RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
SCAF11-203ENST00000395453 EYA1Q99502 592 aa18.61■□□□□ 0.57
SCAF11-203ENST00000395453 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
SCAF11-203ENST00000395453 KIF3CO14782 793 aa18.6■□□□□ 0.57
SCAF11-203ENST00000395453 CYP27B1O15528 508 aa18.6■□□□□ 0.57
SCAF11-203ENST00000395453 APLP1P51693 650 aa18.6■□□□□ 0.57
SCAF11-203ENST00000395453 AK7Q96M32 723 aa18.6■□□□□ 0.57
SCAF11-203ENST00000395453 PKD1L3Q7Z443 1732 aa18.59■□□□□ 0.57
SCAF11-203ENST00000395453 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.57
SCAF11-203ENST00000395453 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
SCAF11-203ENST00000395453 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
SCAF11-203ENST00000395453 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
SCAF11-203ENST00000395453 SMARCC1Q92922 1105 aaPredicted RBP18.57■□□□□ 0.56
SCAF11-203ENST00000395453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.566e-11■■■■□ 26.7
SCAF11-203ENST00000395453 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
SCAF11-203ENST00000395453 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
SCAF11-203ENST00000395453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.55■□□□□ 0.56
SCAF11-203ENST00000395453 PHF14O94880 888 aa18.55■□□□□ 0.56
SCAF11-203ENST00000395453 SPG7Q9UQ90 795 aa18.55■□□□□ 0.56
SCAF11-203ENST00000395453 C4BP0C0L5 1744 aa18.55■□□□□ 0.56
SCAF11-203ENST00000395453 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
SCAF11-203ENST00000395453 TOMM70O94826 608 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 SSFA2P28290 1259 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 DNAJC5GQ8N7S2 189 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 ITGB4P16144 1822 aa18.53■□□□□ 0.56
SCAF11-203ENST00000395453 MORC1Q86VD1 984 aa18.52■□□□□ 0.56
SCAF11-203ENST00000395453 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
SCAF11-203ENST00000395453 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
SCAF11-203ENST00000395453 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
SCAF11-203ENST00000395453 SMIM5Q71RC9 77 aa18.5■□□□□ 0.55
SCAF11-203ENST00000395453 CICQ96RK0 1608 aaPredicted RBP18.5■□□□□ 0.55
SCAF11-203ENST00000395453 PHKG2P15735 406 aa18.49■□□□□ 0.55
SCAF11-203ENST00000395453 POLA2Q14181 598 aa18.49■□□□□ 0.55
SCAF11-203ENST00000395453 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
SCAF11-203ENST00000395453 PIGBQ92521 554 aa18.49■□□□□ 0.55
SCAF11-203ENST00000395453 LOC102724428A0A0B4J2F2 783 aa18.49■□□□□ 0.55
SCAF11-203ENST00000395453 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
SCAF11-203ENST00000395453 SIK1P57059 783 aa18.49■□□□□ 0.55
SCAF11-203ENST00000395453 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
SCAF11-203ENST00000395453 GNPATO15228 680 aa18.47■□□□□ 0.55
SCAF11-203ENST00000395453 TGFB2P61812 414 aa18.47■□□□□ 0.55
SCAF11-203ENST00000395453 MMP10P09238 476 aa18.46■□□□□ 0.55
SCAF11-203ENST00000395453 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
SCAF11-203ENST00000395453 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
SCAF11-203ENST00000395453 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
SCAF11-203ENST00000395453 NMRK2Q9NPI5 230 aa18.44■□□□□ 0.54
SCAF11-203ENST00000395453 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
SCAF11-203ENST00000395453 IL13P35225 146 aa18.43■□□□□ 0.54
SCAF11-203ENST00000395453 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
SCAF11-203ENST00000395453 PLEKHO1Q53GL0 409 aaPredicted RBP18.43■□□□□ 0.54
SCAF11-203ENST00000395453 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
SCAF11-203ENST00000395453 RBM46Q8TBY0 533 aaKnown RBP18.43■□□□□ 0.54
SCAF11-203ENST00000395453 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
SCAF11-203ENST00000395453 A0A0G2JLW4 131 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 ERVV-2B6SEH9 535 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 ITPK1Q13572 414 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 NLGN1Q8N2Q7 840 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 KDRP35968 1356 aa18.42■□□□□ 0.54
SCAF11-203ENST00000395453 KLRG1Q96E93 195 aa18.41■□□□□ 0.54
SCAF11-203ENST00000395453 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
SCAF11-203ENST00000395453 KIF13BQ9NQT8 1826 aa18.41■□□□□ 0.54
SCAF11-203ENST00000395453 FCHSD2O94868 740 aa18.4■□□□□ 0.54
SCAF11-203ENST00000395453 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
SCAF11-203ENST00000395453 MTHFSP49914 203 aa18.4■□□□□ 0.54
SCAF11-203ENST00000395453 FSTL1Q12841 308 aa18.4■□□□□ 0.54
SCAF11-203ENST00000395453 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
SCAF11-203ENST00000395453 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
SCAF11-203ENST00000395453 C10orf71Q711Q0 1435 aa18.39■□□□□ 0.53
SCAF11-203ENST00000395453 COL13A1Q5TAT6 717 aaPredicted RBP18.39■□□□□ 0.53
SCAF11-203ENST00000395453 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
SCAF11-203ENST00000395453 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
SCAF11-203ENST00000395453 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
SCAF11-203ENST00000395453 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
SCAF11-203ENST00000395453 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
SCAF11-203ENST00000395453 NPC1L1Q9UHC9 1359 aa18.38■□□□□ 0.53
SCAF11-203ENST00000395453 DPEP1P16444 411 aa18.38■□□□□ 0.53
SCAF11-203ENST00000395453 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
SCAF11-203ENST00000395453 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
SCAF11-203ENST00000395453 KIAA1551Q9HCM1 1747 aa18.38■□□□□ 0.53
SCAF11-203ENST00000395453 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
SCAF11-203ENST00000395453 PCNTO95613 3336 aa18.37■□□□□ 0.53
SCAF11-203ENST00000395453 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
SCAF11-203ENST00000395453 HTRA3P83110 453 aa18.36■□□□□ 0.53
SCAF11-203ENST00000395453 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
SCAF11-203ENST00000395453 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
SCAF11-203ENST00000395453 PARP3Q9Y6F1 533 aa18.35■□□□□ 0.53
SCAF11-203ENST00000395453 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
SCAF11-203ENST00000395453 ARHGEF1Q92888 912 aaKnown RBP18.34■□□□□ 0.53
SCAF11-203ENST00000395453 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
SCAF11-203ENST00000395453 RFC4P35249 363 aa18.33■□□□□ 0.53
SCAF11-203ENST00000395453 CABP4P57796 275 aa18.33■□□□□ 0.53
SCAF11-203ENST00000395453 C1orf141Q5JVX7 400 aa18.33■□□□□ 0.53
SCAF11-203ENST00000395453 RC3H1Q5TC82 1133 aaKnown RBP18.33■□□□□ 0.53
SCAF11-203ENST00000395453 TNS4Q8IZW8 715 aa18.33■□□□□ 0.53
SCAF11-203ENST00000395453 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms