RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 SLC52A2Q9HAB3 445 aa29.37■■■□□ 2.29
IGHV3-20-201ENST00000390606 LRP5O75197 1615 aa29.36■■■□□ 2.29
IGHV3-20-201ENST00000390606 GNAT3A8MTJ3 354 aa29.36■■■□□ 2.29
IGHV3-20-201ENST00000390606 IL17REQ8NFR9 667 aa29.34■■■□□ 2.29
IGHV3-20-201ENST00000390606 PLEKHF1Q96S99 279 aa29.34■■■□□ 2.29
IGHV3-20-201ENST00000390606 C5P01031 1676 aa29.34■■■□□ 2.29
IGHV3-20-201ENST00000390606 TAF1LQ8IZX4 1826 aa29.34■■■□□ 2.29
IGHV3-20-201ENST00000390606 SLC4A9Q96Q91 983 aa29.33■■■□□ 2.29
IGHV3-20-201ENST00000390606 VIRMAQ69YN4 1812 aaKnown RBP29.33■■■□□ 2.29
IGHV3-20-201ENST00000390606 ITPK1Q13572 414 aa29.32■■■□□ 2.28
IGHV3-20-201ENST00000390606 HMGB2P26583 209 aaKnown RBP29.31■■■□□ 2.28
IGHV3-20-201ENST00000390606 SRCAPQ6ZRS2 3230 aa29.31■■■□□ 2.28
IGHV3-20-201ENST00000390606 PNPLA7Q6ZV29 1317 aa29.3■■■□□ 2.28
IGHV3-20-201ENST00000390606 ATP6V1AP38606 617 aa29.3■■■□□ 2.28
IGHV3-20-201ENST00000390606 LINC00116Q8NCU8 138 aa29.3■■■□□ 2.28
IGHV3-20-201ENST00000390606 TFCP2L1Q9NZI6 479 aa29.3■■■□□ 2.28
IGHV3-20-201ENST00000390606 QSER1Q2KHR3 1735 aa29.3■■■□□ 2.28
IGHV3-20-201ENST00000390606 CEMIPQ8WUJ3 1361 aa29.29■■■□□ 2.28
IGHV3-20-201ENST00000390606 RBM42Q9BTD8 480 aaKnown RBP29.29■■■□□ 2.28
IGHV3-20-201ENST00000390606 TUBGCP6Q96RT7 1819 aa29.29■■■□□ 2.28
IGHV3-20-201ENST00000390606 C4BP0C0L5 1744 aa29.28■■■□□ 2.28
IGHV3-20-201ENST00000390606 ZNF831Q5JPB2 1677 aa29.27■■■□□ 2.28
IGHV3-20-201ENST00000390606 ZBTB7AO95365 584 aa29.26■■■□□ 2.27
IGHV3-20-201ENST00000390606 SPON1Q9HCB6 807 aa29.26■■■□□ 2.27
IGHV3-20-201ENST00000390606 PTCD1O75127 700 aaKnown RBP29.25■■■□□ 2.27
IGHV3-20-201ENST00000390606 SLC39A6Q13433 755 aa29.25■■■□□ 2.27
IGHV3-20-201ENST00000390606 PNNQ9H307 717 aaKnown RBP29.25■■■□□ 2.27
IGHV3-20-201ENST00000390606 NEFMP07197 916 aa29.24■■■□□ 2.27
IGHV3-20-201ENST00000390606 TEFQ10587 303 aa29.23■■■□□ 2.27
IGHV3-20-201ENST00000390606 AMIGO3Q86WK7 504 aa29.23■■■□□ 2.27
IGHV3-20-201ENST00000390606 MTFR1LQ9H019 292 aa29.23■■■□□ 2.27
IGHV3-20-201ENST00000390606 HTATSF1O43719 755 aaKnown RBP29.22■■■□□ 2.27
IGHV3-20-201ENST00000390606 COL23A1Q86Y22 540 aaPredicted RBP29.22■■■□□ 2.27
IGHV3-20-201ENST00000390606 AK7Q96M32 723 aa29.22■■■□□ 2.27
IGHV3-20-201ENST00000390606 NFE2L2Q16236 605 aa29.21■■■□□ 2.27
IGHV3-20-201ENST00000390606 MCM10Q7L590 875 aa29.21■■■□□ 2.27
IGHV3-20-201ENST00000390606 ATF5Q9Y2D1 282 aaPredicted RBP29.21■■■□□ 2.27
IGHV3-20-201ENST00000390606 SIPA1L3O60292 1781 aaPredicted RBP29.21■■■□□ 2.27
IGHV3-20-201ENST00000390606 KCPQ6ZWJ8 1503 aa29.2■■■□□ 2.27
IGHV3-20-201ENST00000390606 DCTN1Q14203 1278 aa29.2■■■□□ 2.26
IGHV3-20-201ENST00000390606 SLC16A10Q8TF71 515 aa29.2■■■□□ 2.26
IGHV3-20-201ENST00000390606 RTF1Q92541 710 aaKnown RBP29.2■■■□□ 2.26
IGHV3-20-201ENST00000390606 MAPK8IP3Q9UPT6 1336 aa29.2■■■□□ 2.26
IGHV3-20-201ENST00000390606 PTGER2P43116 358 aa29.19■■■□□ 2.26
IGHV3-20-201ENST00000390606 COL5A3P25940 1745 aaPredicted RBP29.18■■■□□ 2.26
IGHV3-20-201ENST00000390606 WDR43Q15061 677 aaKnown RBP eCLIP29.18■■■□□ 2.26
IGHV3-20-201ENST00000390606 SGIP1Q9BQI5 828 aa29.18■■■□□ 2.26
IGHV3-20-201ENST00000390606 ADAMTS8Q9UP79 889 aa29.18■■■□□ 2.26
IGHV3-20-201ENST00000390606 CICQ96RK0 1608 aaPredicted RBP29.18■■■□□ 2.26
IGHV3-20-201ENST00000390606 UBR3Q6ZT12 1888 aa29.18■■■□□ 2.26
IGHV3-20-201ENST00000390606 CCDC184Q52MB2 194 aa29.17■■■□□ 2.26
IGHV3-20-201ENST00000390606 RC3H1Q5TC82 1133 aaKnown RBP29.17■■■□□ 2.26
IGHV3-20-201ENST00000390606 SMIM5Q71RC9 77 aa29.17■■■□□ 2.26
IGHV3-20-201ENST00000390606 FLAD1Q8NFF5 587 aa29.17■■■□□ 2.26
IGHV3-20-201ENST00000390606 CNTNAP4Q9C0A0 1308 aa29.17■■■□□ 2.26
IGHV3-20-201ENST00000390606 ANP32CO43423 234 aa29.16■■■□□ 2.26
IGHV3-20-201ENST00000390606 TJP1Q07157 1748 aa29.16■■■□□ 2.26
IGHV3-20-201ENST00000390606 DLG5Q8TDM6 1919 aa29.16■■■□□ 2.26
IGHV3-20-201ENST00000390606 GNPATO15228 680 aa29.15■■■□□ 2.26
IGHV3-20-201ENST00000390606 ZNF790Q6PG37 636 aa29.15■■■□□ 2.26
IGHV3-20-201ENST00000390606 UBR2Q8IWV8 1755 aa29.15■■■□□ 2.26
IGHV3-20-201ENST00000390606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.14■■■□□ 2.26
IGHV3-20-201ENST00000390606 SSFA2P28290 1259 aa29.14■■■□□ 2.26
IGHV3-20-201ENST00000390606 DNAJC10Q8IXB1 793 aa29.14■■■□□ 2.26
IGHV3-20-201ENST00000390606 CCDC146Q8IYE0 955 aa29.14■■■□□ 2.26
IGHV3-20-201ENST00000390606 TTC5Q8N0Z6 440 aa29.13■■■□□ 2.25
IGHV3-20-201ENST00000390606 MYH14Q7Z406 1995 aaKnown RBP29.12■■■□□ 2.25
IGHV3-20-201ENST00000390606 BTBD11A6QL63 1104 aa29.12■■■□□ 2.25
IGHV3-20-201ENST00000390606 PHF14O94880 888 aa29.12■■■□□ 2.25
IGHV3-20-201ENST00000390606 ZNF496Q96IT1 587 aaPredicted RBP29.12■■■□□ 2.25
IGHV3-20-201ENST00000390606 MSH5O43196 834 aa29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 KCNQ3O43525 872 aa29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 TMPOP42166 694 aaKnown RBP29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 CRKLP46109 303 aaKnown RBP29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 VSIG10Q8N0Z9 540 aa29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 RUNDC1Q96C34 613 aa29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 COL24A1Q17RW2 1714 aa29.11■■■□□ 2.25
IGHV3-20-201ENST00000390606 RPS6KA4O75676 772 aa29.09■■■□□ 2.25
IGHV3-20-201ENST00000390606 THUMPD2Q9BTF0 503 aaKnown RBP29.09■■■□□ 2.25
IGHV3-20-201ENST00000390606 RTCBQ9Y3I0 505 aaKnown RBP29.09■■■□□ 2.25
IGHV3-20-201ENST00000390606 CYP19A1P11511 503 aaPredicted RBP29.08■■■□□ 2.25
IGHV3-20-201ENST00000390606 RIPK4P57078 832 aa29.08■■■□□ 2.25
IGHV3-20-201ENST00000390606 TAF7Q15545 349 aaPredicted RBP29.08■■■□□ 2.25
IGHV3-20-201ENST00000390606 INTS5Q6P9B9 1019 aaKnown RBP29.08■■■□□ 2.25
IGHV3-20-201ENST00000390606 PPP1R1BQ9UD71 204 aaPredicted RBP29.08■■■□□ 2.25
IGHV3-20-201ENST00000390606 HEG1Q9ULI3 1381 aa29.08■■■□□ 2.25
IGHV3-20-201ENST00000390606 FMNL2Q96PY5 1086 aa29.05■■■□□ 2.24
IGHV3-20-201ENST00000390606 RRP7AQ9Y3A4 280 aaKnown RBP29.05■■■□□ 2.24
IGHV3-20-201ENST00000390606 ADRA2BP18089 450 aa29.04■■■□□ 2.24
IGHV3-20-201ENST00000390606 TRAPPC3LQ5T215 181 aa29.04■■■□□ 2.24
IGHV3-20-201ENST00000390606 MSL1Q68DK7 614 aa29.04■■■□□ 2.24
IGHV3-20-201ENST00000390606 CCDC87Q9NVE4 849 aa29.04■■■□□ 2.24
IGHV3-20-201ENST00000390606 ARHGEF1Q92888 912 aaKnown RBP29.03■■■□□ 2.24
IGHV3-20-201ENST00000390606 ARXQ96QS3 562 aa29.02■■■□□ 2.24
IGHV3-20-201ENST00000390606 MIS18AQ9NYP9 233 aa29.02■■■□□ 2.24
IGHV3-20-201ENST00000390606 POLD1P28340 1107 aa29.01■■■□□ 2.23
IGHV3-20-201ENST00000390606 LMOD3Q0VAK6 560 aa29.01■■■□□ 2.23
IGHV3-20-201ENST00000390606 PNISRQ8TF01 805 aaKnown RBP29.01■■■□□ 2.23
IGHV3-20-201ENST00000390606 MRS2Q9HD23 443 aa29.01■■■□□ 2.23
IGHV3-20-201ENST00000390606 NEUROD2Q15784 382 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms