RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 HMGN5P82970 282 aaKnown RBP19.68■□□□□ 0.74
PHTF1-205ENST00000393357 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
PHTF1-205ENST00000393357 CCDC183Q5T5S1 534 aa19.67■□□□□ 0.74
PHTF1-205ENST00000393357 CFAP74Q9C0B2 1584 aa19.67■□□□□ 0.74
PHTF1-205ENST00000393357 LRRCC1Q9C099 1032 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 WDR33Q9C0J8 1336 aaKnown RBP19.66■□□□□ 0.74
PHTF1-205ENST00000393357 KDM4AO75164 1064 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 KCNJ4P48050 445 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 STK3Q13188 491 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 CCDC186Q7Z3E2 898 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 SYT1P21579 422 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 CHMLP26374 656 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 KCNF1Q9H3M0 494 aa19.66■□□□□ 0.74
PHTF1-205ENST00000393357 MLECQ14165 292 aa19.65■□□□□ 0.74
PHTF1-205ENST00000393357 FBXO31Q5XUX0 539 aaPredicted RBP19.65■□□□□ 0.74
PHTF1-205ENST00000393357 TSPYL4Q9UJ04 414 aa19.65■□□□□ 0.74
PHTF1-205ENST00000393357 LARGE1O95461 756 aa19.65■□□□□ 0.74
PHTF1-205ENST00000393357 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
PHTF1-205ENST00000393357 TRIM5Q9C035 493 aa19.65■□□□□ 0.74
PHTF1-205ENST00000393357 MAP3K4Q9Y6R4 1608 aa19.65■□□□□ 0.74
PHTF1-205ENST00000393357 CASTP20810 708 aaKnown RBP19.64■□□□□ 0.74
PHTF1-205ENST00000393357 LRRFIP2Q9Y608 721 aaKnown RBP19.64■□□□□ 0.74
PHTF1-205ENST00000393357 RTL1A6NKG5 1358 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 GOLGA6L4A6NEF3 574 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 AK2P54819 239 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 ABCC1P33527 1531 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 STX6O43752 255 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 SURF6O75683 361 aaKnown RBP19.64■□□□□ 0.73
PHTF1-205ENST00000393357 RASEFQ8IZ41 740 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 PRIMPOLQ96LW4 560 aa19.64■□□□□ 0.73
PHTF1-205ENST00000393357 TRMT1Q9NXH9 659 aaKnown RBP19.63■□□□□ 0.73
PHTF1-205ENST00000393357 LTV1Q96GA3 475 aaPredicted RBP19.63■□□□□ 0.73
PHTF1-205ENST00000393357 COG3Q96JB2 828 aa19.63■□□□□ 0.73
PHTF1-205ENST00000393357 EIF2S2P20042 333 aaKnown RBP19.63■□□□□ 0.73
PHTF1-205ENST00000393357 SBNO2Q9Y2G9 1366 aa19.62■□□□□ 0.73
PHTF1-205ENST00000393357 IL13P35225 146 aa19.62■□□□□ 0.73
PHTF1-205ENST00000393357 RTF1Q92541 710 aaKnown RBP19.62■□□□□ 0.73
PHTF1-205ENST00000393357 GNAI2P04899 355 aa19.61■□□□□ 0.73
PHTF1-205ENST00000393357 TXNDC2Q86VQ3 553 aa19.61■□□□□ 0.73
PHTF1-205ENST00000393357 GJB2P29033 226 aa19.61■□□□□ 0.73
PHTF1-205ENST00000393357 PLCD3Q8N3E9 789 aa19.61■□□□□ 0.73
PHTF1-205ENST00000393357 CCDC9Q9Y3X0 531 aaKnown RBP19.61■□□□□ 0.73
PHTF1-205ENST00000393357 ZSCAN22P10073 491 aaPredicted RBP19.61■□□□□ 0.73
PHTF1-205ENST00000393357 TPD52L1Q16890 204 aaPredicted RBP19.61■□□□□ 0.73
PHTF1-205ENST00000393357 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
PHTF1-205ENST00000393357 DIAPH3Q9NSV4 1193 aa19.6■□□□□ 0.73
PHTF1-205ENST00000393357 ERCC4Q92889 916 aaPredicted RBP19.59■□□□□ 0.73
PHTF1-205ENST00000393357 NSD2O96028 1365 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 ANXA1P04083 346 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 TNNT1P13805 278 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 LMOD3Q0VAK6 560 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 ARID5BQ14865 1188 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
PHTF1-205ENST00000393357 STK31Q9BXU1 1019 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 ZNF853P0CG23 659 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
PHTF1-205ENST00000393357 FILIP1Q7Z7B0 1213 aa19.59■□□□□ 0.73
PHTF1-205ENST00000393357 FANCAO15360 1455 aa19.58■□□□□ 0.72
PHTF1-205ENST00000393357 ARAP3Q8WWN8 1544 aa19.58■□□□□ 0.72
PHTF1-205ENST00000393357 NUTM2GQ5VZR2 741 aa19.58■□□□□ 0.72
PHTF1-205ENST00000393357 LRRC7Q96NW7 1537 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 TULP4Q9NRJ4 1543 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 LIG1P18858 919 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 KIAA1524Q8TCG1 905 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 NAP1L2Q9ULW6 460 aaPredicted RBP19.57■□□□□ 0.72
PHTF1-205ENST00000393357 UBE2HP62256 183 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 COL9A3Q14050 684 aaPredicted RBP19.57■□□□□ 0.72
PHTF1-205ENST00000393357 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 ST7Q9NRC1 585 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 F13A1P00488 732 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 MCM2P49736 904 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
PHTF1-205ENST00000393357 ADGRL1O94910 1474 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 CDK11BP21127 795 aaKnown RBP19.56■□□□□ 0.72
PHTF1-205ENST00000393357 CUL4AQ13619 759 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 RUFY3Q7L099 469 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 NPATQ14207 1427 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 TCHHQ07283 1943 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 ADCK5Q3MIX3 580 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 ANO6Q4KMQ2 910 aa19.56■□□□□ 0.72
PHTF1-205ENST00000393357 QRICH2Q9H0J4 1663 aa19.55■□□□□ 0.72
PHTF1-205ENST00000393357 MED14O60244 1454 aa19.55■□□□□ 0.72
PHTF1-205ENST00000393357 BICD2Q8TD16 824 aa19.55■□□□□ 0.72
PHTF1-205ENST00000393357 ATP10DQ9P241 1426 aa19.55■□□□□ 0.72
PHTF1-205ENST00000393357 RIMS2Q9UQ26 1411 aa19.55■□□□□ 0.72
PHTF1-205ENST00000393357 DACT1Q9NYF0 836 aa19.55■□□□□ 0.72
PHTF1-205ENST00000393357 GOLGA6L6A8MZA4 724 aa19.54■□□□□ 0.72
PHTF1-205ENST00000393357 CCDC192P0DO97 292 aa19.54■□□□□ 0.72
PHTF1-205ENST00000393357 GORABQ5T7V8 394 aa19.54■□□□□ 0.72
PHTF1-205ENST00000393357 DNAJC25Q9H1X3 360 aa19.54■□□□□ 0.72
PHTF1-205ENST00000393357 SNX14Q9Y5W7 946 aa19.54■□□□□ 0.72
PHTF1-205ENST00000393357 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
PHTF1-205ENST00000393357 TNMDQ9H2S6 317 aa19.53■□□□□ 0.72
PHTF1-205ENST00000393357 BRPF1P55201 1214 aaPredicted RBP19.53■□□□□ 0.72
PHTF1-205ENST00000393357 NCBP1Q09161 790 aaKnown RBP19.53■□□□□ 0.72
PHTF1-205ENST00000393357 CCDC112Q8NEF3 446 aa19.53■□□□□ 0.72
PHTF1-205ENST00000393357 MYOM2P54296 1465 aa19.52■□□□□ 0.72
PHTF1-205ENST00000393357 SRGAP3O43295 1099 aa19.52■□□□□ 0.72
PHTF1-205ENST00000393357 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms