RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
MT-TS1-201ENST00000387416 AK7Q96M32 723 aa11.35□□□□□ -0.59
MT-TS1-201ENST00000387416 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
MT-TS1-201ENST00000387416 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
MT-TS1-201ENST00000387416 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
MT-TS1-201ENST00000387416 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
MT-TS1-201ENST00000387416 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
MT-TS1-201ENST00000387416 POLD1P28340 1107 aa11.34□□□□□ -0.59
MT-TS1-201ENST00000387416 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
MT-TS1-201ENST00000387416 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
MT-TS1-201ENST00000387416 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
MT-TS1-201ENST00000387416 SSFA2P28290 1259 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 PRKAR2BP31323 418 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 PTGER2P43116 358 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 RSPH6AQ9H0K4 717 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 SCN11AQ9UI33 1791 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 C5P01031 1676 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
MT-TS1-201ENST00000387416 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
MT-TS1-201ENST00000387416 MSH5O43196 834 aa11.32□□□□□ -0.6
MT-TS1-201ENST00000387416 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
MT-TS1-201ENST00000387416 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
MT-TS1-201ENST00000387416 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
MT-TS1-201ENST00000387416 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
MT-TS1-201ENST00000387416 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
MT-TS1-201ENST00000387416 ADRA2BP18089 450 aa11.31□□□□□ -0.6
MT-TS1-201ENST00000387416 TEFQ10587 303 aa11.31□□□□□ -0.6
MT-TS1-201ENST00000387416 ITPK1Q13572 414 aa11.31□□□□□ -0.6
MT-TS1-201ENST00000387416 ARXQ96QS3 562 aa11.31□□□□□ -0.6
MT-TS1-201ENST00000387416 C4BP0C0L5 1744 aa11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 PHACTR3Q96KR7 559 aa11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 MYBBP1AQ9BQG0 1328 aaKnown RBP11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 CNTNAP4Q9C0A0 1308 aa11.3□□□□□ -0.6
MT-TS1-201ENST00000387416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 GNPATO15228 680 aa11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 TTC5Q8N0Z6 440 aa11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 TEX13AQ9BXU3 409 aaPredicted RBP11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 MRC1P22897 1456 aa11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 ADAMTS7Q9UKP4 1686 aa11.29□□□□□ -0.6
MT-TS1-201ENST00000387416 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
MT-TS1-201ENST00000387416 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
MT-TS1-201ENST00000387416 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
MT-TS1-201ENST00000387416 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
MT-TS1-201ENST00000387416 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
MT-TS1-201ENST00000387416 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
MT-TS1-201ENST00000387416 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.61
MT-TS1-201ENST00000387416 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.61
MT-TS1-201ENST00000387416 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
MT-TS1-201ENST00000387416 VIRMAQ69YN4 1812 aaKnown RBP11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 STARD3NLO95772 234 aa11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 CRKLP46109 303 aaKnown RBP11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 ZNF790Q6PG37 636 aa11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 MAPK8IP3Q9UPT6 1336 aa11.26□□□□□ -0.61
MT-TS1-201ENST00000387416 CICQ96RK0 1608 aaPredicted RBP11.25□□□□□ -0.61
MT-TS1-201ENST00000387416 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
MT-TS1-201ENST00000387416 PHF14O94880 888 aa11.25□□□□□ -0.61
MT-TS1-201ENST00000387416 RFC4P35249 363 aa11.25□□□□□ -0.61
MT-TS1-201ENST00000387416 SLC39A6Q13433 755 aa11.25□□□□□ -0.61
MT-TS1-201ENST00000387416 CCDC87Q9NVE4 849 aa11.25□□□□□ -0.61
MT-TS1-201ENST00000387416 BTBD11A6QL63 1104 aa11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 CYP19A1P11511 503 aaPredicted RBP11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 NFE2L2Q16236 605 aa11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 DNAJC10Q8IXB1 793 aa11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 FMNL2Q96PY5 1086 aa11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 CD2APQ9Y5K6 639 aa11.24□□□□□ -0.61
MT-TS1-201ENST00000387416 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
MT-TS1-201ENST00000387416 MYH14Q7Z406 1995 aaKnown RBP11.23□□□□□ -0.61
MT-TS1-201ENST00000387416 A0A087WZG4 1122 aa11.23□□□□□ -0.61
MT-TS1-201ENST00000387416 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
MT-TS1-201ENST00000387416 INTS5Q6P9B9 1019 aaKnown RBP11.23□□□□□ -0.61
MT-TS1-201ENST00000387416 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
MT-TS1-201ENST00000387416 LMOD3Q0VAK6 560 aa11.22□□□□□ -0.61
MT-TS1-201ENST00000387416 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
MT-TS1-201ENST00000387416 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
MT-TS1-201ENST00000387416 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
MT-TS1-201ENST00000387416 ZNF496Q96IT1 587 aaPredicted RBP11.22□□□□□ -0.61
MT-TS1-201ENST00000387416 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
MT-TS1-201ENST00000387416 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
MT-TS1-201ENST00000387416 ZPR1O75312 459 aa11.21□□□□□ -0.61
MT-TS1-201ENST00000387416 MCM10Q7L590 875 aa11.21□□□□□ -0.61
MT-TS1-201ENST00000387416 BABAM1Q9NWV8 329 aa11.21□□□□□ -0.61
MT-TS1-201ENST00000387416 SIPA1L3O60292 1781 aaPredicted RBP11.21□□□□□ -0.62
MT-TS1-201ENST00000387416 UBR2Q8IWV8 1755 aa11.21□□□□□ -0.62
MT-TS1-201ENST00000387416 SOS1Q07889 1333 aaPredicted RBP11.2□□□□□ -0.62
MT-TS1-201ENST00000387416 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
MT-TS1-201ENST00000387416 GYS1P13807 737 aa11.2□□□□□ -0.62
MT-TS1-201ENST00000387416 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
MT-TS1-201ENST00000387416 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms