RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
SSU72-204ENST00000378726 INTS3Q68E01 1043 aaKnown RBP24.49■■□□□ 1.51
SSU72-204ENST00000378726 G2E3Q7L622 706 aa24.49■■□□□ 1.51
SSU72-204ENST00000378726 NECTIN2Q92692 538 aa24.49■■□□□ 1.51
SSU72-204ENST00000378726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.49■■□□□ 1.512e-6■□□□□ 10.3
SSU72-204ENST00000378726 KCNQ3O43525 872 aa24.47■■□□□ 1.51
SSU72-204ENST00000378726 PDZRN3Q9UPQ7 1066 aa24.46■■□□□ 1.51
SSU72-204ENST00000378726 RGS12O14924 1447 aa24.45■■□□□ 1.5
SSU72-204ENST00000378726 PHKG2P15735 406 aa24.45■■□□□ 1.5
SSU72-204ENST00000378726 C8orf34Q49A92 452 aa24.45■■□□□ 1.5
SSU72-204ENST00000378726 TOM1L2Q6ZVM7 507 aa24.45■■□□□ 1.5
SSU72-204ENST00000378726 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
SSU72-204ENST00000378726 WDR17Q8IZU2 1322 aa24.44■■□□□ 1.5
SSU72-204ENST00000378726 MEGF6O75095 1541 aa24.44■■□□□ 1.5
SSU72-204ENST00000378726 IFNL2Q8IZJ0 200 aa24.44■■□□□ 1.5
SSU72-204ENST00000378726 OVOS2A0A0G2JMS6 1433 aa24.44■■□□□ 1.5
SSU72-204ENST00000378726 FAM208AQ9UK61 1670 aaKnown RBP24.44■■□□□ 1.5
SSU72-204ENST00000378726 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
SSU72-204ENST00000378726 FAM161AQ3B820 660 aa24.43■■□□□ 1.5
SSU72-204ENST00000378726 HDGFL1Q5TGJ6 251 aa24.43■■□□□ 1.5
SSU72-204ENST00000378726 C1orf115Q9H7X2 142 aa24.43■■□□□ 1.5
SSU72-204ENST00000378726 EIF2S2P20042 333 aaKnown RBP24.42■■□□□ 1.5
SSU72-204ENST00000378726 FLIIQ13045 1269 aa24.42■■□□□ 1.5
SSU72-204ENST00000378726 HOXB7P09629 217 aa24.41■■□□□ 1.5
SSU72-204ENST00000378726 F6X3S4 739 aa24.41■■□□□ 1.5
SSU72-204ENST00000378726 EVA1CP58658 441 aa24.41■■□□□ 1.5
SSU72-204ENST00000378726 SMC5Q8IY18 1101 aa24.4■■□□□ 1.5
SSU72-204ENST00000378726 CHMP4AQ9BY43 222 aa24.4■■□□□ 1.5
SSU72-204ENST00000378726 SLC4A10Q6U841 1118 aa24.39■■□□□ 1.5
SSU72-204ENST00000378726 PLEKHG2Q9H7P9 1386 aa24.39■■□□□ 1.49
SSU72-204ENST00000378726 CYP27B1O15528 508 aa24.39■■□□□ 1.49
SSU72-204ENST00000378726 FKBP5Q13451 457 aaPredicted RBP24.39■■□□□ 1.49
SSU72-204ENST00000378726 STRN4Q9NRL3 753 aa24.39■■□□□ 1.49
SSU72-204ENST00000378726 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
SSU72-204ENST00000378726 LTBP4Q8N2S1 1624 aa24.38■■□□□ 1.49
SSU72-204ENST00000378726 SLC52A2Q9HAB3 445 aa24.38■■□□□ 1.49
SSU72-204ENST00000378726 NFATC2IPQ8NCF5 419 aa24.37■■□□□ 1.49
SSU72-204ENST00000378726 CARD10Q9BWT7 1032 aa24.37■■□□□ 1.49
SSU72-204ENST00000378726 KDM3BQ7LBC6 1761 aa24.37■■□□□ 1.49
SSU72-204ENST00000378726 CCT4P50991 539 aaKnown RBP24.37■■□□□ 1.49
SSU72-204ENST00000378726 DCAF5Q96JK2 942 aa24.37■■□□□ 1.49
SSU72-204ENST00000378726 LARP1Q6PKG0 1096 aaKnown RBP24.36■■□□□ 1.49
SSU72-204ENST00000378726 SIRT2Q8IXJ6 389 aa24.36■■□□□ 1.49
SSU72-204ENST00000378726 KDM6AO15550 1401 aaPredicted RBP24.35■■□□□ 1.49
SSU72-204ENST00000378726 GIGYF1O75420 1035 aaPredicted RBP24.35■■□□□ 1.49
SSU72-204ENST00000378726 HSP90AB1P08238 724 aaKnown RBP24.35■■□□□ 1.49
SSU72-204ENST00000378726 PHAXQ9H814 394 aaKnown RBP24.35■■□□□ 1.49
SSU72-204ENST00000378726 ZCRB1Q8TBF4 217 aaKnown RBP24.34■■□□□ 1.49
SSU72-204ENST00000378726 ABCA3Q99758 1704 aa24.34■■□□□ 1.49
SSU72-204ENST00000378726 ROBO1Q9Y6N7 1651 aa24.34■■□□□ 1.49
SSU72-204ENST00000378726 MEIS3Q99687 375 aa24.33■■□□□ 1.49
SSU72-204ENST00000378726 CHPF2Q9P2E5 772 aa24.33■■□□□ 1.49
SSU72-204ENST00000378726 ADAMTS7Q9UKP4 1686 aa24.33■■□□□ 1.49
SSU72-204ENST00000378726 HEG1Q9ULI3 1381 aa24.33■■□□□ 1.48
SSU72-204ENST00000378726 SLC39A6Q13433 755 aa24.33■■□□□ 1.48
SSU72-204ENST00000378726 ZNF790Q6PG37 636 aa24.33■■□□□ 1.48
SSU72-204ENST00000378726 VIRMAQ69YN4 1812 aaKnown RBP24.32■■□□□ 1.48
SSU72-204ENST00000378726 NFKBIBQ15653 356 aa24.32■■□□□ 1.48
SSU72-204ENST00000378726 IL2RBP14784 551 aa24.31■■□□□ 1.48
SSU72-204ENST00000378726 IL27Q8NEV9 243 aa24.31■■□□□ 1.48
SSU72-204ENST00000378726 GCC1Q96CN9 775 aa24.31■■□□□ 1.48
SSU72-204ENST00000378726 BTG4Q9NY30 223 aa24.31■■□□□ 1.48
SSU72-204ENST00000378726 DAXXQ9UER7 740 aaPredicted RBP24.31■■□□□ 1.48
SSU72-204ENST00000378726 NUCB1Q02818 461 aa24.3■■□□□ 1.48
SSU72-204ENST00000378726 CACNA1FO60840 1977 aa24.3■■□□□ 1.48
SSU72-204ENST00000378726 PRAMEF22A3QJZ6 481 aa24.3■■□□□ 1.48
SSU72-204ENST00000378726 RPAP2Q8IXW5 612 aaPredicted RBP24.29■■□□□ 1.48
SSU72-204ENST00000378726 DBF4Q9UBU7 674 aaPredicted RBP24.29■■□□□ 1.48
SSU72-204ENST00000378726 CABP4P57796 275 aa24.29■■□□□ 1.48
SSU72-204ENST00000378726 SIPA1L3O60292 1781 aaPredicted RBP24.28■■□□□ 1.48
SSU72-204ENST00000378726 ANXA1P04083 346 aa24.28■■□□□ 1.48
SSU72-204ENST00000378726 ANKRD44Q8N8A2 993 aa24.28■■□□□ 1.48
SSU72-204ENST00000378726 PCDH11XQ9BZA7 1347 aa24.28■■□□□ 1.48
SSU72-204ENST00000378726 PCDH11YQ9BZA8 1340 aa24.28■■□□□ 1.48
SSU72-204ENST00000378726 SCN11AQ9UI33 1791 aa24.28■■□□□ 1.48
SSU72-204ENST00000378726 AHDC1Q5TGY3 1603 aaPredicted RBP24.27■■□□□ 1.48
SSU72-204ENST00000378726 PKD1L3Q7Z443 1732 aa24.27■■□□□ 1.48
SSU72-204ENST00000378726 ANKRD45Q5TZF3 282 aa24.27■■□□□ 1.48
SSU72-204ENST00000378726 CHD1LQ86WJ1 897 aa24.27■■□□□ 1.48
SSU72-204ENST00000378726 CEP85Q6P2H3 762 aa24.26■■□□□ 1.47
SSU72-204ENST00000378726 DDX54Q8TDD1 881 aaKnown RBP24.26■■□□□ 1.47
SSU72-204ENST00000378726 LNPKQ9C0E8 428 aa24.26■■□□□ 1.47
SSU72-204ENST00000378726 TTC5Q8N0Z6 440 aa24.25■■□□□ 1.47
SSU72-204ENST00000378726 TOM1O60784 492 aa24.24■■□□□ 1.47
SSU72-204ENST00000378726 DCTPP1Q9H773 170 aa24.24■■□□□ 1.47
SSU72-204ENST00000378726 PI4KAP2A4QPH2 592 aa24.23■■□□□ 1.47
SSU72-204ENST00000378726 PI4KAP1Q8N8J0 262 aa24.23■■□□□ 1.47
SSU72-204ENST00000378726 ZNF496Q96IT1 587 aaPredicted RBP24.23■■□□□ 1.47
SSU72-204ENST00000378726 GNAI2P04899 355 aa24.23■■□□□ 1.47
SSU72-204ENST00000378726 GNAI3P08754 354 aa24.23■■□□□ 1.47
SSU72-204ENST00000378726 PRKCSHP14314 528 aaPredicted RBP24.23■■□□□ 1.47
SSU72-204ENST00000378726 ATP10DQ9P241 1426 aa24.23■■□□□ 1.47
SSU72-204ENST00000378726 PIP4K2BP78356 416 aa24.22■■□□□ 1.47
SSU72-204ENST00000378726 NKX1-1Q15270 411 aaPredicted RBP24.22■■□□□ 1.47
SSU72-204ENST00000378726 PROSER3Q2NL68 480 aa24.22■■□□□ 1.47
SSU72-204ENST00000378726 GSE1Q14687 1217 aa24.22■■□□□ 1.47
SSU72-204ENST00000378726 PARP4Q9UKK3 1724 aaKnown RBP24.21■■□□□ 1.47
SSU72-204ENST00000378726 ERVV-2B6SEH9 535 aa24.21■■□□□ 1.47
SSU72-204ENST00000378726 DNAAF4Q8WXU2 420 aa24.21■■□□□ 1.47
SSU72-204ENST00000378726 HYPKQ9NX55 129 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms