RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
BRF1-204ENST00000392557 C16orf71Q8IYS4 520 aaPredicted RBP13.32□□□□□ -0.28
BRF1-204ENST00000392557 XRN1Q8IZH2 1706 aaKnown RBP13.32□□□□□ -0.28
BRF1-204ENST00000392557 RAB3GAP1Q15042 981 aa13.32□□□□□ -0.28
BRF1-204ENST00000392557 SNX21Q969T3 373 aa13.32□□□□□ -0.28
BRF1-204ENST00000392557 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
BRF1-204ENST00000392557 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
BRF1-204ENST00000392557 FKBP5Q13451 457 aaPredicted RBP13.31□□□□□ -0.28
BRF1-204ENST00000392557 ABCC4O15439 1325 aa13.31□□□□□ -0.28
BRF1-204ENST00000392557 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
BRF1-204ENST00000392557 PTMSP20962 102 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 KRT28Q7Z3Y7 464 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 GCP02774 474 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 ATF3P18847 181 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
BRF1-204ENST00000392557 MEIS3Q99687 375 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
BRF1-204ENST00000392557 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 IP6K1Q92551 441 aa13.3□□□□□ -0.28
BRF1-204ENST00000392557 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
BRF1-204ENST00000392557 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
BRF1-204ENST00000392557 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
BRF1-204ENST00000392557 BAG4O95429 457 aaKnown RBP13.29□□□□□ -0.28
BRF1-204ENST00000392557 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
BRF1-204ENST00000392557 KCNH5Q8NCM2 988 aa13.29□□□□□ -0.28
BRF1-204ENST00000392557 LGR6Q9HBX8 967 aa13.29□□□□□ -0.28
BRF1-204ENST00000392557 DTNBO60941 627 aa13.28□□□□□ -0.28
BRF1-204ENST00000392557 CRB1P82279 1406 aa13.28□□□□□ -0.28
BRF1-204ENST00000392557 ST18O60284 1047 aa13.28□□□□□ -0.28
BRF1-204ENST00000392557 MSH6P52701 1360 aa13.28□□□□□ -0.28
BRF1-204ENST00000392557 NALCNQ8IZF0 1738 aa13.28□□□□□ -0.28
BRF1-204ENST00000392557 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
BRF1-204ENST00000392557 KDRP35968 1356 aa13.27□□□□□ -0.28
BRF1-204ENST00000392557 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.28
BRF1-204ENST00000392557 TEFQ10587 303 aa13.27□□□□□ -0.28
BRF1-204ENST00000392557 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.28
BRF1-204ENST00000392557 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
BRF1-204ENST00000392557 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.29
BRF1-204ENST00000392557 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
BRF1-204ENST00000392557 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
BRF1-204ENST00000392557 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.29
BRF1-204ENST00000392557 RNF214Q8ND24 703 aa13.27□□□□□ -0.29
BRF1-204ENST00000392557 OTUD7AQ8TE49 926 aaPredicted RBP13.27□□□□□ -0.29
BRF1-204ENST00000392557 RABEP1Q15276 862 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 TSHZ3Q63HK5 1081 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 ANXA1P04083 346 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
BRF1-204ENST00000392557 CCDC173Q0VFZ6 552 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 CCDC30Q5VVM6 783 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
BRF1-204ENST00000392557 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
BRF1-204ENST00000392557 NUCB2P80303 420 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 PKP1Q13835 747 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 CHAMP1Q96JM3 812 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 KIF2CQ99661 725 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
BRF1-204ENST00000392557 FLIIQ13045 1269 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
BRF1-204ENST00000392557 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
BRF1-204ENST00000392557 PTPRCP08575 1304 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 KCNQ3O43525 872 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 GSPT1P15170 499 aaKnown RBP13.24□□□□□ -0.29
BRF1-204ENST00000392557 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 CHRNA2Q15822 529 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
BRF1-204ENST00000392557 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
BRF1-204ENST00000392557 MPNDQ8N594 471 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 RILPL2Q969X0 211 aa13.24□□□□□ -0.29
BRF1-204ENST00000392557 NEK4P51957 841 aa13.23□□□□□ -0.29
BRF1-204ENST00000392557 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
BRF1-204ENST00000392557 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
BRF1-204ENST00000392557 PLCB2Q00722 1185 aa13.23□□□□□ -0.29
BRF1-204ENST00000392557 KLHL40Q2TBA0 621 aa13.23□□□□□ -0.29
BRF1-204ENST00000392557 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
BRF1-204ENST00000392557 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
BRF1-204ENST00000392557 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 CEP85Q6P2H3 762 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
BRF1-204ENST00000392557 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 ARHGEF25Q86VW2 580 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 ZSCAN30Q86W11 494 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
BRF1-204ENST00000392557 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
BRF1-204ENST00000392557 RGPD1P0DJD0 1748 aa13.21□□□□□ -0.29
BRF1-204ENST00000392557 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
BRF1-204ENST00000392557 REC8O95072 547 aa13.21□□□□□ -0.29
BRF1-204ENST00000392557 SDSP20132 328 aa13.21□□□□□ -0.29
BRF1-204ENST00000392557 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.29
BRF1-204ENST00000392557 ANKRD44Q8N8A2 993 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms