RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SPTY2D1Q68D10 685 aaPredicted RBP18.41■□□□□ 0.54
GNE-202ENST00000396594 TDO2P48775 406 aa18.41■□□□□ 0.54
GNE-202ENST00000396594 SMARCC1Q92922 1105 aaPredicted RBP18.41■□□□□ 0.54
GNE-202ENST00000396594 BACH2Q9BYV9 841 aa18.41■□□□□ 0.54
GNE-202ENST00000396594 KIF2AO00139 706 aaPredicted RBP18.41■□□□□ 0.54
GNE-202ENST00000396594 HSP90AA2PQ14568 343 aaPredicted RBP18.41■□□□□ 0.54
GNE-202ENST00000396594 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
GNE-202ENST00000396594 CDCA7LQ96GN5 454 aa18.41■□□□□ 0.54
GNE-202ENST00000396594 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 AIDAQ96BJ3 306 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 RAB34Q9BZG1 259 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 TRAK2O60296 914 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 DNAAF4Q8WXU2 420 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 MX1P20591 662 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
GNE-202ENST00000396594 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.54
GNE-202ENST00000396594 CCDC12Q8WUD4 166 aaPredicted RBP18.39■□□□□ 0.53
GNE-202ENST00000396594 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
GNE-202ENST00000396594 FGFR1OPO95684 399 aaKnown RBP18.39■□□□□ 0.53
GNE-202ENST00000396594 HMG20BQ9P0W2 317 aa18.39■□□□□ 0.53
GNE-202ENST00000396594 CTAGE5O15320 804 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 CEP57L1Q8IYX8 460 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 NAP1L1P55209 391 aaKnown RBP18.38■□□□□ 0.53
GNE-202ENST00000396594 UQCRFS1P1P0C7P4 283 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
GNE-202ENST00000396594 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 LRP2BPQ9P2M1 347 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 EXOC5O00471 708 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
GNE-202ENST00000396594 METTL24Q5JXM2 366 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 INSRP06213 1382 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 SYCP2Q9BX26 1530 aa18.38■□□□□ 0.53
GNE-202ENST00000396594 LARP1BQ659C4 914 aaKnown RBP18.37■□□□□ 0.53
GNE-202ENST00000396594 PPFIBP1Q86W92 1011 aa18.37■□□□□ 0.53
GNE-202ENST00000396594 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
GNE-202ENST00000396594 NFKBIBQ15653 356 aa18.37■□□□□ 0.53
GNE-202ENST00000396594 TRIM5Q9C035 493 aa18.37■□□□□ 0.53
GNE-202ENST00000396594 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
GNE-202ENST00000396594 PPP1R12BO60237 982 aaPredicted RBP18.37■□□□□ 0.53
GNE-202ENST00000396594 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
GNE-202ENST00000396594 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
GNE-202ENST00000396594 SCAND2PQ9GZW5 306 aaPredicted RBP18.36■□□□□ 0.53
GNE-202ENST00000396594 CAVIN2O95810 425 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 GSTO1P78417 241 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
GNE-202ENST00000396594 KRT28Q7Z3Y7 464 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 TNMDQ9H2S6 317 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 ADGRL2O95490 1459 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 EVI5LQ96CN4 794 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 GTPBP4Q9BZE4 634 aaKnown RBP18.36■□□□□ 0.53
GNE-202ENST00000396594 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
GNE-202ENST00000396594 RRP12Q5JTH9 1297 aaKnown RBP18.36■□□□□ 0.53
GNE-202ENST00000396594 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
GNE-202ENST00000396594 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
GNE-202ENST00000396594 BCAR3O75815 825 aa18.35■□□□□ 0.53
GNE-202ENST00000396594 LRRC27Q9C0I9 530 aa18.35■□□□□ 0.53
GNE-202ENST00000396594 ZFYP08048 801 aaPredicted RBP18.35■□□□□ 0.53
GNE-202ENST00000396594 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
GNE-202ENST00000396594 PRAG1Q86YV5 1406 aa18.35■□□□□ 0.53
GNE-202ENST00000396594 MYL6BP14649 208 aa18.35■□□□□ 0.53
GNE-202ENST00000396594 HSP90AB2PQ58FF8 381 aa18.35■□□□□ 0.53
GNE-202ENST00000396594 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
GNE-202ENST00000396594 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
GNE-202ENST00000396594 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
GNE-202ENST00000396594 CWC15Q9P013 229 aaKnown RBP18.34■□□□□ 0.53
GNE-202ENST00000396594 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
GNE-202ENST00000396594 TMEM132AQ24JP5 1023 aa18.33■□□□□ 0.53
GNE-202ENST00000396594 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.53
GNE-202ENST00000396594 ZNF592Q92610 1267 aa18.33■□□□□ 0.53
GNE-202ENST00000396594 IQCA1Q86XH1 822 aa18.33■□□□□ 0.52
GNE-202ENST00000396594 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.52
GNE-202ENST00000396594 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
GNE-202ENST00000396594 BMP15O95972 392 aa18.32■□□□□ 0.52
GNE-202ENST00000396594 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
GNE-202ENST00000396594 NEO1Q92859 1461 aa18.32■□□□□ 0.52
GNE-202ENST00000396594 ZRSR2Q15696 482 aaKnown RBP18.32■□□□□ 0.52
GNE-202ENST00000396594 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
GNE-202ENST00000396594 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 ME1P48163 572 aa18.31■□□□□ 0.52
GNE-202ENST00000396594 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 MPHOSPH6Q99547 160 aaKnown RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
GNE-202ENST00000396594 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 CWC25Q9NXE8 425 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 ERLIN1O75477 346 aa18.31■□□□□ 0.52
GNE-202ENST00000396594 CTCFLQ8NI51 663 aaPredicted RBP18.31■□□□□ 0.52
GNE-202ENST00000396594 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 PDILTQ8N807 584 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 KIF5BP33176 963 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 NUP62CLQ9H1M0 184 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 TOM1O60784 492 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 BAG3O95817 575 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 CETN2P41208 172 aa18.3■□□□□ 0.52
GNE-202ENST00000396594 FLT4P35916 1363 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms