RNA–Protein interactions for RNA: ENST00000390438.2

TRAV8-4-201, Transcript of T cell receptor alpha variable 8-4, humanhuman

APPRIS P1 BASIC

Gene TRAV8-4, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4-201ENST00000390438 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
TRAV8-4-201ENST00000390438 U2AF1Q01081 240 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRAV8-4-201ENST00000390438 TEFQ10587 303 aa8.31□□□□□ -1.08
TRAV8-4-201ENST00000390438 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
TRAV8-4-201ENST00000390438 MAP3K5Q99683 1374 aa8.31□□□□□ -1.08
TRAV8-4-201ENST00000390438 MYBBP1AQ9BQG0 1328 aaKnown RBP8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 HTATSF1O43719 755 aaKnown RBP8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 ZBTB7AO95365 584 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 SSFA2P28290 1259 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 SLC52A2Q9HAB3 445 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 ATG3Q9NT62 314 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 MRC1P22897 1456 aa8.3□□□□□ -1.08
TRAV8-4-201ENST00000390438 PNPLA7Q6ZV29 1317 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 RNMTO43148 476 aaKnown RBP8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 PRKAR2BP31323 418 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 DDX10Q13206 875 aaKnown RBP8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 MTHFSDQ2M296 383 aaKnown RBP8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 VSIG10Q8N0Z9 540 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 RBM42Q9BTD8 480 aaKnown RBP8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 ASAP1Q9ULH1 1129 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 SCN11AQ9UI33 1791 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
TRAV8-4-201ENST00000390438 NFATC2IPQ8NCF5 419 aa8.28□□□□□ -1.08
TRAV8-4-201ENST00000390438 ARXQ96QS3 562 aa8.28□□□□□ -1.08
TRAV8-4-201ENST00000390438 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
TRAV8-4-201ENST00000390438 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
TRAV8-4-201ENST00000390438 TAF1LQ8IZX4 1826 aa8.28□□□□□ -1.08
TRAV8-4-201ENST00000390438 GNPATO15228 680 aa8.27□□□□□ -1.09
TRAV8-4-201ENST00000390438 LMOD3Q0VAK6 560 aa8.27□□□□□ -1.09
TRAV8-4-201ENST00000390438 WDR43Q15061 677 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAV8-4-201ENST00000390438 NPM2Q86SE8 214 aaKnown RBP8.27□□□□□ -1.09
TRAV8-4-201ENST00000390438 ATF5Q9Y2D1 282 aaPredicted RBP8.27□□□□□ -1.09
TRAV8-4-201ENST00000390438 ADAMTS7Q9UKP4 1686 aa8.27□□□□□ -1.09
TRAV8-4-201ENST00000390438 CICQ96RK0 1608 aaPredicted RBP8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 STARD3NLO95772 234 aa8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 PTGER2P43116 358 aa8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 KCNQ4P56696 695 aa8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 PNISRQ8TF01 805 aaKnown RBP8.26□□□□□ -1.09
TRAV8-4-201ENST00000390438 CEMIPQ8WUJ3 1361 aa8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 PHF14O94880 888 aa8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 RFC4P35249 363 aa8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 COL23A1Q86Y22 540 aaPredicted RBP8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 FMNL2Q96PY5 1086 aa8.25□□□□□ -1.09
TRAV8-4-201ENST00000390438 TUBGCP6Q96RT7 1819 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 UBR3Q6ZT12 1888 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 A0A087WZG4 1122 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 ZNF316A6NFI3 1004 aaPredicted RBP8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 BTBD11A6QL63 1104 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 ITPK1Q13572 414 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 SGIP1Q9BQI5 828 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 LGR6Q9HBX8 967 aa8.24□□□□□ -1.09
TRAV8-4-201ENST00000390438 COL24A1Q17RW2 1714 aa8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 CRKLP46109 303 aaKnown RBP8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 ZNF790Q6PG37 636 aa8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 SYT17Q9BSW7 474 aa8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 FHDC1Q9C0D6 1143 aaPredicted RBP8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 PDGFDQ9GZP0 370 aaPredicted RBP8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 PRKRIP1Q9H875 184 aaPredicted RBP8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 CD2APQ9Y5K6 639 aa8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 VIRMAQ69YN4 1812 aaKnown RBP8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
TRAV8-4-201ENST00000390438 HEG1Q9ULI3 1381 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 ANP32CO43423 234 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 ZPR1O75312 459 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 IL17REQ8NFR9 667 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 PHACTR3Q96KR7 559 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 BABAM1Q9NWV8 329 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 KCPQ6ZWJ8 1503 aa8.22□□□□□ -1.09
TRAV8-4-201ENST00000390438 UBR2Q8IWV8 1755 aa8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 SNRPA1P09661 255 aaKnown RBP8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 TAF7Q15545 349 aaPredicted RBP8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 DNAJC10Q8IXB1 793 aa8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 COL15A1P39059 1388 aa8.21□□□□□ -1.1
TRAV8-4-201ENST00000390438 TJP1Q07157 1748 aa8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 SIPA1L3O60292 1781 aaPredicted RBP8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 GRIN3BO60391 1043 aa8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 CYP19A1P11511 503 aaPredicted RBP8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 CALD1Q05682 793 aaKnown RBP8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 SLC39A6Q13433 755 aa8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 ARHGEF1Q92888 912 aaKnown RBP8.2□□□□□ -1.1
TRAV8-4-201ENST00000390438 RUNDC1Q96C34 613 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms