RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 BIN1O00499 593 aa20.08■□□□□ 0.81
TRAF3IP1-202ENST00000391993 GNAI2P04899 355 aa20.08■□□□□ 0.81
TRAF3IP1-202ENST00000391993 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ARHGAP29Q52LW3 1261 aa20.08■□□□□ 0.81
TRAF3IP1-202ENST00000391993 PIK3C2GO75747 1445 aa20.08■□□□□ 0.81
TRAF3IP1-202ENST00000391993 PDE1AP54750 535 aa20.08■□□□□ 0.81
TRAF3IP1-202ENST00000391993 BRD1O95696 1058 aa20.08■□□□□ 0.8
TRAF3IP1-202ENST00000391993 ME1P48163 572 aa20.08■□□□□ 0.8
TRAF3IP1-202ENST00000391993 USP16Q9Y5T5 823 aa20.08■□□□□ 0.8
TRAF3IP1-202ENST00000391993 GTF2A1P52655 376 aaPredicted RBP20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 HSP90B2PQ58FF3 399 aa20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 AK7Q96M32 723 aa20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 GABPB1Q06547 395 aaPredicted RBP20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 RSPH14Q9UHP6 348 aa20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 PTPRGP23470 1445 aa20.07■□□□□ 0.8
TRAF3IP1-202ENST00000391993 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SNW1Q13573 536 aaKnown RBP20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 LIMCH1Q9UPQ0 1083 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SYT10Q6XYQ8 523 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 KIAA1524Q8TCG1 905 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 ESYT1Q9BSJ8 1104 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 KRBA2Q6ZNG9 492 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 CABP1Q9NZU7 370 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 DNAI1Q9UI46 699 aa20.06■□□□□ 0.8
TRAF3IP1-202ENST00000391993 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 UBTFL1P0CB47 393 aaPredicted RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 TRIM35Q9UPQ4 493 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 IRX5P78411 483 aaPredicted RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 CCDC102AQ96A19 550 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 F13A1P00488 732 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 NCBP1Q09161 790 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 HSP90AA4PQ58FG1 418 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 VAMP4O75379 141 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 ERCC6LQ2NKX8 1250 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 MRPL50Q8N5N7 158 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 ERCC4Q92889 916 aaPredicted RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 DCTPP1Q9H773 170 aa20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 LRRFIP2Q9Y608 721 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-202ENST00000391993 KIF14Q15058 1648 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SLU7O95391 586 aaKnown RBP20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 CNTROBQ8N137 903 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 PHACTR2O75167 634 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SULT6B1Q6IMI4 303 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SIL1Q9H173 461 aa20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 IBTKQ9P2D0 1353 aaPredicted RBP20.04■□□□□ 0.8
TRAF3IP1-202ENST00000391993 A0A087WWV3 80 aa20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SFPQP23246 707 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 AK9Q5TCS8 1911 aa20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 PES1O00541 588 aaKnown RBP20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 TMC6Q7Z403 805 aa20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 MCM6Q14566 821 aa20.03■□□□□ 0.8
TRAF3IP1-202ENST00000391993 CCDC69A6NI79 296 aa20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 AK2P54819 239 aa20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 GPATCH3Q96I76 525 aa20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 DEF6Q9H4E7 631 aa20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 EMILIN1Q9Y6C2 1016 aa20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 TAF7LQ5H9L4 462 aa20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 POLR3AO14802 1390 aaPredicted RBP20.02■□□□□ 0.8
TRAF3IP1-202ENST00000391993 SERPINC1P01008 464 aa20.02■□□□□ 0.79
TRAF3IP1-202ENST00000391993 TMEM51Q9NW97 253 aa20.02■□□□□ 0.79
TRAF3IP1-202ENST00000391993 PDCP20941 246 aa20.01■□□□□ 0.79
TRAF3IP1-202ENST00000391993 FAM193AP78312 1265 aa20.01■□□□□ 0.79
TRAF3IP1-202ENST00000391993 SIRT2Q8IXJ6 389 aa20.01■□□□□ 0.79
TRAF3IP1-202ENST00000391993 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
TRAF3IP1-202ENST00000391993 SRRTQ9BXP5 876 aaKnown RBP20.01■□□□□ 0.79
TRAF3IP1-202ENST00000391993 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
TRAF3IP1-202ENST00000391993 RAB11FIP3O75154 756 aa20■□□□□ 0.79
TRAF3IP1-202ENST00000391993 COG3Q96JB2 828 aa20■□□□□ 0.79
TRAF3IP1-202ENST00000391993 H0YHG0 523 aa20■□□□□ 0.79
TRAF3IP1-202ENST00000391993 FCHSD2O94868 740 aa20■□□□□ 0.79
TRAF3IP1-202ENST00000391993 CBX8Q9HC52 389 aa20■□□□□ 0.79
TRAF3IP1-202ENST00000391993 GPATCH8Q9UKJ3 1502 aaKnown RBP20■□□□□ 0.79
TRAF3IP1-202ENST00000391993 DDIT3P35638 169 aa19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 ANKRD44Q8N8A2 993 aa19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 RASSF4Q9H2L5 321 aa19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 PATL2C9JE40 543 aaKnown RBP19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 RNF216Q9NWF9 866 aaPredicted RBP19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 ABCC11Q96J66 1382 aa19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 TERF2Q15554 542 aa19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 NAT10Q9H0A0 1025 aaKnown RBP19.99■□□□□ 0.79
TRAF3IP1-202ENST00000391993 ARID5BQ14865 1188 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 CEP57L1Q8IYX8 460 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 SRGAP3O43295 1099 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 BRPF1P55201 1214 aaPredicted RBP19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 CEP85Q6P2H3 762 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 TSPYL1Q9H0U9 437 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 LIG1P18858 919 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 HNRNPH2P55795 449 aaKnown RBP19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 ZSCAN25Q6NSZ9 544 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 FSD1Q9BTV5 496 aa19.98■□□□□ 0.79
TRAF3IP1-202ENST00000391993 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
TRAF3IP1-202ENST00000391993 C9orf78Q9NZ63 289 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms