RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
MRPL55-219ENST00000391867 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
MRPL55-219ENST00000391867 ITPK1Q13572 414 aa17.52■□□□□ 0.4
MRPL55-219ENST00000391867 SMIM5Q71RC9 77 aa17.52■□□□□ 0.4
MRPL55-219ENST00000391867 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
MRPL55-219ENST00000391867 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
MRPL55-219ENST00000391867 LINC00116Q8NCU8 138 aa17.51■□□□□ 0.39
MRPL55-219ENST00000391867 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
MRPL55-219ENST00000391867 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
MRPL55-219ENST00000391867 SLC52A2Q9HAB3 445 aa17.51■□□□□ 0.39
MRPL55-219ENST00000391867 VIRMAQ69YN4 1812 aaKnown RBP17.51■□□□□ 0.39
MRPL55-219ENST00000391867 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
MRPL55-219ENST00000391867 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
MRPL55-219ENST00000391867 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-219ENST00000391867 MSH5O43196 834 aa17.5■□□□□ 0.39
MRPL55-219ENST00000391867 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
MRPL55-219ENST00000391867 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
MRPL55-219ENST00000391867 MRC1P22897 1456 aa17.5■□□□□ 0.39
MRPL55-219ENST00000391867 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
MRPL55-219ENST00000391867 FCHSD2O94868 740 aa17.49■□□□□ 0.39
MRPL55-219ENST00000391867 SLC39A6Q13433 755 aa17.49■□□□□ 0.39
MRPL55-219ENST00000391867 AK7Q96M32 723 aa17.49■□□□□ 0.39
MRPL55-219ENST00000391867 PPP1R1BQ9UD71 204 aaPredicted RBP17.49■□□□□ 0.39
MRPL55-219ENST00000391867 SRCAPQ6ZRS2 3230 aa17.49■□□□□ 0.39
MRPL55-219ENST00000391867 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
MRPL55-219ENST00000391867 QSER1Q2KHR3 1735 aa17.48■□□□□ 0.39
MRPL55-219ENST00000391867 PHF14O94880 888 aa17.48■□□□□ 0.39
MRPL55-219ENST00000391867 COL23A1Q86Y22 540 aaPredicted RBP17.48■□□□□ 0.39
MRPL55-219ENST00000391867 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
MRPL55-219ENST00000391867 MTFR1LQ9H019 292 aa17.48■□□□□ 0.39
MRPL55-219ENST00000391867 PTGER2P43116 358 aa17.47■□□□□ 0.39
MRPL55-219ENST00000391867 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
MRPL55-219ENST00000391867 GNPATO15228 680 aa17.45■□□□□ 0.38
MRPL55-219ENST00000391867 MSL1Q68DK7 614 aa17.45■□□□□ 0.38
MRPL55-219ENST00000391867 TEFQ10587 303 aa17.44■□□□□ 0.38
MRPL55-219ENST00000391867 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
MRPL55-219ENST00000391867 MCM10Q7L590 875 aa17.44■□□□□ 0.38
MRPL55-219ENST00000391867 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
MRPL55-219ENST00000391867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
MRPL55-219ENST00000391867 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
MRPL55-219ENST00000391867 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
MRPL55-219ENST00000391867 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
MRPL55-219ENST00000391867 TJP1Q07157 1748 aa17.42■□□□□ 0.38
MRPL55-219ENST00000391867 NEFMP07197 916 aa17.42■□□□□ 0.38
MRPL55-219ENST00000391867 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
MRPL55-219ENST00000391867 CEMIPQ8WUJ3 1361 aa17.41■□□□□ 0.38
MRPL55-219ENST00000391867 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
MRPL55-219ENST00000391867 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
MRPL55-219ENST00000391867 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
MRPL55-219ENST00000391867 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
MRPL55-219ENST00000391867 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
MRPL55-219ENST00000391867 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
MRPL55-219ENST00000391867 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-219ENST00000391867 KCNQ3O43525 872 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 SSFA2P28290 1259 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 CRKLP46109 303 aaKnown RBP17.39■□□□□ 0.37
MRPL55-219ENST00000391867 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 FLAD1Q8NFF5 587 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 ARXQ96QS3 562 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
MRPL55-219ENST00000391867 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
MRPL55-219ENST00000391867 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
MRPL55-219ENST00000391867 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
MRPL55-219ENST00000391867 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-219ENST00000391867 RTCBQ9Y3I0 505 aaKnown RBP17.38■□□□□ 0.37
MRPL55-219ENST00000391867 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
MRPL55-219ENST00000391867 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
MRPL55-219ENST00000391867 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
MRPL55-219ENST00000391867 POLD1P28340 1107 aa17.37■□□□□ 0.37
MRPL55-219ENST00000391867 NFE2L2Q16236 605 aa17.37■□□□□ 0.37
MRPL55-219ENST00000391867 ZNF790Q6PG37 636 aa17.37■□□□□ 0.37
MRPL55-219ENST00000391867 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-219ENST00000391867 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
MRPL55-219ENST00000391867 RC3H1Q5TC82 1133 aaKnown RBP17.36■□□□□ 0.37
MRPL55-219ENST00000391867 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
MRPL55-219ENST00000391867 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
MRPL55-219ENST00000391867 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-219ENST00000391867 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
MRPL55-219ENST00000391867 CYP19A1P11511 503 aaPredicted RBP17.35■□□□□ 0.37
MRPL55-219ENST00000391867 INTS5Q6P9B9 1019 aaKnown RBP17.35■□□□□ 0.37
MRPL55-219ENST00000391867 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
MRPL55-219ENST00000391867 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
MRPL55-219ENST00000391867 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
MRPL55-219ENST00000391867 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
MRPL55-219ENST00000391867 TRAPPC3LQ5T215 181 aa17.34■□□□□ 0.37
MRPL55-219ENST00000391867 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
MRPL55-219ENST00000391867 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
MRPL55-219ENST00000391867 HEG1Q9ULI3 1381 aa17.33■□□□□ 0.36
MRPL55-219ENST00000391867 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
MRPL55-219ENST00000391867 SYT17Q9BSW7 474 aa17.33■□□□□ 0.36
MRPL55-219ENST00000391867 RIPK4P57078 832 aa17.32■□□□□ 0.36
MRPL55-219ENST00000391867 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
MRPL55-219ENST00000391867 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
MRPL55-219ENST00000391867 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
MRPL55-219ENST00000391867 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
MRPL55-219ENST00000391867 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
MRPL55-219ENST00000391867 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
MRPL55-219ENST00000391867 ANP32CO43423 234 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms