1849 aa14.57□□□□□ -0.08
FGFR1-208ENST00000397108 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 PKD1L3Q7Z443 1732 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 EXOC5O00471 708 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 EYA1Q99502 592 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 TNS1Q9HBL0 1735 aaKnown RBP14.56□□□□□ -0.08
FGFR1-208ENST00000397108 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 FAM196AQ6ZSG2 479 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 JARID2Q92833 1246 aaPredicted RBP14.56□□□□□ -0.08
FGFR1-208ENST00000397108 MAP7D2Q96T17 732 aa14.56□□□□□ -0.08
FGFR1-208ENST00000397108 COL3A1P02461 1466 aaPredicted RBP14.55□□□□□ -0.08
FGFR1-208ENST00000397108 BCL9O00512 1426 aa14.55□□□□□ -0.08
FGFR1-208ENST00000397108 FGD1P98174 961 aa14.55□□□□□ -0.08
FGFR1-208ENST00000397108 CCDC125Q86Z20 511 aa14.55□□□□□ -0.08
FGFR1-208ENST00000397108 IGSF1Q8N6C5 1336 aa14.54□□□□□ -0.08
FGFR1-208ENST00000397108 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
FGFR1-208ENST00000397108 SMC5Q8IY18 1101 aa14.54□□□□□ -0.08
FGFR1-208ENST00000397108 MARCH10Q8NA82 808 aaPredicted RBP14.54□□□□□ -0.08
FGFR1-208ENST00000397108 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
FGFR1-208ENST00000397108 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
FGFR1-208ENST00000397108 IL13P35225 146 aa14.53□□□□□ -0.08
FGFR1-208ENST00000397108 SMAP1Q8IYB5 467 aaPredicted RBP14.53□□□□□ -0.08
FGFR1-208ENST00000397108 PLEKHG2Q9H7P9 1386 aa14.53□□□□□ -0.08
FGFR1-208ENST00000397108 CAVIN1Q6NZI2 390 aaKnown RBP14.53□□□□□ -0.08
FGFR1-208ENST00000397108 TATP17735 454 aaPredicted RBP14.52□□□□□ -0.09
FGFR1-208ENST00000397108 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.09
FGFR1-208ENST00000397108 TSC1Q92574 1164 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms