RNA–Protein interactions for RNA: ENST00000378764.6

OPTN-206, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OPTN, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-206ENST00000378764 XPCQ01831 940 aaPredicted RBP13.41□□□□□ -0.26
OPTN-206ENST00000378764 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
OPTN-206ENST00000378764 COL16A1Q07092 1604 aaPredicted RBP13.41□□□□□ -0.26
OPTN-206ENST00000378764 NHSL1Q5SYE7 1610 aa13.41□□□□□ -0.26
OPTN-206ENST00000378764 APBB1O00213 710 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 GAS2L2Q8NHY3 880 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 UPF2Q9HAU5 1272 aaKnown RBP13.4□□□□□ -0.26
OPTN-206ENST00000378764 F6X3S4 739 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 PSME1Q06323 249 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
OPTN-206ENST00000378764 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
OPTN-206ENST00000378764 JCADQ9P266 1359 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
OPTN-206ENST00000378764 UBE2Q2Q8WVN8 375 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 CHMP4BQ9H444 224 aaKnown RBP13.39□□□□□ -0.27
OPTN-206ENST00000378764 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 MEIS3Q99687 375 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 SLC24A3Q9HC58 644 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 LTN1O94822 1766 aa13.39□□□□□ -0.27
OPTN-206ENST00000378764 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
OPTN-206ENST00000378764 TBC1D2Q9BYX2 928 aa13.38□□□□□ -0.27
OPTN-206ENST00000378764 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
OPTN-206ENST00000378764 SLKQ9H2G2 1235 aaPredicted RBP13.38□□□□□ -0.27
OPTN-206ENST00000378764 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 SLC4A10Q6U841 1118 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
OPTN-206ENST00000378764 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 PTPRCP08575 1304 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 FRAT2O75474 233 aaPredicted RBP13.37□□□□□ -0.27
OPTN-206ENST00000378764 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 ADGRL3Q9HAR2 1447 aa13.37□□□□□ -0.27
OPTN-206ENST00000378764 IP6K1Q92551 441 aa13.36□□□□□ -0.27
OPTN-206ENST00000378764 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
OPTN-206ENST00000378764 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
OPTN-206ENST00000378764 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
OPTN-206ENST00000378764 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
OPTN-206ENST00000378764 NFAT5O94916 1531 aa13.36□□□□□ -0.27
OPTN-206ENST00000378764 RBM25P49756 843 aaKnown RBP13.35□□□□□ -0.27
OPTN-206ENST00000378764 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 BECN1Q14457 450 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 ANKRD44Q8N8A2 993 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
OPTN-206ENST00000378764 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
OPTN-206ENST00000378764 HTATSF1O43719 755 aaKnown RBP13.34□□□□□ -0.27
OPTN-206ENST00000378764 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
OPTN-206ENST00000378764 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
OPTN-206ENST00000378764 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
OPTN-206ENST00000378764 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
OPTN-206ENST00000378764 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
OPTN-206ENST00000378764 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
OPTN-206ENST00000378764 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
OPTN-206ENST00000378764 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
OPTN-206ENST00000378764 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
OPTN-206ENST00000378764 FLIIQ13045 1269 aa13.32□□□□□ -0.28
OPTN-206ENST00000378764 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
OPTN-206ENST00000378764 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
OPTN-206ENST00000378764 GCP02774 474 aa13.31□□□□□ -0.28
OPTN-206ENST00000378764 STK31Q9BXU1 1019 aa13.31□□□□□ -0.28
OPTN-206ENST00000378764 SLAIN2Q9P270 581 aa13.31□□□□□ -0.28
OPTN-206ENST00000378764 KCNQ3O43525 872 aa13.31□□□□□ -0.28
OPTN-206ENST00000378764 FKBP5Q13451 457 aaPredicted RBP13.31□□□□□ -0.28
OPTN-206ENST00000378764 CCDC30Q5VVM6 783 aa13.3□□□□□ -0.28
OPTN-206ENST00000378764 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
OPTN-206ENST00000378764 KIF1AQ12756 1690 aa13.3□□□□□ -0.28
OPTN-206ENST00000378764 FAM208AQ9UK61 1670 aaKnown RBP13.3□□□□□ -0.28
OPTN-206ENST00000378764 PROM2Q8N271 834 aa13.3□□□□□ -0.28
OPTN-206ENST00000378764 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
OPTN-206ENST00000378764 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
OPTN-206ENST00000378764 ATF3P18847 181 aa13.29□□□□□ -0.28
OPTN-206ENST00000378764 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
OPTN-206ENST00000378764 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
OPTN-206ENST00000378764 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
OPTN-206ENST00000378764 KIF2CQ99661 725 aa13.29□□□□□ -0.28
OPTN-206ENST00000378764 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
OPTN-206ENST00000378764 MST1RQ04912 1400 aa13.28□□□□□ -0.28
OPTN-206ENST00000378764 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
OPTN-206ENST00000378764 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
OPTN-206ENST00000378764 EIF2S2P20042 333 aaKnown RBP13.28□□□□□ -0.28
OPTN-206ENST00000378764 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
OPTN-206ENST00000378764 KRT28Q7Z3Y7 464 aa13.28□□□□□ -0.28
OPTN-206ENST00000378764 NKX1-1Q15270 411 aaPredicted RBP13.27□□□□□ -0.29
OPTN-206ENST00000378764 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
OPTN-206ENST00000378764 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
OPTN-206ENST00000378764 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
OPTN-206ENST00000378764 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
OPTN-206ENST00000378764 PNMA6EA0A0J9YXQ4 647 aa13.26□□□□□ -0.29
OPTN-206ENST00000378764 CD2BP2O95400 341 aaKnown RBP13.26□□□□□ -0.29
OPTN-206ENST00000378764 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
OPTN-206ENST00000378764 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
OPTN-206ENST00000378764 PXDNQ92626 1479 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms