RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
PCDH1-203ENST00000394536 CEBPZQ03701 1054 aaKnown RBP19.37■□□□□ 0.69
PCDH1-203ENST00000394536 FAM184AQ8NB25 1140 aa19.37■□□□□ 0.69
PCDH1-203ENST00000394536 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
PCDH1-203ENST00000394536 ZFYVE9O95405 1425 aa19.37■□□□□ 0.69
PCDH1-203ENST00000394536 CPA1P15085 419 aa19.36■□□□□ 0.69
PCDH1-203ENST00000394536 HCLS1P14317 486 aaPredicted RBP19.36■□□□□ 0.69
PCDH1-203ENST00000394536 TMEM63CQ9P1W3 806 aa19.36■□□□□ 0.69
PCDH1-203ENST00000394536 HDAC5Q9UQL6 1122 aa19.36■□□□□ 0.69
PCDH1-203ENST00000394536 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
PCDH1-203ENST00000394536 CAMK4Q16566 473 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
PCDH1-203ENST00000394536 USP48Q86UV5 1035 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 SPHKAPQ2M3C7 1700 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 ABCA6Q8N139 1617 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 PI4KAP2A4QPH2 592 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 AACSQ86V21 672 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 PI4KAP1Q8N8J0 262 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 POGZQ7Z3K3 1410 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 TET3O43151 1660 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
PCDH1-203ENST00000394536 CHMLP26374 656 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 ZNF530Q6P9A1 599 aaPredicted RBP19.34■□□□□ 0.69
PCDH1-203ENST00000394536 KIF1BPQ96EK5 621 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 PDRG1Q9NUG6 133 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 CHD1O14646 1710 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 TCEANC2Q96MN5 208 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 CNPY2Q9Y2B0 182 aa19.34■□□□□ 0.69
PCDH1-203ENST00000394536 EYA1Q99502 592 aa19.33■□□□□ 0.69
PCDH1-203ENST00000394536 PHAXQ9H814 394 aaKnown RBP19.33■□□□□ 0.69
PCDH1-203ENST00000394536 AMOTL2Q9Y2J4 779 aa19.33■□□□□ 0.69
PCDH1-203ENST00000394536 KIF1BO60333 1816 aa19.33■□□□□ 0.69
PCDH1-203ENST00000394536 ATP8B2P98198 1209 aa19.33■□□□□ 0.68
PCDH1-203ENST00000394536 NEXNQ0ZGT2 675 aa19.33■□□□□ 0.68
PCDH1-203ENST00000394536 ZNF853P0CG23 659 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 GIMAP6Q6P9H5 292 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 RHPN1Q8TCX5 695 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 ZMYND15Q9H091 742 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 MAP3K19Q56UN5 1328 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 GPT2Q8TD30 523 aa19.32■□□□□ 0.68
PCDH1-203ENST00000394536 CCDC8Q9H0W5 538 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-203ENST00000394536 TTC12Q9H892 705 aaPredicted RBP19.31■□□□□ 0.68
PCDH1-203ENST00000394536 RTL1A6NKG5 1358 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 BECN2A8MW95 431 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 GOLGA6L19H0YKK7 550 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 NECAB1Q8N987 351 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 TRIM5Q9C035 493 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 LIMCH1Q9UPQ0 1083 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 BOLA2Q9H3K6 86 aa19.31■□□□□ 0.68
PCDH1-203ENST00000394536 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 OFD1O75665 1012 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 ZKSCAN5Q9Y2L8 839 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 STX6O43752 255 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
PCDH1-203ENST00000394536 MYL6BP14649 208 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 ZNF445P59923 1031 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 TFIP11Q9UBB9 837 aaKnown RBP19.3■□□□□ 0.68
PCDH1-203ENST00000394536 HTATSF1O43719 755 aaKnown RBP19.3■□□□□ 0.68
PCDH1-203ENST00000394536 ESCO1Q5FWF5 840 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 GORABQ5T7V8 394 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 DNAJC2Q99543 621 aaKnown RBP19.3■□□□□ 0.68
PCDH1-203ENST00000394536 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
PCDH1-203ENST00000394536 ADCY5O95622 1261 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
PCDH1-203ENST00000394536 IQGAP1P46940 1657 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 NEUROD6Q96NK8 337 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 PDCL3Q9H2J4 239 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 YEATS2Q9ULM3 1422 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 DDX58O95786 925 aaKnown RBP19.29■□□□□ 0.68
PCDH1-203ENST00000394536 SASS6Q6UVJ0 657 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 DNAAF4Q8WXU2 420 aa19.29■□□□□ 0.68
PCDH1-203ENST00000394536 SF3A1Q15459 793 aaKnown RBP19.28■□□□□ 0.68
PCDH1-203ENST00000394536 NSFL1CQ9UNZ2 370 aaKnown RBP19.28■□□□□ 0.68
PCDH1-203ENST00000394536 RNF17Q9BXT8 1623 aaKnown RBP19.28■□□□□ 0.68
PCDH1-203ENST00000394536 PPFIA3O75145 1194 aa19.28■□□□□ 0.68
PCDH1-203ENST00000394536 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
PCDH1-203ENST00000394536 CKAP2LQ8IYA6 745 aa19.28■□□□□ 0.68
PCDH1-203ENST00000394536 CCDC183Q5T5S1 534 aa19.28■□□□□ 0.68
PCDH1-203ENST00000394536 RAB11FIP3O75154 756 aa19.27■□□□□ 0.68
PCDH1-203ENST00000394536 GJB2P29033 226 aa19.27■□□□□ 0.68
PCDH1-203ENST00000394536 DDX11Q96FC9 970 aa19.27■□□□□ 0.68
PCDH1-203ENST00000394536 PRDM10Q9NQV6 1147 aa19.27■□□□□ 0.68
PCDH1-203ENST00000394536 CHPF2Q9P2E5 772 aa19.27■□□□□ 0.68
PCDH1-203ENST00000394536 UNC5CLQ8IV45 518 aa19.27■□□□□ 0.67
PCDH1-203ENST00000394536 PA2G4Q9UQ80 394 aaKnown RBP19.27■□□□□ 0.67
PCDH1-203ENST00000394536 CCDC192P0DO97 292 aa19.26■□□□□ 0.67
PCDH1-203ENST00000394536 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
PCDH1-203ENST00000394536 KRT85P78386 507 aa19.26■□□□□ 0.67
PCDH1-203ENST00000394536 BLOC1S2Q6QNY1 142 aa19.26■□□□□ 0.67
PCDH1-203ENST00000394536 LETM1O95202 739 aaPredicted RBP19.26■□□□□ 0.67
PCDH1-203ENST00000394536 JARID2Q92833 1246 aaPredicted RBP19.26■□□□□ 0.67
PCDH1-203ENST00000394536 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
PCDH1-203ENST00000394536 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
PCDH1-203ENST00000394536 PSMA5P28066 241 aa19.25■□□□□ 0.67
PCDH1-203ENST00000394536 AK2P54819 239 aa19.25■□□□□ 0.67
PCDH1-203ENST00000394536 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms