RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.57■■■□□ 2.64
CTF1-202ENST00000395019 SPG7Q9UQ90 795 aa31.57■■■□□ 2.64
CTF1-202ENST00000395019 ALDH1L2Q3SY69 923 aa31.57■■■□□ 2.64
CTF1-202ENST00000395019 IL17REQ8NFR9 667 aa31.57■■■□□ 2.64
CTF1-202ENST00000395019 DDX54Q8TDD1 881 aaKnown RBP31.57■■■□□ 2.64
CTF1-202ENST00000395019 VAMP4O75379 141 aa31.56■■■□□ 2.64
CTF1-202ENST00000395019 SSH1Q8WYL5 1049 aa31.56■■■□□ 2.64
CTF1-202ENST00000395019 BCL2L13Q9BXK5 485 aa31.56■■■□□ 2.64
CTF1-202ENST00000395019 B4GALNT3Q6L9W6 998 aa31.55■■■□□ 2.64
CTF1-202ENST00000395019 TOGARAM1Q9Y4F4 1720 aa31.55■■■□□ 2.64
CTF1-202ENST00000395019 CANXP27824 592 aaKnown RBP31.54■■■□□ 2.64
CTF1-202ENST00000395019 AKAP4Q5JQC9 854 aa31.54■■■□□ 2.64
CTF1-202ENST00000395019 SMC4Q9NTJ3 1288 aa31.54■■■□□ 2.64
CTF1-202ENST00000395019 PCDH11XQ9BZA7 1347 aa31.54■■■□□ 2.64
CTF1-202ENST00000395019 PCDH11YQ9BZA8 1340 aa31.54■■■□□ 2.64
CTF1-202ENST00000395019 MARCH10Q8NA82 808 aaPredicted RBP31.53■■■□□ 2.64
CTF1-202ENST00000395019 SCN11AQ9UI33 1791 aa31.53■■■□□ 2.64
CTF1-202ENST00000395019 PHKG2P15735 406 aa31.53■■■□□ 2.64
CTF1-202ENST00000395019 TSPYL6Q8N831 410 aa31.53■■■□□ 2.64
CTF1-202ENST00000395019 TWISTNBQ3B726 338 aaPredicted RBP31.52■■■□□ 2.64
CTF1-202ENST00000395019 FAM182BQ5T319 152 aa31.52■■■□□ 2.64
CTF1-202ENST00000395019 C8orf58Q8NAV2 365 aa31.52■■■□□ 2.64
CTF1-202ENST00000395019 FRAT1Q92837 279 aaPredicted RBP31.52■■■□□ 2.64
CTF1-202ENST00000395019 BABAM1Q9NWV8 329 aa31.52■■■□□ 2.64
CTF1-202ENST00000395019 CEMIPQ8WUJ3 1361 aa31.52■■■□□ 2.64
CTF1-202ENST00000395019 ADAMTS7Q9UKP4 1686 aa31.51■■■□□ 2.63
CTF1-202ENST00000395019 BRPF1P55201 1214 aaPredicted RBP31.5■■■□□ 2.63
CTF1-202ENST00000395019 DOT1LQ8TEK3 1739 aa31.5■■■□□ 2.63
CTF1-202ENST00000395019 CCDC136Q96JN2 1154 aa31.49■■■□□ 2.63
CTF1-202ENST00000395019 TSPYL4Q9UJ04 414 aa31.49■■■□□ 2.63
CTF1-202ENST00000395019 KDM6AO15550 1401 aaPredicted RBP31.49■■■□□ 2.63
CTF1-202ENST00000395019 IFNL2Q8IZJ0 200 aa31.49■■■□□ 2.63
CTF1-202ENST00000395019 C1orf141Q5JVX7 400 aa31.48■■■□□ 2.63
CTF1-202ENST00000395019 KAT6BQ8WYB5 2073 aa31.48■■■□□ 2.63
CTF1-202ENST00000395019 TAF7Q15545 349 aaPredicted RBP31.47■■■□□ 2.63
CTF1-202ENST00000395019 ZKSCAN2Q63HK3 967 aa31.47■■■□□ 2.63
CTF1-202ENST00000395019 MPRIPQ6WCQ1 1025 aa31.47■■■□□ 2.63
CTF1-202ENST00000395019 PELP1Q8IZL8 1130 aaKnown RBP31.46■■■□□ 2.63
CTF1-202ENST00000395019 ITGB4P16144 1822 aa31.46■■■□□ 2.63
CTF1-202ENST00000395019 SBF2Q86WG5 1849 aa31.46■■■□□ 2.63
CTF1-202ENST00000395019 ELL2O00472 640 aaPredicted RBP31.46■■■□□ 2.63
CTF1-202ENST00000395019 LGR6Q9HBX8 967 aa31.46■■■□□ 2.63
CTF1-202ENST00000395019 KIF16BQ96L93 1317 aa31.45■■■□□ 2.63
CTF1-202ENST00000395019 MIS18AQ9NYP9 233 aa31.45■■■□□ 2.62
CTF1-202ENST00000395019 MS4A1P11836 297 aa31.44■■■□□ 2.62
CTF1-202ENST00000395019 KRT27Q7Z3Y8 459 aa31.43■■■□□ 2.62
CTF1-202ENST00000395019 SIPA1L3O60292 1781 aaPredicted RBP31.43■■■□□ 2.62
CTF1-202ENST00000395019 NKX1-1Q15270 411 aaPredicted RBP31.42■■■□□ 2.62
CTF1-202ENST00000395019 MRPL50Q8N5N7 158 aaKnown RBP31.42■■■□□ 2.62
CTF1-202ENST00000395019 PANK1Q8TE04 598 aa31.42■■■□□ 2.62
CTF1-202ENST00000395019 RNMTO43148 476 aaKnown RBP31.42■■■□□ 2.62
CTF1-202ENST00000395019 NOB1Q9ULX3 412 aaKnown RBP31.42■■■□□ 2.62
CTF1-202ENST00000395019 IPO8O15397 1037 aaKnown RBP31.41■■■□□ 2.62
CTF1-202ENST00000395019 KRT24Q2M2I5 525 aa31.4■■■□□ 2.62
CTF1-202ENST00000395019 ATF7IPQ6VMQ6 1270 aa31.39■■■□□ 2.62
CTF1-202ENST00000395019 TNNQ9UQP3 1299 aa31.38■■■□□ 2.61
CTF1-202ENST00000395019 RLBP1P12271 317 aa31.38■■■□□ 2.61
CTF1-202ENST00000395019 DZIP1LQ8IYY4 767 aaKnown RBP31.38■■■□□ 2.61
CTF1-202ENST00000395019 COG6Q9Y2V7 657 aa31.38■■■□□ 2.61
CTF1-202ENST00000395019 TRIM27P14373 513 aa31.37■■■□□ 2.61
CTF1-202ENST00000395019 TEFQ10587 303 aa31.37■■■□□ 2.61
CTF1-202ENST00000395019 DCAF5Q96JK2 942 aa31.37■■■□□ 2.61
CTF1-202ENST00000395019 SOS1Q07889 1333 aaPredicted RBP31.36■■■□□ 2.61
CTF1-202ENST00000395019 MRC1P22897 1456 aa31.35■■■□□ 2.61
CTF1-202ENST00000395019 ARHGAP45Q92619 1136 aa31.35■■■□□ 2.61
CTF1-202ENST00000395019 ACSBG1Q96GR2 724 aa31.35■■■□□ 2.61
CTF1-202ENST00000395019 HSP90AB1P08238 724 aaKnown RBP31.35■■■□□ 2.61
CTF1-202ENST00000395019 NHSQ6T4R5 1651 aa31.34■■■□□ 2.61
CTF1-202ENST00000395019 FTSJ3Q8IY81 847 aaKnown RBP31.34■■■□□ 2.61
CTF1-202ENST00000395019 CLUAP1Q96AJ1 413 aa31.34■■■□□ 2.61
CTF1-202ENST00000395019 AAMPQ13685 434 aa31.33■■■□□ 2.61
CTF1-202ENST00000395019 PTF1AQ7RTS3 328 aa31.31■■■□□ 2.6
CTF1-202ENST00000395019 KDM3BQ7LBC6 1761 aa31.31■■■□□ 2.6
CTF1-202ENST00000395019 BCL9O00512 1426 aa31.31■■■□□ 2.6
CTF1-202ENST00000395019 KCNQ2O43526 872 aa31.31■■■□□ 2.6
CTF1-202ENST00000395019 MVPQ14764 893 aaKnown RBP31.31■■■□□ 2.6
CTF1-202ENST00000395019 TCERG1O14776 1098 aaKnown RBP31.3■■■□□ 2.6
CTF1-202ENST00000395019 PRIM1P49642 420 aaKnown RBP31.29■■■□□ 2.6
CTF1-202ENST00000395019 BTAF1O14981 1849 aa31.29■■■□□ 2.6
CTF1-202ENST00000395019 BTBD11A6QL63 1104 aa31.28■■■□□ 2.6
CTF1-202ENST00000395019 NFATC2IPQ8NCF5 419 aa31.27■■■□□ 2.6
CTF1-202ENST00000395019 SLC52A2Q9HAB3 445 aa31.27■■■□□ 2.6
CTF1-202ENST00000395019 PAPPAQ13219 1627 aa31.27■■■□□ 2.6
CTF1-202ENST00000395019 ERVV-2B6SEH9 535 aa31.27■■■□□ 2.6
CTF1-202ENST00000395019 EIF4A1P60842 406 aaKnown RBP31.26■■■□□ 2.59
CTF1-202ENST00000395019 SYTL4Q96C24 671 aaPredicted RBP31.26■■■□□ 2.59
CTF1-202ENST00000395019 CABP4P57796 275 aa31.25■■■□□ 2.59
CTF1-202ENST00000395019 FAM196AQ6ZSG2 479 aa31.25■■■□□ 2.59
CTF1-202ENST00000395019 API5Q9BZZ5 524 aaKnown RBP31.24■■■□□ 2.59
CTF1-202ENST00000395019 PIGBQ92521 554 aa31.24■■■□□ 2.59
CTF1-202ENST00000395019 TMEM57Q8N5G2 664 aa31.23■■■□□ 2.59
CTF1-202ENST00000395019 TNS1Q9HBL0 1735 aaKnown RBP31.22■■■□□ 2.59
CTF1-202ENST00000395019 HOXB7P09629 217 aa31.22■■■□□ 2.59
CTF1-202ENST00000395019 CCDC30Q5VVM6 783 aa31.22■■■□□ 2.59
CTF1-202ENST00000395019 DDX19BQ9UMR2 479 aa31.22■■■□□ 2.59
CTF1-202ENST00000395019 TMOD3Q9NYL9 352 aa31.21■■■□□ 2.59
CTF1-202ENST00000395019 ABCC4O15439 1325 aa31.2■■■□□ 2.59
CTF1-202ENST00000395019 KCNQ3O43525 872 aa31.2■■■□□ 2.59
CTF1-202ENST00000395019 PTPRCP08575 1304 aa31.2■■■□□ 2.58
CTF1-202ENST00000395019 TRIM37O94972 964 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms