RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 U2SURPO15042 1029 aaKnown RBP14.11□□□□□ -0.15
NUP98-205ENST00000397007 SLC52A2Q9HAB3 445 aa14.11□□□□□ -0.15
NUP98-205ENST00000397007 IL16Q14005 1332 aa14.11□□□□□ -0.15
NUP98-205ENST00000397007 PLSCR1O15162 318 aa14.11□□□□□ -0.15
NUP98-205ENST00000397007 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
NUP98-205ENST00000397007 HSP90AB1P08238 724 aaKnown RBP14.1□□□□□ -0.15
NUP98-205ENST00000397007 PROM2Q8N271 834 aa14.1□□□□□ -0.15
NUP98-205ENST00000397007 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.15
NUP98-205ENST00000397007 ZNF530Q6P9A1 599 aaPredicted RBP14.1□□□□□ -0.15
NUP98-205ENST00000397007 PIGBQ92521 554 aa14.1□□□□□ -0.15
NUP98-205ENST00000397007 SLC4A9Q96Q91 983 aa14.09□□□□□ -0.15
NUP98-205ENST00000397007 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
NUP98-205ENST00000397007 CCDC125Q86Z20 511 aa14.09□□□□□ -0.15
NUP98-205ENST00000397007 KCNQ2O43526 872 aa14.09□□□□□ -0.15
NUP98-205ENST00000397007 LAMB2P55268 1798 aa14.08□□□□□ -0.16
NUP98-205ENST00000397007 WWC1Q8IX03 1113 aa14.08□□□□□ -0.16
NUP98-205ENST00000397007 CHL1O00533 1208 aa14.07□□□□□ -0.16
NUP98-205ENST00000397007 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
NUP98-205ENST00000397007 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
NUP98-205ENST00000397007 LRP5O75197 1615 aa14.07□□□□□ -0.16
NUP98-205ENST00000397007 NUP98P52948 1817 aa14.07□□□□□ -0.16
NUP98-205ENST00000397007 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
NUP98-205ENST00000397007 WDR43Q15061 677 aaKnown RBP eCLIP14.06□□□□□ -0.16
NUP98-205ENST00000397007 APAF1O14727 1248 aa14.06□□□□□ -0.16
NUP98-205ENST00000397007 FAM182BQ5T319 152 aa14.05□□□□□ -0.16
NUP98-205ENST00000397007 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
NUP98-205ENST00000397007 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
NUP98-205ENST00000397007 LRP10Q7Z4F1 713 aa14.05□□□□□ -0.16
NUP98-205ENST00000397007 WDR63Q8IWG1 891 aa14.05□□□□□ -0.16
NUP98-205ENST00000397007 DLEC1Q9Y238 1755 aa14.05□□□□□ -0.16
NUP98-205ENST00000397007 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
NUP98-205ENST00000397007 PDE3BQ13370 1112 aa14.04□□□□□ -0.16
NUP98-205ENST00000397007 PRIM1P49642 420 aaKnown RBP14.03□□□□□ -0.16
NUP98-205ENST00000397007 RIPK4P57078 832 aa14.03□□□□□ -0.16
NUP98-205ENST00000397007 MCM10Q7L590 875 aa14.03□□□□□ -0.16
NUP98-205ENST00000397007 VSIG10Q8N0Z9 540 aa14.03□□□□□ -0.16
NUP98-205ENST00000397007 PALLDQ8WX93 1383 aa14.03□□□□□ -0.16
NUP98-205ENST00000397007 AFDNP55196 1824 aaKnown RBP14.03□□□□□ -0.16
NUP98-205ENST00000397007 IFT57Q9NWB7 429 aa14.02□□□□□ -0.16
NUP98-205ENST00000397007 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.17
NUP98-205ENST00000397007 CFAP44Q96MT7 982 aa14.02□□□□□ -0.17
NUP98-205ENST00000397007 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.17
NUP98-205ENST00000397007 BRCA1P38398 1863 aaKnown RBP14.02□□□□□ -0.17
NUP98-205ENST00000397007 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.17
NUP98-205ENST00000397007 DCTN1Q14203 1278 aa14.02□□□□□ -0.17
NUP98-205ENST00000397007 NFATC2IPQ8NCF5 419 aa14.01□□□□□ -0.17
NUP98-205ENST00000397007 C1orf141Q5JVX7 400 aa14.01□□□□□ -0.17
NUP98-205ENST00000397007 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
NUP98-205ENST00000397007 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
NUP98-205ENST00000397007 EIF4A1P60842 406 aaKnown RBP14□□□□□ -0.17
NUP98-205ENST00000397007 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
NUP98-205ENST00000397007 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
NUP98-205ENST00000397007 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
NUP98-205ENST00000397007 DDX60Q8IY21 1712 aaKnown RBP13.99□□□□□ -0.17
NUP98-205ENST00000397007 TRIM37O94972 964 aa13.99□□□□□ -0.17
NUP98-205ENST00000397007 TAF7Q15545 349 aaPredicted RBP13.99□□□□□ -0.17
NUP98-205ENST00000397007 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
NUP98-205ENST00000397007 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
NUP98-205ENST00000397007 KCNQ3O43525 872 aa13.99□□□□□ -0.17
NUP98-205ENST00000397007 SLC27A3Q5K4L6 730 aa13.99□□□□□ -0.17
NUP98-205ENST00000397007 THUMPD2Q9BTF0 503 aaKnown RBP13.99□□□□□ -0.17
NUP98-205ENST00000397007 CNTNAP4Q9C0A0 1308 aa13.98□□□□□ -0.17
NUP98-205ENST00000397007 SLFN5Q08AF3 891 aa13.98□□□□□ -0.17
NUP98-205ENST00000397007 ITPK1Q13572 414 aa13.98□□□□□ -0.17
NUP98-205ENST00000397007 ANKRD31Q8N7Z5 1873 aa13.98□□□□□ -0.17
NUP98-205ENST00000397007 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
NUP98-205ENST00000397007 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
NUP98-205ENST00000397007 SOCS7O14512 581 aa13.97□□□□□ -0.17
NUP98-205ENST00000397007 ACSBG1Q96GR2 724 aa13.97□□□□□ -0.17
NUP98-205ENST00000397007 HOXB7P09629 217 aa13.96□□□□□ -0.17
NUP98-205ENST00000397007 FAM9BQ8IZU0 186 aa13.96□□□□□ -0.17
NUP98-205ENST00000397007 TMOD3Q9NYL9 352 aa13.96□□□□□ -0.17
NUP98-205ENST00000397007 PDIA6Q15084 440 aa13.96□□□□□ -0.17
NUP98-205ENST00000397007 DUSP27Q5VZP5 1158 aa13.96□□□□□ -0.18
NUP98-205ENST00000397007 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.18
NUP98-205ENST00000397007 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
NUP98-205ENST00000397007 RC3H1Q5TC82 1133 aaKnown RBP13.95□□□□□ -0.18
NUP98-205ENST00000397007 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
NUP98-205ENST00000397007 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
NUP98-205ENST00000397007 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
NUP98-205ENST00000397007 CABP4P57796 275 aa13.95□□□□□ -0.18
NUP98-205ENST00000397007 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
NUP98-205ENST00000397007 A0A1B0GUL6 1792 aa13.95□□□□□ -0.18
NUP98-205ENST00000397007 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
NUP98-205ENST00000397007 CYP19A1P11511 503 aaPredicted RBP13.94□□□□□ -0.18
NUP98-205ENST00000397007 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
NUP98-205ENST00000397007 SIK1P57059 783 aa13.93□□□□□ -0.18
NUP98-205ENST00000397007 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
NUP98-205ENST00000397007 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
NUP98-205ENST00000397007 BTBD11A6QL63 1104 aa13.92□□□□□ -0.18
NUP98-205ENST00000397007 RGL2O15211 777 aa13.92□□□□□ -0.18
NUP98-205ENST00000397007 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
NUP98-205ENST00000397007 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
NUP98-205ENST00000397007 ZNF827Q17R98 1081 aa13.92□□□□□ -0.18
NUP98-205ENST00000397007 PRAMEF22A3QJZ6 481 aa13.91□□□□□ -0.18
NUP98-205ENST00000397007 GNAI1P63096 354 aa13.91□□□□□ -0.18
NUP98-205ENST00000397007 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
NUP98-205ENST00000397007 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
NUP98-205ENST00000397007 ERBB4Q15303 1308 aa13.91□□□□□ -0.18
NUP98-205ENST00000397007 TNRC6CQ9HCJ0 1690 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms