RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TXLNBQ8N3L3 684 aa14.27□□□□□ -0.12
SIN3A-202ENST00000394947 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.12
SIN3A-202ENST00000394947 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.12
SIN3A-202ENST00000394947 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.12
SIN3A-202ENST00000394947 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.12
SIN3A-202ENST00000394947 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
SIN3A-202ENST00000394947 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.13
SIN3A-202ENST00000394947 HOOK3Q86VS8 718 aa14.27□□□□□ -0.13
SIN3A-202ENST00000394947 CKAP2LQ8IYA6 745 aa14.27□□□□□ -0.13
SIN3A-202ENST00000394947 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
SIN3A-202ENST00000394947 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
SIN3A-202ENST00000394947 C16orf45Q96MC5 204 aaPredicted RBP14.26□□□□□ -0.13
SIN3A-202ENST00000394947 TRIM21P19474 475 aaKnown RBP14.26□□□□□ -0.13
SIN3A-202ENST00000394947 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
SIN3A-202ENST00000394947 AIDAQ96BJ3 306 aa14.26□□□□□ -0.13
SIN3A-202ENST00000394947 HSP90AA4PQ58FG1 418 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 PPM1EQ8WY54 764 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 TATP17735 454 aaPredicted RBP14.25□□□□□ -0.13
SIN3A-202ENST00000394947 CCT2P78371 535 aaKnown RBP14.25□□□□□ -0.13
SIN3A-202ENST00000394947 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 SMTNL1A8MU46 457 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 KIF5CO60282 957 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 AKNAQ7Z591 1439 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 CNTLNQ9NXG0 1405 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 WWC3Q9ULE0 1092 aa14.25□□□□□ -0.13
SIN3A-202ENST00000394947 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
SIN3A-202ENST00000394947 RRS1Q15050 365 aaKnown RBP14.24□□□□□ -0.13
SIN3A-202ENST00000394947 TCERG1LQ5VWI1 586 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 PPP4R3AQ6IN85 833 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 DPH6Q7L8W6 267 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 BTBD11A6QL63 1104 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
SIN3A-202ENST00000394947 GJC1P36383 396 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 TXNDC2Q86VQ3 553 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 TSG101Q99816 390 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
SIN3A-202ENST00000394947 MYO1BO43795 1136 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 OTUD6BQ8N6M0 293 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 CETN2P41208 172 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 MXRA7P84157 204 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 GDPD2Q9HCC8 539 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 GCOM1H8Y6P7 765 aaPredicted RBP14.23□□□□□ -0.13
SIN3A-202ENST00000394947 PPP1R12BO60237 982 aaPredicted RBP14.23□□□□□ -0.13
SIN3A-202ENST00000394947 MYZAPP0CAP1 466 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 BMS1Q14692 1282 aaKnown RBP14.23□□□□□ -0.13
SIN3A-202ENST00000394947 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 PRC1O43663 620 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 MCM2P49736 904 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 PPARDQ03181 441 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
SIN3A-202ENST00000394947 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
SIN3A-202ENST00000394947 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
SIN3A-202ENST00000394947 BOLA2Q9H3K6 86 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 TMEM110-MUSTN1A8MSY1 372 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 CDKL5O76039 1030 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 TNIP1Q15025 636 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 METTL24Q5JXM2 366 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 KIF20AO95235 890 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 ZNF530Q6P9A1 599 aaPredicted RBP14.22□□□□□ -0.13
SIN3A-202ENST00000394947 CCDC175P0C221 793 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 CCDC150Q8NCX0 1101 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
SIN3A-202ENST00000394947 CCDC18Q5T9S5 1454 aa14.21□□□□□ -0.13
SIN3A-202ENST00000394947 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.13
SIN3A-202ENST00000394947 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
SIN3A-202ENST00000394947 SMG6Q86US8 1419 aaKnown RBP14.21□□□□□ -0.13
SIN3A-202ENST00000394947 PSMC4P43686 418 aa14.21□□□□□ -0.13
SIN3A-202ENST00000394947 IMMTQ16891 758 aaKnown RBP14.21□□□□□ -0.13
SIN3A-202ENST00000394947 SAMM50Q9Y512 469 aa14.21□□□□□ -0.13
SIN3A-202ENST00000394947 ZWINTO95229 277 aa14.21□□□□□ -0.13
SIN3A-202ENST00000394947 PTCD1O75127 700 aaKnown RBP14.21□□□□□ -0.14
SIN3A-202ENST00000394947 FERP16591 822 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
SIN3A-202ENST00000394947 TMC6Q7Z403 805 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 A0A1W2PRG0 241 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 SMIM23A6NLE4 172 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
SIN3A-202ENST00000394947 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.142e-7■■■■□ 20.4
SIN3A-202ENST00000394947 PROSER2Q86WR7 435 aaPredicted RBP14.19□□□□□ -0.14
SIN3A-202ENST00000394947 GPRASP1Q5JY77 1395 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 IGHMBP2P38935 993 aaKnown RBP14.19□□□□□ -0.14
SIN3A-202ENST00000394947 SPATA24Q86W54 205 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 JADE2Q9NQC1 790 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 MTIF2P46199 727 aaKnown RBP14.19□□□□□ -0.14
SIN3A-202ENST00000394947 GCC1Q96CN9 775 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 AKNAD1Q5T1N1 836 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 PRAM1Q96QH2 718 aa14.19□□□□□ -0.14
SIN3A-202ENST00000394947 CFAP58Q5T655 872 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 SYCP3Q8IZU3 236 aa14.18□□□□□ -0.14
SIN3A-202ENST00000394947 RBM27Q9P2N5 1060 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms