RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
CALD1-203ENST00000393118 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
CALD1-203ENST00000393118 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 KIAA1210Q9ULL0 1709 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 HOXC9P31274 260 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
CALD1-203ENST00000393118 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 ABCC4O15439 1325 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 PDE1AP54750 535 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
CALD1-203ENST00000393118 FRMPD1Q5SYB0 1578 aa12.75□□□□□ -0.37
CALD1-203ENST00000393118 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 RUFY2Q8WXA3 655 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
CALD1-203ENST00000393118 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.74□□□□□ -0.37
CALD1-203ENST00000393118 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 PTPRMP28827 1452 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 KCNH5Q8NCM2 988 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 ATP7BP35670 1465 aa12.74□□□□□ -0.37
CALD1-203ENST00000393118 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
CALD1-203ENST00000393118 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
CALD1-203ENST00000393118 CLCN1P35523 988 aa12.73□□□□□ -0.37
CALD1-203ENST00000393118 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
CALD1-203ENST00000393118 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
CALD1-203ENST00000393118 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
CALD1-203ENST00000393118 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
CALD1-203ENST00000393118 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
CALD1-203ENST00000393118 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
CALD1-203ENST00000393118 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
CALD1-203ENST00000393118 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
CALD1-203ENST00000393118 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
CALD1-203ENST00000393118 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
CALD1-203ENST00000393118 RBM25P49756 843 aaKnown RBP12.72□□□□□ -0.37
CALD1-203ENST00000393118 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
CALD1-203ENST00000393118 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
CALD1-203ENST00000393118 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
CALD1-203ENST00000393118 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
CALD1-203ENST00000393118 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
CALD1-203ENST00000393118 AACSQ86V21 672 aa12.71□□□□□ -0.37
CALD1-203ENST00000393118 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
CALD1-203ENST00000393118 PIK3C2BO00750 1634 aa12.71□□□□□ -0.37
CALD1-203ENST00000393118 SNX21Q969T3 373 aa12.71□□□□□ -0.38
CALD1-203ENST00000393118 MYOM1P52179 1685 aa12.71□□□□□ -0.38
CALD1-203ENST00000393118 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.38
CALD1-203ENST00000393118 SIRT1Q96EB6 747 aa12.71□□□□□ -0.38
CALD1-203ENST00000393118 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.38
CALD1-203ENST00000393118 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 NEUROD6Q96NK8 337 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 MAP7D2Q96T17 732 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 SBNO1A3KN83 1393 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 IQSEC2Q5JU85 1478 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 ARHGEF40Q8TER5 1519 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
CALD1-203ENST00000393118 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
CALD1-203ENST00000393118 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
CALD1-203ENST00000393118 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 MAP3K2Q9Y2U5 619 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 EVA1CP58658 441 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 ZNF771Q7L3S4 317 aaPredicted RBP12.69□□□□□ -0.38
CALD1-203ENST00000393118 LRRC7Q96NW7 1537 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
CALD1-203ENST00000393118 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
CALD1-203ENST00000393118 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
CALD1-203ENST00000393118 ZGPATQ8N5A5 531 aaKnown RBP12.68□□□□□ -0.38
CALD1-203ENST00000393118 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 USP26Q9BXU7 913 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 MCM2P49736 904 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 DNAJC2Q99543 621 aaKnown RBP12.68□□□□□ -0.38
CALD1-203ENST00000393118 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
CALD1-203ENST00000393118 PIP4K2AP48426 406 aaPredicted RBP12.68□□□□□ -0.38
CALD1-203ENST00000393118 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
CALD1-203ENST00000393118 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 CHRNA2Q15822 529 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 NBPF6Q5VWK0 638 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 NBPF4Q96M43 638 aa12.68□□□□□ -0.38
CALD1-203ENST00000393118 PPLO60437 1756 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
CALD1-203ENST00000393118 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 USP6P35125 1406 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 FIBPO43427 364 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 FOSBP53539 338 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 ANTXR1Q9H6X2 564 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
CALD1-203ENST00000393118 UQCRHLA0A096LP55 91 aa12.66□□□□□ -0.38
CALD1-203ENST00000393118 GCP02774 474 aa12.66□□□□□ -0.38
CALD1-203ENST00000393118 UQCRHP07919 91 aa12.66□□□□□ -0.38
CALD1-203ENST00000393118 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
CALD1-203ENST00000393118 PA2G4Q9UQ80 394 aaKnown RBP12.66□□□□□ -0.38
CALD1-203ENST00000393118 ZC3H13Q5T200 1668 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms