RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 BMP2KLQ5H9B9 411 aa31.26■■■□□ 2.6
NDEL1-202ENST00000380025 CADPS2Q86UW7 1296 aa31.26■■■□□ 2.6
NDEL1-202ENST00000380025 ZC3H6P61129 1189 aaKnown RBP31.26■■■□□ 2.59
NDEL1-202ENST00000380025 XIRP1Q702N8 1843 aaKnown RBP31.26■■■□□ 2.59
NDEL1-202ENST00000380025 ERBB3P21860 1342 aa31.25■■■□□ 2.59
NDEL1-202ENST00000380025 EIF4A1P60842 406 aaKnown RBP31.24■■■□□ 2.59
NDEL1-202ENST00000380025 FKBP5Q13451 457 aaPredicted RBP31.24■■■□□ 2.59
NDEL1-202ENST00000380025 MPRIPQ6WCQ1 1025 aa31.23■■■□□ 2.59
NDEL1-202ENST00000380025 OVOS2A0A0G2JMS6 1433 aa31.23■■■□□ 2.59
NDEL1-202ENST00000380025 NPHP3Q7Z494 1330 aa31.23■■■□□ 2.59
NDEL1-202ENST00000380025 HDGFL1Q5TGJ6 251 aa31.23■■■□□ 2.59
NDEL1-202ENST00000380025 TEFQ10587 303 aa31.22■■■□□ 2.59
NDEL1-202ENST00000380025 COL18A1P39060 1754 aa31.21■■■□□ 2.59
NDEL1-202ENST00000380025 C1orf141Q5JVX7 400 aa31.21■■■□□ 2.59
NDEL1-202ENST00000380025 TNS3Q68CZ2 1445 aa31.21■■■□□ 2.59
NDEL1-202ENST00000380025 CRYBG1Q9Y4K1 1723 aa31.21■■■□□ 2.59
NDEL1-202ENST00000380025 RNMTO43148 476 aaKnown RBP31.2■■■□□ 2.59
NDEL1-202ENST00000380025 MFAP1P55081 439 aaKnown RBP31.2■■■□□ 2.59
NDEL1-202ENST00000380025 PXDNLA1KZ92 1463 aa31.2■■■□□ 2.58
NDEL1-202ENST00000380025 HOXB7P09629 217 aa31.19■■■□□ 2.58
NDEL1-202ENST00000380025 LMTK3Q96Q04 1460 aa31.19■■■□□ 2.58
NDEL1-202ENST00000380025 KCNQ3O43525 872 aa31.19■■■□□ 2.58
NDEL1-202ENST00000380025 ADAMTS7Q9UKP4 1686 aa31.18■■■□□ 2.58
NDEL1-202ENST00000380025 BTBD11A6QL63 1104 aa31.17■■■□□ 2.58
NDEL1-202ENST00000380025 SIPA1L3O60292 1781 aaPredicted RBP31.17■■■□□ 2.58
NDEL1-202ENST00000380025 C22orf23Q9BZE7 217 aa31.17■■■□□ 2.58
NDEL1-202ENST00000380025 STRCQ7RTU9 1775 aa31.17■■■□□ 2.58
NDEL1-202ENST00000380025 PLEKHM2Q8IWE5 1019 aa31.15■■■□□ 2.58
NDEL1-202ENST00000380025 PHAXQ9H814 394 aaKnown RBP31.15■■■□□ 2.58
NDEL1-202ENST00000380025 GNAI2P04899 355 aa31.14■■■□□ 2.58
NDEL1-202ENST00000380025 BECN1Q14457 450 aa31.14■■■□□ 2.58
NDEL1-202ENST00000380025 CABLES1Q8TDN4 633 aa31.13■■■□□ 2.57
NDEL1-202ENST00000380025 HMMRO75330 724 aa31.13■■■□□ 2.57
NDEL1-202ENST00000380025 EIF2S2P20042 333 aaKnown RBP31.13■■■□□ 2.57
NDEL1-202ENST00000380025 SPATA31A3Q5VYP0 1347 aa31.13■■■□□ 2.57
NDEL1-202ENST00000380025 ABCC6O95255 1503 aa31.12■■■□□ 2.57
NDEL1-202ENST00000380025 GNAI3P08754 354 aa31.12■■■□□ 2.57
NDEL1-202ENST00000380025 C16orf71Q8IYS4 520 aaPredicted RBP31.1■■■□□ 2.57
NDEL1-202ENST00000380025 NLRP2Q9NX02 1062 aa31.1■■■□□ 2.57
NDEL1-202ENST00000380025 CHPF2Q9P2E5 772 aa31.1■■■□□ 2.57
NDEL1-202ENST00000380025 GSPT1P15170 499 aaKnown RBP31.09■■■□□ 2.57
NDEL1-202ENST00000380025 CHMP4AQ9BY43 222 aa31.09■■■□□ 2.57
NDEL1-202ENST00000380025 RTL5Q5HYW3 569 aaPredicted RBP31.09■■■□□ 2.57
NDEL1-202ENST00000380025 HEG1Q9ULI3 1381 aa31.08■■■□□ 2.57
NDEL1-202ENST00000380025 RAPGEF4Q8WZA2 1011 aa31.07■■■□□ 2.57
NDEL1-202ENST00000380025 SMARCA5O60264 1052 aaPredicted RBP31.07■■■□□ 2.56
NDEL1-202ENST00000380025 BRINP3Q76B58 766 aa31.07■■■□□ 2.56
NDEL1-202ENST00000380025 KDM4FA0A1W2PPD8 638 aa31.06■■■□□ 2.56
NDEL1-202ENST00000380025 TBC1D9Q6ZT07 1266 aa31.06■■■□□ 2.56
NDEL1-202ENST00000380025 OTUD7AQ8TE49 926 aaPredicted RBP31.06■■■□□ 2.56
NDEL1-202ENST00000380025 MEGF6O75095 1541 aa31.06■■■□□ 2.56
NDEL1-202ENST00000380025 SCN11AQ9UI33 1791 aa31.06■■■□□ 2.56
NDEL1-202ENST00000380025 TTC22Q5TAA0 569 aa31.06■■■□□ 2.56
NDEL1-202ENST00000380025 APBB1O00213 710 aa31.05■■■□□ 2.56
NDEL1-202ENST00000380025 TBC1D2Q9BYX2 928 aa31.05■■■□□ 2.56
NDEL1-202ENST00000380025 USP44Q9H0E7 712 aa31.05■■■□□ 2.56
NDEL1-202ENST00000380025 CHRNA2Q15822 529 aa31.05■■■□□ 2.56
NDEL1-202ENST00000380025 CPDO75976 1380 aa31.04■■■□□ 2.56
NDEL1-202ENST00000380025 RBM25P49756 843 aaKnown RBP31.04■■■□□ 2.56
NDEL1-202ENST00000380025 USP35Q9P2H5 1018 aa31.03■■■□□ 2.56
NDEL1-202ENST00000380025 GIGYF1O75420 1035 aaPredicted RBP31.03■■■□□ 2.56
NDEL1-202ENST00000380025 BCL11AQ9H165 835 aa31.03■■■□□ 2.56
NDEL1-202ENST00000380025 KDM6AO15550 1401 aaPredicted RBP31.02■■■□□ 2.56
NDEL1-202ENST00000380025 TATP17735 454 aaPredicted RBP31.02■■■□□ 2.56
NDEL1-202ENST00000380025 ATP8B2P98198 1209 aa31.02■■■□□ 2.56
NDEL1-202ENST00000380025 LRRFIP2Q9Y608 721 aaKnown RBP31.02■■■□□ 2.56
NDEL1-202ENST00000380025 CDC45O75419 566 aa31.02■■■□□ 2.56
NDEL1-202ENST00000380025 PNMA6EA0A0J9YXQ4 647 aa31.01■■■□□ 2.55
NDEL1-202ENST00000380025 CSB-PGBD3P0DP91 1061 aa31.01■■■□□ 2.55
NDEL1-202ENST00000380025 ANXA1P04083 346 aa31■■■□□ 2.55
NDEL1-202ENST00000380025 SRCIN1Q9C0H9 1055 aa31■■■□□ 2.55
NDEL1-202ENST00000380025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31■■■□□ 2.554e-8■□□□□ 10.7
NDEL1-202ENST00000380025 DBF4Q9UBU7 674 aaPredicted RBP31■■■□□ 2.55
NDEL1-202ENST00000380025 PLEKHG2Q9H7P9 1386 aa30.99■■■□□ 2.55
NDEL1-202ENST00000380025 UBTFL1P0CB47 393 aaPredicted RBP30.99■■■□□ 2.55
NDEL1-202ENST00000380025 SPG7Q9UQ90 795 aa30.99■■■□□ 2.55
NDEL1-202ENST00000380025 PHKG2P15735 406 aa30.99■■■□□ 2.55
NDEL1-202ENST00000380025 DNAAF4Q8WXU2 420 aa30.99■■■□□ 2.55
NDEL1-202ENST00000380025 ZNF335Q9H4Z2 1342 aaPredicted RBP30.99■■■□□ 2.55
NDEL1-202ENST00000380025 PKD1L3Q7Z443 1732 aa30.98■■■□□ 2.55
NDEL1-202ENST00000380025 PI4KAP2A4QPH2 592 aa30.98■■■□□ 2.55
NDEL1-202ENST00000380025 PI4KAP1Q8N8J0 262 aa30.98■■■□□ 2.55
NDEL1-202ENST00000380025 EXOC6BQ9Y2D4 811 aa30.98■■■□□ 2.55
NDEL1-202ENST00000380025 ADCY9O60503 1353 aa30.98■■■□□ 2.55
NDEL1-202ENST00000380025 NFKBIBQ15653 356 aa30.97■■■□□ 2.55
NDEL1-202ENST00000380025 BEND3Q5T5X7 828 aa30.97■■■□□ 2.55
NDEL1-202ENST00000380025 PRAMEF22A3QJZ6 481 aa30.96■■■□□ 2.55
NDEL1-202ENST00000380025 SLC52A2Q9HAB3 445 aa30.95■■■□□ 2.55
NDEL1-202ENST00000380025 IBTKQ9P2D0 1353 aaPredicted RBP30.94■■■□□ 2.54
NDEL1-202ENST00000380025 PROSER3Q2NL68 480 aa30.94■■■□□ 2.54
NDEL1-202ENST00000380025 SOS2Q07890 1332 aaPredicted RBP30.93■■■□□ 2.54
NDEL1-202ENST00000380025 IFNL2Q8IZJ0 200 aa30.93■■■□□ 2.54
NDEL1-202ENST00000380025 SLAIN2Q9P270 581 aa30.93■■■□□ 2.54
NDEL1-202ENST00000380025 OSBPL3Q9H4L5 887 aa30.93■■■□□ 2.54
NDEL1-202ENST00000380025 C5P01031 1676 aa30.92■■■□□ 2.54
NDEL1-202ENST00000380025 MRC1P22897 1456 aa30.92■■■□□ 2.54
NDEL1-202ENST00000380025 SDSP20132 328 aa30.92■■■□□ 2.54
NDEL1-202ENST00000380025 ZNF790Q6PG37 636 aa30.92■■■□□ 2.54
NDEL1-202ENST00000380025 LRRCC1Q9C099 1032 aa30.92■■■□□ 2.54
NDEL1-202ENST00000380025 ANTXR1Q9H6X2 564 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms