RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 MYH16Q9H6N6 1097 aa29.28■■■□□ 2.28
RARA-203ENST00000394086 COL3A1P02461 1466 aaPredicted RBP29.28■■■□□ 2.28
RARA-203ENST00000394086 NCAPD2Q15021 1401 aa29.27■■■□□ 2.28
RARA-203ENST00000394086 LRRC37A3O60309 1634 aa29.27■■■□□ 2.28
RARA-203ENST00000394086 U2SURPO15042 1029 aaKnown RBP29.27■■■□□ 2.28
RARA-203ENST00000394086 SULT6B1Q6IMI4 303 aa29.27■■■□□ 2.28
RARA-203ENST00000394086 AEBP1Q8IUX7 1158 aa29.26■■■□□ 2.27
RARA-203ENST00000394086 ANTXR1Q9H6X2 564 aa29.25■■■□□ 2.27
RARA-203ENST00000394086 MARCH10Q8NA82 808 aaPredicted RBP29.24■■■□□ 2.27
RARA-203ENST00000394086 ZCRB1Q8TBF4 217 aaKnown RBP29.24■■■□□ 2.27
RARA-203ENST00000394086 TNS2Q63HR2 1409 aa29.24■■■□□ 2.27
RARA-203ENST00000394086 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
RARA-203ENST00000394086 HMOX1P09601 288 aa29.23■■■□□ 2.27
RARA-203ENST00000394086 OVOS2A0A0G2JMS6 1433 aa29.23■■■□□ 2.27
RARA-203ENST00000394086 SOCS7O14512 581 aa29.21■■■□□ 2.27
RARA-203ENST00000394086 SEC24BO95487 1268 aa29.21■■■□□ 2.27
RARA-203ENST00000394086 FAM196AQ6ZSG2 479 aa29.2■■■□□ 2.27
RARA-203ENST00000394086 RGPD1P0DJD0 1748 aa29.2■■■□□ 2.26
RARA-203ENST00000394086 EP400Q96L91 3159 aa29.2■■■□□ 2.26
RARA-203ENST00000394086 PDZRN3Q9UPQ7 1066 aa29.19■■■□□ 2.26
RARA-203ENST00000394086 PCDHB15Q9Y5E8 787 aa29.18■■■□□ 2.26
RARA-203ENST00000394086 KDRP35968 1356 aa29.17■■■□□ 2.26
RARA-203ENST00000394086 MVPQ14764 893 aaKnown RBP29.17■■■□□ 2.26
RARA-203ENST00000394086 U2AF1L5P0DN76 240 aaPredicted RBP29.16■■■□□ 2.26
RARA-203ENST00000394086 U2AF1Q01081 240 aaKnown RBP eCLIP29.16■■■□□ 2.26
RARA-203ENST00000394086 UPF1Q92900 1129 aaKnown RBP eCLIP29.16■■■□□ 2.26
RARA-203ENST00000394086 SPG7Q9UQ90 795 aa29.16■■■□□ 2.26
RARA-203ENST00000394086 ZKSCAN2Q63HK3 967 aa29.15■■■□□ 2.26
RARA-203ENST00000394086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.13■■■□□ 2.25
RARA-203ENST00000394086 PLEKHO1Q53GL0 409 aaPredicted RBP29.13■■■□□ 2.25
RARA-203ENST00000394086 TBC1D2Q9BYX2 928 aa29.13■■■□□ 2.25
RARA-203ENST00000394086 PCDH11XQ9BZA7 1347 aa29.12■■■□□ 2.25
RARA-203ENST00000394086 PCDH11YQ9BZA8 1340 aa29.12■■■□□ 2.25
RARA-203ENST00000394086 RLBP1P12271 317 aa29.11■■■□□ 2.25
RARA-203ENST00000394086 HDAC1Q13547 482 aaPredicted RBP29.11■■■□□ 2.25
RARA-203ENST00000394086 CYP27B1O15528 508 aa29.11■■■□□ 2.25
RARA-203ENST00000394086 TRIM37O94972 964 aa29.11■■■□□ 2.25
RARA-203ENST00000394086 AMOTQ4VCS5 1084 aa29.1■■■□□ 2.25
RARA-203ENST00000394086 DZIP1LQ8IYY4 767 aaKnown RBP29.09■■■□□ 2.25
RARA-203ENST00000394086 IL16Q14005 1332 aa29.09■■■□□ 2.25
RARA-203ENST00000394086 SLKQ9H2G2 1235 aaPredicted RBP29.08■■■□□ 2.25
RARA-203ENST00000394086 ACSBG1Q96GR2 724 aa29.08■■■□□ 2.25
RARA-203ENST00000394086 SHANK3Q9BYB0 1731 aa29.07■■■□□ 2.24
RARA-203ENST00000394086 DDX19BQ9UMR2 479 aa29.07■■■□□ 2.24
RARA-203ENST00000394086 PKD1L3Q7Z443 1732 aa29.07■■■□□ 2.24
RARA-203ENST00000394086 PRKAR2BP31323 418 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 ZNF530Q6P9A1 599 aaPredicted RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 PLEKHG2Q9H7P9 1386 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 BCL9O00512 1426 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 SF3B2Q13435 895 aaKnown RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 CCDC125Q86Z20 511 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 FTSJ3Q8IY81 847 aaKnown RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 CHMP5Q9NZZ3 219 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 ISY1Q9ULR0 285 aaKnown RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 FCHSD2O94868 740 aa29.05■■■□□ 2.24
RARA-203ENST00000394086 NEUROD2Q15784 382 aa29.05■■■□□ 2.24
RARA-203ENST00000394086 IFNL2Q8IZJ0 200 aa29.05■■■□□ 2.24
RARA-203ENST00000394086 PHKG2P15735 406 aa29.04■■■□□ 2.24
RARA-203ENST00000394086 RRP7AQ9Y3A4 280 aaKnown RBP29.04■■■□□ 2.24
RARA-203ENST00000394086 EIF5BO60841 1220 aaKnown RBP29.03■■■□□ 2.24
RARA-203ENST00000394086 PTF1AQ7RTS3 328 aa29.03■■■□□ 2.24
RARA-203ENST00000394086 KCNQ2O43526 872 aa29.03■■■□□ 2.24
RARA-203ENST00000394086 KAT6BQ8WYB5 2073 aa29.02■■■□□ 2.24
RARA-203ENST00000394086 MCM4P33991 863 aa29.01■■■□□ 2.24
RARA-203ENST00000394086 MTHFSDQ2M296 383 aaKnown RBP29.01■■■□□ 2.24
RARA-203ENST00000394086 C1orf141Q5JVX7 400 aa29.01■■■□□ 2.24
RARA-203ENST00000394086 C22orf23Q9BZE7 217 aa29.01■■■□□ 2.24
RARA-203ENST00000394086 FSD2A1L4K1 749 aa29.01■■■□□ 2.23
RARA-203ENST00000394086 SYTL4Q96C24 671 aaPredicted RBP29.01■■■□□ 2.23
RARA-203ENST00000394086 PHACTR3Q96KR7 559 aa29.01■■■□□ 2.23
RARA-203ENST00000394086 BCL11BQ9C0K0 894 aaPredicted RBP29■■■□□ 2.23
RARA-203ENST00000394086 NKX1-1Q15270 411 aaPredicted RBP28.99■■■□□ 2.23
RARA-203ENST00000394086 PRIM1P49642 420 aaKnown RBP28.99■■■□□ 2.23
RARA-203ENST00000394086 SMC5Q8IY18 1101 aa28.99■■■□□ 2.23
RARA-203ENST00000394086 GOLGA6L3A6NEY3 463 aa28.98■■■□□ 2.23
RARA-203ENST00000394086 APBA3O96018 575 aa28.98■■■□□ 2.23
RARA-203ENST00000394086 PNNQ9H307 717 aaKnown RBP28.98■■■□□ 2.23
RARA-203ENST00000394086 SBF2Q86WG5 1849 aa28.97■■■□□ 2.23
RARA-203ENST00000394086 DEFB132Q7Z7B7 95 aa28.96■■■□□ 2.23
RARA-203ENST00000394086 KIF16BQ96L93 1317 aa28.96■■■□□ 2.23
RARA-203ENST00000394086 DDX11L8A8MPP1 907 aa28.96■■■□□ 2.23
RARA-203ENST00000394086 HSP90AB1P08238 724 aaKnown RBP28.96■■■□□ 2.23
RARA-203ENST00000394086 AKAP4Q5JQC9 854 aa28.95■■■□□ 2.23
RARA-203ENST00000394086 TNNQ9UQP3 1299 aa28.95■■■□□ 2.23
RARA-203ENST00000394086 ATF7IPQ6VMQ6 1270 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 MPRIPQ6WCQ1 1025 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 GAS2L2Q8NHY3 880 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 ZNF428Q96B54 188 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 IPO8O15397 1037 aaKnown RBP28.94■■■□□ 2.22
RARA-203ENST00000394086 BAG6P46379 1132 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 DCAF5Q96JK2 942 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 BCL2L13Q9BXK5 485 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 SMC4Q9NTJ3 1288 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 PTMSP20962 102 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 SNX21Q969T3 373 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 PLEKHF1Q96S99 279 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 CHMP4BQ9H444 224 aaKnown RBP28.93■■■□□ 2.22
RARA-203ENST00000394086 HSCBQ8IWL3 235 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 EN1Q05925 392 aaPredicted RBP28.92■■■□□ 2.22
RARA-203ENST00000394086 CIZ1Q9ULV3 898 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms