RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 IGSF3O75054 1194 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 BRD1O95696 1058 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 HMGB1P09429 215 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CCDC192P0DO97 292 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 ZKSCAN1P17029 563 aaPredicted RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CDC25BP30305 580 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 RIPK4P57078 832 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 GSDMDP57764 484 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 TPM4P67936 248 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CNGB1Q14028 1251 aaPredicted RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 TWISTNBQ3B726 338 aaPredicted RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 ZSCAN23Q3MJ62 389 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 TUBB8Q3ZCM7 444 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CT47A1Q5JQC4 288 aaPredicted RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CFAP70Q5T0N1 1121 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CTR9Q6PD62 1173 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 TBC1D9Q6ZT07 1266 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CNTROBQ8N137 903 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 MSL3Q8N5Y2 521 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CCDC112Q8NEF3 446 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 FAM200AQ8TCP9 573 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 PANK1Q8TE04 598 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 SSH1Q8WYL5 1049 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 RTF1Q92541 710 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 DDX11Q96FC9 970 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 COG3Q96JB2 828 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 TACO1Q9BSH4 297 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CARD14Q9BXL6 1004 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 STK31Q9BXU1 1019 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 NAT10Q9H0A0 1025 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 ALDH8A1Q9H2A2 487 aaPredicted RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 TSPY26PQ9H489 355 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 ARGLU1Q9NWB6 273 aaPredicted RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CGNQ9P2M7 1197 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 STAP2Q9UGK3 403 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CCDC61Q9Y6R9 512 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 CHD2O14647 1828 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 ADGRF5Q8IZF2 1346 aa2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 USP42Q9H9J4 1324 aaKnown RBP2.39□□□□□ -2.03
TRAJ49-201ENST00000390488 ABCC12Q96J65 1359 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 UQCRHLA0A096LP55 91 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 SETD1AO15047 1707 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 VAMP4O75379 141 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 GLRX3O76003 335 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 GNAI2P04899 355 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 PTMAP06454 111 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 UQCRHP07919 91 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 RGPD1P0DJD0 1748 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 MX1P20591 662 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 HOXA7P31268 230 aaPredicted RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 SRPK2P78362 688 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 KRT85P78386 507 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 EXOSC9Q06265 439 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 GPS2Q13227 327 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 SEMA3FQ13275 785 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 MTX1Q13505 466 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 TUBB2AQ13885 445 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 MED1Q15648 1581 aaPredicted RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 VPS53Q5VIR6 699 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 CCDC30Q5VVM6 783 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 JAKMIP3Q5VZ66 844 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 SARM1Q6SZW1 724 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 FCHSD1Q86WN1 690 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 CCDC146Q8IYE0 955 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 TMEM57Q8N5G2 664 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 MRPL50Q8N5N7 158 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 CCDC150Q8NCX0 1101 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 KIF1BPQ96EK5 621 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 LLPHQ9BRT6 129 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 TUBB2BQ9BVA1 445 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 UTP14AQ9BVJ6 771 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 USP26Q9BXU7 913 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 LRRCC1Q9C099 1032 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 FAM107BQ9H098 131 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 ZSCAN16Q9H4T2 348 aaPredicted RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 ANO8Q9HCE9 1232 aaPredicted RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 RRAGDQ9NQL2 400 aaPredicted RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 SNRKQ9NRH2 765 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 IMPACTQ9P2X3 320 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 CFAP45Q9UL16 551 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 NOB1Q9ULX3 412 aaKnown RBP2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 TRIM35Q9UPQ4 493 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 CRYBG1Q9Y4K1 1723 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 AKAP12Q02952 1782 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 RIMBP3CA6NJZ7 1639 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 RIMBP3BA6NNM3 1639 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 RIMBP3Q9UFD9 1639 aa2.38□□□□□ -2.03
TRAJ49-201ENST00000390488 SLIT3O75094 1523 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 USP6P35125 1406 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 MST1RQ04912 1400 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 PLEKHG3A1L390 1219 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 ARID3CA6NKF2 412 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 SMTNL1A8MU46 457 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 POTEB2H3BUK9 544 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 CHL1O00533 1208 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 U2SURPO15042 1029 aaKnown RBP2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 FYB1O15117 783 aa2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 CTIFO43310 598 aaKnown RBP2.37□□□□□ -2.03
TRAJ49-201ENST00000390488 DHX16O60231 1041 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms