RNA–Protein interactions for RNA: ENST00000379316.3

PDCD5-202, Transcript of programmed cell death 5, humanhuman

TSL 1 (best) BASIC

Gene PDCD5, Length 154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-202ENST00000379316 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
PDCD5-202ENST00000379316 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
PDCD5-202ENST00000379316 AKAP4Q5JQC9 854 aa18.68■□□□□ 0.58
PDCD5-202ENST00000379316 CFAP53Q96M91 514 aa18.68■□□□□ 0.58
PDCD5-202ENST00000379316 SSFA2P28290 1259 aa18.67■□□□□ 0.58
PDCD5-202ENST00000379316 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
PDCD5-202ENST00000379316 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
PDCD5-202ENST00000379316 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
PDCD5-202ENST00000379316 HMOX1P09601 288 aa18.66■□□□□ 0.58
PDCD5-202ENST00000379316 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
PDCD5-202ENST00000379316 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
PDCD5-202ENST00000379316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
PDCD5-202ENST00000379316 GNPATO15228 680 aa18.64■□□□□ 0.57
PDCD5-202ENST00000379316 PHF14O94880 888 aa18.64■□□□□ 0.57
PDCD5-202ENST00000379316 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.57
PDCD5-202ENST00000379316 LINC00116Q8NCU8 138 aa18.64■□□□□ 0.57
PDCD5-202ENST00000379316 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
PDCD5-202ENST00000379316 ITPK1Q13572 414 aa18.63■□□□□ 0.57
PDCD5-202ENST00000379316 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
PDCD5-202ENST00000379316 YY1P25490 414 aa18.62■□□□□ 0.57
PDCD5-202ENST00000379316 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
PDCD5-202ENST00000379316 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
PDCD5-202ENST00000379316 MSL1Q68DK7 614 aa18.61■□□□□ 0.57
PDCD5-202ENST00000379316 RTCBQ9Y3I0 505 aaKnown RBP18.61■□□□□ 0.57
PDCD5-202ENST00000379316 COL5A3P25940 1745 aaPredicted RBP18.6■□□□□ 0.57
PDCD5-202ENST00000379316 CNTNAP4Q9C0A0 1308 aa18.6■□□□□ 0.57
PDCD5-202ENST00000379316 ADRA2BP18089 450 aa18.6■□□□□ 0.57
PDCD5-202ENST00000379316 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
PDCD5-202ENST00000379316 MRC1P22897 1456 aa18.59■□□□□ 0.57
PDCD5-202ENST00000379316 GAS2L2Q8NHY3 880 aa18.59■□□□□ 0.57
PDCD5-202ENST00000379316 CICQ96RK0 1608 aaPredicted RBP18.59■□□□□ 0.57
PDCD5-202ENST00000379316 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.57
PDCD5-202ENST00000379316 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
PDCD5-202ENST00000379316 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
PDCD5-202ENST00000379316 GPR162Q16538 588 aa18.58■□□□□ 0.56
PDCD5-202ENST00000379316 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
PDCD5-202ENST00000379316 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.56
PDCD5-202ENST00000379316 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
PDCD5-202ENST00000379316 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
PDCD5-202ENST00000379316 CD2APQ9Y5K6 639 aa18.57■□□□□ 0.56
PDCD5-202ENST00000379316 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
PDCD5-202ENST00000379316 SLC4A9Q96Q91 983 aa18.56■□□□□ 0.56
PDCD5-202ENST00000379316 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
PDCD5-202ENST00000379316 RPS6KA4O75676 772 aa18.55■□□□□ 0.56
PDCD5-202ENST00000379316 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
PDCD5-202ENST00000379316 RFC4P35249 363 aa18.54■□□□□ 0.56
PDCD5-202ENST00000379316 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
PDCD5-202ENST00000379316 CHD4Q14839 1912 aa18.53■□□□□ 0.56
PDCD5-202ENST00000379316 TJP1Q07157 1748 aa18.53■□□□□ 0.56
PDCD5-202ENST00000379316 TEFQ10587 303 aa18.53■□□□□ 0.56
PDCD5-202ENST00000379316 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
PDCD5-202ENST00000379316 NLGN2Q8NFZ4 835 aa18.53■□□□□ 0.56
PDCD5-202ENST00000379316 GRIN3BO60391 1043 aa18.52■□□□□ 0.56
PDCD5-202ENST00000379316 U2AF1L5P0DN76 240 aaPredicted RBP18.52■□□□□ 0.56
PDCD5-202ENST00000379316 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.56
PDCD5-202ENST00000379316 U2AF1Q01081 240 aaKnown RBP eCLIP18.52■□□□□ 0.56
PDCD5-202ENST00000379316 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
PDCD5-202ENST00000379316 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
PDCD5-202ENST00000379316 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
PDCD5-202ENST00000379316 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
PDCD5-202ENST00000379316 FCHSD2O94868 740 aa18.5■□□□□ 0.55
PDCD5-202ENST00000379316 NEFMP07197 916 aa18.5■□□□□ 0.55
PDCD5-202ENST00000379316 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
PDCD5-202ENST00000379316 RSPH6AQ9H0K4 717 aa18.5■□□□□ 0.55
PDCD5-202ENST00000379316 MMP10P09238 476 aa18.49■□□□□ 0.55
PDCD5-202ENST00000379316 MYH14Q7Z406 1995 aaKnown RBP18.49■□□□□ 0.55
PDCD5-202ENST00000379316 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
PDCD5-202ENST00000379316 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
PDCD5-202ENST00000379316 UBR2Q8IWV8 1755 aa18.48■□□□□ 0.55
PDCD5-202ENST00000379316 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
PDCD5-202ENST00000379316 CCDC87Q9NVE4 849 aa18.48■□□□□ 0.55
PDCD5-202ENST00000379316 DNAJC10Q8IXB1 793 aa18.47■□□□□ 0.55
PDCD5-202ENST00000379316 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
PDCD5-202ENST00000379316 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
PDCD5-202ENST00000379316 STARD3NLO95772 234 aa18.46■□□□□ 0.55
PDCD5-202ENST00000379316 GYS1P13807 737 aa18.46■□□□□ 0.55
PDCD5-202ENST00000379316 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
PDCD5-202ENST00000379316 PHACTR3Q96KR7 559 aa18.46■□□□□ 0.55
PDCD5-202ENST00000379316 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
PDCD5-202ENST00000379316 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
PDCD5-202ENST00000379316 ZPR1O75312 459 aa18.45■□□□□ 0.54
PDCD5-202ENST00000379316 CYP19A1P11511 503 aaPredicted RBP18.45■□□□□ 0.54
PDCD5-202ENST00000379316 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
PDCD5-202ENST00000379316 ZNF790Q6PG37 636 aa18.45■□□□□ 0.54
PDCD5-202ENST00000379316 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
PDCD5-202ENST00000379316 PARP3Q9Y6F1 533 aa18.45■□□□□ 0.54
PDCD5-202ENST00000379316 USP42Q9H9J4 1324 aaKnown RBP18.45■□□□□ 0.54
PDCD5-202ENST00000379316 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
PDCD5-202ENST00000379316 RALBP1Q15311 655 aa18.43■□□□□ 0.54
PDCD5-202ENST00000379316 KIF13BQ9NQT8 1826 aa18.43■□□□□ 0.54
PDCD5-202ENST00000379316 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
PDCD5-202ENST00000379316 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■□□□□ 10.9
PDCD5-202ENST00000379316 TGFB2P61812 414 aa18.42■□□□□ 0.54
PDCD5-202ENST00000379316 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
PDCD5-202ENST00000379316 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
PDCD5-202ENST00000379316 BTBD11A6QL63 1104 aa18.41■□□□□ 0.54
PDCD5-202ENST00000379316 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
PDCD5-202ENST00000379316 COL15A1P39059 1388 aa18.41■□□□□ 0.54
PDCD5-202ENST00000379316 C10orf71Q711Q0 1435 aa18.4■□□□□ 0.54
PDCD5-202ENST00000379316 A0A087WZG4 1122 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms